2NQRA

Moea d142n
Total Genus 108
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
108
sequence length
404
structure length
404
Chain Sequence
LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGENISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Mutational Analysis of Escherichia coli MoeA: Two Functional Activities Map to the Active Site Cleft.
pubmed doi rcsb
molecule keywords Molybdopterin biosynthesis protein moeA
molecule tags Biosynthetic protein
source organism Escherichia coli
total genus 108
structure length 404
sequence length 404
chains with identical sequence B
ec nomenclature ec 2.10.1.1: Molybdopterin molybdotransferase.
pdb deposition date 2006-10-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
A PF03453 MoeA_N MoeA N-terminal region (domain I and II)
A PF03454 MoeA_C MoeA C-terminal region (domain IV)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.340.10 Mainly Beta Beta Barrel Beta-clip MoeA, C-terminal, domain IV 2nqrA04
2.170.190.11 Mainly Beta Beta Complex Molybdopterin biosynthesis moeA protein; domain 3 Molybdopterin biosynthesis moea protein, domain 3. 2nqrA03
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 2nqrA01
3.90.105.10 Alpha Beta Alpha-Beta Complex Molybdopterin biosynthesis moea protein, domain 2 Molybdopterin biosynthesis moea protein, domain 2 2nqrA02
1G8LA 4CT8A 1WU2A 5ERUA 4PD1A 1UUYA 4UUXA 2NRSA 5ERTA 1IHCA 1T3EA 1UUXA 2NQQA 1O8QA 5ERRA 2NQRA 4UUWA 1XI8A 1DI6A 2NROA 2F7YA 4NWOA 3MCIA 2NQKA 4CTAA 4LHBA 2G2CA 2NQMA 5ERSA 1R2KA 2IS8A 2NRPA 3IWTA 3MCHA 5ERQA 2F7WA 4UOCA 3PZYA 4PD0A 3TCRA 4TK4A 4CT9A 3K6AA 2FTSA 2PBQA 1EAVA 4TK1A 2NQUA 1O8NA 4TK3A 1FC5A 2QQ1A 4U91A 4U90A 4XCWA 1DI7A 1MKZA 3KBQA 4TWGA 3MCJA 2NQVA 2X3LA 1G8RA 2NQSA 1Y5EA 1JLJA 1UZ5A 1O8OA 2G4RA 3OI9A 4CTAB 5G2SA 5ERVA 3RFQA 2FU3A 2NQNA 5G2RA
chains in the Genus database with same CATH superfamily
1G8LA 4CT8A 1WU2A 5ERUA 1YZYA 4PD1A 1UUYA 4UUXA 1I6VD 2NRSA 5ERTA 1IW7D 1IHCA 1T3EA 1HQMD 1UUXA 2NQQA 1O8QA 5ERRA 2NQRA 4UUWA 1XI8A 5DMHA 1DI6A 2NROA 2F7YA 4NWOA 3MCIA 2NQKA 4CTAA 4LHBA 2G2CA 2NQMA 5ERSA 1R2KA 2IS8A 2NRPA 3IWTA 3MCHA 5ERQA 5D6GA 2F7WA 4UOCA 3PZYA 4PD0A 3TCRA 4TK4A 4NWBA 4CT9A 3K6AA 2FTSA 2PBQA 1EAVA 4TK1A 2NQUA 1O8NA 4TK3A 1FC5A 2QQ1A 4U91A 4U90A 4XCWA 1DI7A 1MKZA 5D8HB 3KBQA 4TWGA 3MCJA 2NQVA 2X3LA 1G8RA 2NQSA 1Y5EA 1JLJA 1UZ5A 1O8OA 2G4RA 3OI9A 4CTAB 5G2SA 5ERVA 3JSYA 3DQQA 3RFQA 2FU3A 2NQNA 5G2RA
chains in the Genus database with same CATH topology
1G8LA 4CT8A 1WU2A 5ERUA 4PD1A 1UUYA 4UUXA 1I6VD 2NRSA 5ERTA 1IW7D 1IHCA 1T3EA 1HQMD 1UUXA 2NQQA 1O8QA 5ERRA 2NQRA 4UUWA 1XI8A 1DI6A 2NROA 2F7YA 4NWOA 3MCIA 2NQKA 4CTAA 4LHBA 2G2CA 2NQMA 5ERSA 1R2KA 2IS8A 2NRPA 3IWTA 3MCHA 5ERQA 5D6GA 2F7WA 4UOCA 3PZYA 4PD0A 3TCRA 4TK4A 4NWBA 4CT9A 3K6AA 2FTSA 2PBQA 1EAVA 4TK1A 2NQUA 1O8NA 4TK3A 1FC5A 2QQ1A 4U91A 4U90A 4XCWA 1DI7A 1MKZA 5D8HB 3KBQA 4TWGA 3MCJA 2NQVA 2X3LA 1G8RA 2NQSA 1Y5EA 1JLJA 1UZ5A 1O8OA 2G4RA 3OI9A 4CTAB 5G2SA 5ERVA 3JSYA 3RFQA 2FU3A 2NQNA 5G2RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G8L A;  4CT8 A;  1WU2 A;  5ERU A;  4PD1 A;  1UUY A;  4UUX A;  2NRS A;  5ERT A;  1IHC A;  1T3E A;  1UUX A;  2NQQ A;  1O8Q A;  5ERR A;  2NQR A;  4UUW A;  1XI8 A;  1DI6 A;  2NRO A;  2F7Y A;  4NWO A;  3MCI A;  2NQK A;  4CTA A;  4LHB A;  2G2C A;  2NQM A;  5ERS A;  1R2K A;  2IS8 A;  2NRP A;  3IWT A;  3MCH A;  5ERQ A;  2F7W A;  4UOC A;  3PZY A;  4PD0 A;  3TCR A;  4TK4 A;  4CT9 A;  3K6A A;  2FTS A;  2PBQ A;  1EAV A;  4TK1 A;  2NQU A;  1O8N A;  4TK3 A;  1FC5 A;  2QQ1 A;  4U91 A;  4U90 A;  4XCW A;  1DI7 A;  1MKZ A;  3KBQ A;  4TWG A;  3MCJ A;  2NQV A;  2X3L A;  1G8R A;  2NQS A;  1Y5E A;  1JLJ A;  1UZ5 A;  1O8O A;  2G4R A;  3OI9 A;  4CTA B;  5G2S A;  5ERV A;  3RFQ A;  2FU3 A;  2NQN A;  5G2R A; 
#chains in the Genus database with same CATH topology
 1G8L A;  4CT8 A;  1WU2 A;  5ERU A;  1YZY A;  4PD1 A;  1UUY A;  4UUX A;  1I6V D;  2NRS A;  5ERT A;  1IW7 D;  1IHC A;  1T3E A;  1HQM D;  1UUX A;  2NQQ A;  1O8Q A;  5ERR A;  2NQR A;  4UUW A;  1XI8 A;  5DMH A;  1DI6 A;  2NRO A;  2F7Y A;  4NWO A;  3MCI A;  2NQK A;  4CTA A;  4LHB A;  2G2C A;  2NQM A;  5ERS A;  1R2K A;  2IS8 A;  2NRP A;  3IWT A;  3MCH A;  5ERQ A;  5D6G A;  2F7W A;  4UOC A;  3PZY A;  4PD0 A;  3TCR A;  4TK4 A;  4NWB A;  4CT9 A;  3K6A A;  2FTS A;  2PBQ A;  1EAV A;  4TK1 A;  2NQU A;  1O8N A;  4TK3 A;  1FC5 A;  2QQ1 A;  4U91 A;  4U90 A;  4XCW A;  1DI7 A;  1MKZ A;  5D8H B;  3KBQ A;  4TWG A;  3MCJ A;  2NQV A;  2X3L A;  1G8R A;  2NQS A;  1Y5E A;  1JLJ A;  1UZ5 A;  1O8O A;  2G4R A;  3OI9 A;  4CTA B;  5G2S A;  5ERV A;  3JSY A;  3DQQ A;  3RFQ A;  2FU3 A;  2NQN A;  5G2R A; 
#chains in the Genus database with same CATH homology
 1G8L A;  4CT8 A;  1WU2 A;  5ERU A;  4PD1 A;  1UUY A;  4UUX A;  1I6V D;  2NRS A;  5ERT A;  1IW7 D;  1IHC A;  1T3E A;  1HQM D;  1UUX A;  2NQQ A;  1O8Q A;  5ERR A;  2NQR A;  4UUW A;  1XI8 A;  1DI6 A;  2NRO A;  2F7Y A;  4NWO A;  3MCI A;  2NQK A;  4CTA A;  4LHB A;  2G2C A;  2NQM A;  5ERS A;  1R2K A;  2IS8 A;  2NRP A;  3IWT A;  3MCH A;  5ERQ A;  5D6G A;  2F7W A;  4UOC A;  3PZY A;  4PD0 A;  3TCR A;  4TK4 A;  4NWB A;  4CT9 A;  3K6A A;  2FTS A;  2PBQ A;  1EAV A;  4TK1 A;  2NQU A;  1O8N A;  4TK3 A;  1FC5 A;  2QQ1 A;  4U91 A;  4U90 A;  4XCW A;  1DI7 A;  1MKZ A;  5D8H B;  3KBQ A;  4TWG A;  3MCJ A;  2NQV A;  2X3L A;  1G8R A;  2NQS A;  1Y5E A;  1JLJ A;  1UZ5 A;  1O8O A;  2G4R A;  3OI9 A;  4CTA B;  5G2S A;  5ERV A;  3JSY A;  3RFQ A;  2FU3 A;  2NQN A;  5G2R A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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