4TWGA

The structure of the molybdopterin biosynthesis mog protein from mycobacterium ulcerans
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
152
structure length
152
Chain Sequence
ARSAQIIIASTRAASGVYTDECGPIIAEWLEQRGFSPLESKVVADGNPVGEALQDAVEAQVDLIITSGGTGISPTDSTPEQTVAVLDFVIPGLADAIRRAGLPKVPTSVLSRGVCGVAGQTLIVNLPGSPGGVRDGLDVLADVVHHALDQIA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The structure of the Molybdopterin biosynthesis Mog protein from Mycobacterium ulcerans
rcsb
molecule tags Biosynthetic protein
source organism Mycobacterium ulcerans
molecule keywords Molybdopterin biosynthesis Mog protein
total genus 51
structure length 152
sequence length 152
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2014-06-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 4twgA00
1T3EA 4TK4A 4XCWA 1UZ5A 5ERQA 3RFQA 1Y5EA 2NQKA 1O8OA 1UUXA 3KBQA 1O8NA 1G8LA 4CT9A 1DI6A 2G4RA 1IHCA 2NRPA 3PZYA 3TCRA 5ERRA 4U91A 2NQVA 2NQRA 4PD1A 1XI8A 4U90A 4TK1A 5ERTA 1UUYA 1WU2A 3MCHA 2IS8A 1O8QA 4TWGA 2F7YA 2QQ1A 5ERVA 2NROA 4CT8A 2NQNA 1FC5A 1MKZA 3IWTA 3MCIA 4CTAB 4UOCA 2NRSA 2PBQA 1DI7A 1G8RA 2NQSA 3MCJA 4UUWA 5G2RA 4PD0A 5G2SA 5ERUA 1R2KA 3K6AA 4UUXA 2FTSA 2G2CA 2NQUA 4NWOA 3OI9A 4TK3A 1JLJA 1EAVA 2FU3A 5ERSA 4CTAA 2F7WA 2NQQA 4LHBA 2NQMA
chains in the Genus database with same CATH superfamily
4TK4A 5ERRA 2NQVA 1UUYA 4TWGA 2NQNA 3IWTA 2NRSA 1G8RA 5G2RA 5ERUA 4NWOA 1EAVA 4CTAA 4LHBA 2NQMA 1YZYA 1UZ5A 5ERQA 2G4RA 3DQQA 4U91A 1XI8A 4TK1A 2F7YA 2QQ1A 1MKZA 5DMHA 2NQSA 4UUXA 2FTSA 2NQUA 3OI9A 1T3EA 2NQKA 3KBQA 4CT9A 1O8NA 1G8LA 1DI6A 1IHCA 5ERTA 1WU2A 3MCHA 1O8QA 5ERVA 2NROA 1FC5A 4CTAB 3MCIA 4UOCA 1DI7A 3MCJA 5G2SA 1R2KA 3K6AA 2G2CA 4TK3A 5ERSA 2F7WA 4XCWA 3RFQA 1Y5EA 1O8OA 1UUXA 2NRPA 3TCRA 3PZYA 2NQRA 4PD1A 4U90A 2IS8A 4CT8A 2PBQA 4UUWA 4PD0A 1JLJA 2FU3A 2NQQA
chains in the Genus database with same CATH topology
1T3EA 4TK4A 4XCWA 1UZ5A 5ERQA 3RFQA 1Y5EA 2NQKA 1O8OA 1UUXA 3KBQA 1O8NA 1G8LA 4CT9A 1DI6A 2G4RA 1IHCA 2NRPA 3PZYA 3TCRA 5ERRA 4U91A 2NQVA 2NQRA 4PD1A 1XI8A 4U90A 4TK1A 5ERTA 1UUYA 1WU2A 3MCHA 2IS8A 1O8QA 4TWGA 2F7YA 2QQ1A 5ERVA 2NROA 4CT8A 2NQNA 1FC5A 1MKZA 3IWTA 3MCIA 4CTAB 4UOCA 2NRSA 2PBQA 1DI7A 1G8RA 2NQSA 3MCJA 4UUWA 5G2RA 4PD0A 5G2SA 5ERUA 1R2KA 3K6AA 4UUXA 2FTSA 2G2CA 2NQUA 4NWOA 3OI9A 4TK3A 1JLJA 1EAVA 2FU3A 5ERSA 4CTAA 2F7WA 2NQQA 4LHBA 2NQMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T3E A;  4TK4 A;  4XCW A;  1UZ5 A;  5ERQ A;  3RFQ A;  1Y5E A;  2NQK A;  1O8O A;  1UUX A;  3KBQ A;  1O8N A;  1G8L A;  4CT9 A;  1DI6 A;  2G4R A;  1IHC A;  2NRP A;  3PZY A;  3TCR A;  5ERR A;  4U91 A;  2NQV A;  2NQR A;  4PD1 A;  1XI8 A;  4U90 A;  4TK1 A;  5ERT A;  1UUY A;  1WU2 A;  3MCH A;  2IS8 A;  1O8Q A;  4TWG A;  2F7Y A;  2QQ1 A;  5ERV A;  2NRO A;  4CT8 A;  2NQN A;  1FC5 A;  1MKZ A;  3IWT A;  3MCI A;  4CTA B;  4UOC A;  2NRS A;  2PBQ A;  1DI7 A;  1G8R A;  2NQS A;  3MCJ A;  4UUW A;  5G2R A;  4PD0 A;  5G2S A;  5ERU A;  1R2K A;  3K6A A;  4UUX A;  2FTS A;  2G2C A;  2NQU A;  4NWO A;  3OI9 A;  4TK3 A;  1JLJ A;  1EAV A;  2FU3 A;  5ERS A;  4CTA A;  2F7W A;  2NQQ A;  4LHB A;  2NQM A; 
#chains in the Genus database with same CATH topology
 4TK4 A;  5ERR A;  2NQV A;  1UUY A;  4TWG A;  2NQN A;  3IWT A;  2NRS A;  1G8R A;  5G2R A;  5ERU A;  4NWO A;  1EAV A;  4CTA A;  4LHB A;  2NQM A;  1YZY A;  1UZ5 A;  5ERQ A;  2G4R A;  3DQQ A;  4U91 A;  1XI8 A;  4TK1 A;  2F7Y A;  2QQ1 A;  1MKZ A;  5DMH A;  2NQS A;  4UUX A;  2FTS A;  2NQU A;  3OI9 A;  1T3E A;  2NQK A;  3KBQ A;  4CT9 A;  1O8N A;  1G8L A;  1DI6 A;  1IHC A;  5ERT A;  1WU2 A;  3MCH A;  1O8Q A;  5ERV A;  2NRO A;  1FC5 A;  4CTA B;  3MCI A;  4UOC A;  1DI7 A;  3MCJ A;  5G2S A;  1R2K A;  3K6A A;  2G2C A;  4TK3 A;  5ERS A;  2F7W A;  4XCW A;  3RFQ A;  1Y5E A;  1O8O A;  1UUX A;  2NRP A;  3TCR A;  3PZY A;  2NQR A;  4PD1 A;  4U90 A;  2IS8 A;  4CT8 A;  2PBQ A;  4UUW A;  4PD0 A;  1JLJ A;  2FU3 A;  2NQQ A; 
#chains in the Genus database with same CATH homology
 1T3E A;  4TK4 A;  4XCW A;  1UZ5 A;  5ERQ A;  3RFQ A;  1Y5E A;  2NQK A;  1O8O A;  1UUX A;  3KBQ A;  1O8N A;  1G8L A;  4CT9 A;  1DI6 A;  2G4R A;  1IHC A;  2NRP A;  3PZY A;  3TCR A;  5ERR A;  4U91 A;  2NQV A;  2NQR A;  4PD1 A;  1XI8 A;  4U90 A;  4TK1 A;  5ERT A;  1UUY A;  1WU2 A;  3MCH A;  2IS8 A;  1O8Q A;  4TWG A;  2F7Y A;  2QQ1 A;  5ERV A;  2NRO A;  4CT8 A;  2NQN A;  1FC5 A;  1MKZ A;  3IWT A;  3MCI A;  4CTA B;  4UOC A;  2NRS A;  2PBQ A;  1DI7 A;  1G8R A;  2NQS A;  3MCJ A;  4UUW A;  5G2R A;  4PD0 A;  5G2S A;  5ERU A;  1R2K A;  3K6A A;  4UUX A;  2FTS A;  2G2C A;  2NQU A;  4NWO A;  3OI9 A;  4TK3 A;  1JLJ A;  1EAV A;  2FU3 A;  5ERS A;  4CTA A;  2F7W A;  2NQQ A;  4LHB A;  2NQM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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