1WLGA

Crystal structure of flge31, a major fragment of the hook protein
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
293
structure length
293
Chain Sequence
GLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism.
pubmed doi rcsb
molecule tags Structural protein
source organism Salmonella typhimurium
molecule keywords Flagellar hook protein flgE
total genus 54
structure length 293
sequence length 293
chains with identical sequence B
ec nomenclature
pdb deposition date 2004-06-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07559 FlaE Flagellar basal body protein FlaE
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.98.20 Mainly Beta Sandwich Tick-borne Encephalitis virus Glycoprotein; domain 1 Flagellar hook protein FlgE 1wlgA02
1WLGA
chains in the Genus database with same CATH superfamily
5IREA 3J2PA 1SVBA 4UT6A 2HG0A 3N41F 1TG8A 3UAJA 1UZGA 3G7TA 4ADIA 2I69A 1RERA 4B3VA 5H37A 5JHLA 3U2GA 5GZNA 1WLGA 4UTBA 4OJDH 4OJEH 5LCVA 5JHMA 3UC0A 3C5XA 3N44F 2ALAA 1OKEA 3N43F 3I50E 4GSXA 4OJCA 4ADJA 4UTCA 5LBSA 1URZA 3J27A 3C6EA 4HJ1A 3P54A 4ADGA 4FG0A 1OK8A 3U2HA 5GZOA 3N40F 1OANA 3N42F 4UT9A 4UTAA 5LBVA 4GT0A 5IZ7A
chains in the Genus database with same CATH topology
1WLGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WLG A; 
#chains in the Genus database with same CATH topology
 5IRE A;  3J2P A;  1SVB A;  4UT6 A;  2HG0 A;  3N41 F;  1TG8 A;  3UAJ A;  1UZG A;  3G7T A;  4ADI A;  2I69 A;  1RER A;  4B3V A;  5H37 A;  5JHL A;  3U2G A;  5GZN A;  1WLG A;  4UTB A;  4OJD H;  4OJE H;  5LCV A;  5JHM A;  3UC0 A;  3C5X A;  3N44 F;  2ALA A;  1OKE A;  3N43 F;  3I50 E;  4GSX A;  4OJC A;  4ADJ A;  4UTC A;  5LBS A;  1URZ A;  3J27 A;  3C6E A;  4HJ1 A;  3P54 A;  4ADG A;  4FG0 A;  1OK8 A;  3U2H A;  5GZO A;  3N40 F;  1OAN A;  3N42 F;  4UT9 A;  4UTA A;  5LBV A;  4GT0 A;  5IZ7 A; 
#chains in the Genus database with same CATH homology
 1WLG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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