2H9X | Genus

Total Genus 5

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	5
sequence length	47
structure length	46
Chain Sequence	GVCRCDSDGPSVHGNTLSGTVWVGSCASGWHKCNDEYNIAYECCKQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 46 atoms

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1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

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46 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Toxin
publication title	CgNa, a type I toxin from the giant Caribbean sea anemone Condylactis gigantea shows structural similarities to both type I and II toxins, as well as distinctive structural and functional properties(1). pubmed doi rcsb
molecule keywords	Toxin CgNa
total genus	5
structure length	46
sequence length	47
ec nomenclature
pdb deposition date	2006-06-12

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00706	Toxin_4	Anenome neurotoxin

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.20.10	Mainly Beta	Single Sheet	Anthopleurin-A	Anthopleurin-A	2h9xA00

2MUBA 1SH1A 1D6BA 2RNGA 1AHLA 1ZLIB 2K2XA 1H5OA 1WXNA 1BDSA 1ZUEA 3D4UB 3LMSB 1SHIA 2BDSA 1WQKA 1ZUFA 1APFA 1ZLHB 4GV5A 1ATXA 1B8WA 1Z99A 2H9XA 2SH1A 2MN3A 2JTOA
chains in the Genus database with same CATH superfamily

2MUBA 1SH1A 1D6BA 2HJ9C 2RNGA 1AHLA 1GKUB 1ZLIB 2QSFA 3MCXA 2IKDA 4YIRA 2QSHA 2K2XA 3IF4A 1H5OA 1WXNA 1BDSA 1ZUEA 2HJEA 3D4UB 2DLAA 3KEZA 1EL6A 3LMSB 3MYVA 1SHIA 2BDSA 3C38A 2QSGA 1WQKA 1ZUFA 1APFA 2B9KA 3C30A 1ZLHB 2IKEA 4GV5A 1ATXA 1B8WA 2XXLA 1Z99A 1ZHHB 2H9XA 1GL9B 2JR3A 2SH1A 2MN3A 2JTOA
chains in the Genus database with same CATH topology

2MUBA 1SH1A 1D6BA 2HJ9C 2RNGA 1AHLA 1ZLIB 3MCXA 2QSFA 2IKDA 4YIRA 2QSHA 2K2XA 1H5OA 1WXNA 1BDSA 1ZUEA 2HJEA 3D4UB 2DLAA 3KEZA 3MYVA 3LMSB 2QSGA 1SHIA 2BDSA 3C38A 1WQKA 1ZUFA 1APFA 2B9KA 3C30A 1ZLHB 2IKEA 4GV5A 1ATXA 1B8WA 2XXLA 1Z99A 1ZHHB 2H9XA 2JR3A 2SH1A 2MN3A 2JTOA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2MUB A;  1SH1 A;  1D6B A;  2RNG A;  1AHL A;  1ZLI B;  2K2X A;  1H5O A;  1WXN A;  1BDS A;  1ZUE A;  3D4U B;  3LMS B;  1SHI A;  2BDS A;  1WQK A;  1ZUF A;  1APF A;  1ZLH B;  4GV5 A;  1ATX A;  1B8W A;  1Z99 A;  2H9X A;  2SH1 A;  2MN3 A;  2JTO A; 
#chains in the Genus database with same CATH topology
 2MUB A;  1SH1 A;  1D6B A;  2HJ9 C;  2RNG A;  1AHL A;  1GKU B;  1ZLI B;  2QSF A;  3MCX A;  2IKD A;  4YIR A;  2QSH A;  2K2X A;  3IF4 A;  1H5O A;  1WXN A;  1BDS A;  1ZUE A;  2HJE A;  3D4U B;  2DLA A;  3KEZ A;  1EL6 A;  3LMS B;  3MYV A;  1SHI A;  2BDS A;  3C38 A;  2QSG A;  1WQK A;  1ZUF A;  1APF A;  2B9K A;  3C30 A;  1ZLH B;  2IKE A;  4GV5 A;  1ATX A;  1B8W A;  2XXL A;  1Z99 A;  1ZHH B;  2H9X A;  1GL9 B;  2JR3 A;  2SH1 A;  2MN3 A;  2JTO A; 
#chains in the Genus database with same CATH homology
 2MUB A;  1SH1 A;  1D6B A;  2HJ9 C;  2RNG A;  1AHL A;  1ZLI B;  3MCX A;  2QSF A;  2IKD A;  4YIR A;  2QSH A;  2K2X A;  1H5O A;  1WXN A;  1BDS A;  1ZUE A;  2HJE A;  3D4U B;  2DLA A;  3KEZ A;  3MYV A;  3LMS B;  2QSG A;  1SHI A;  2BDS A;  3C38 A;  1WQK A;  1ZUF A;  1APF A;  2B9K A;  3C30 A;  1ZLH B;  2IKE A;  4GV5 A;  1ATX A;  1B8W A;  2XXL A;  1Z99 A;  1ZHH B;  2H9X A;  2JR3 A;  2SH1 A;  2MN3 A;  2JTO A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2H9XA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations