2O3BA

Crystal structure complex of nuclease a (nuca) with intra-cellular inhibitor nuia
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
241
structure length
241
Chain Sequence
GSISVHLLLGNPSGATPTKLTPDNYLMVKNQYALSYNNSKGTANWVAWQLNSSWLGNAERQDNFRPDKTLPAGWVRVTPSMYSGSGYARGHIAPSADRTKTTEDNAATFLMTNMMPQTPDNNRNTWGNLEDYCRELVSQGKELYIVAGPNGSLGKPLKGKVTVPKSTWKIVVVLDSPGSGLEGITANTRVIAVNIPNDPELNNDWRAYKVSVDELESLTGYDFLSNVSPNIQTSIESKVDN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
source organism Nostoc sp.
publication title The nuclease a-inhibitor complex is characterized by a novel metal ion bridge.
pubmed doi rcsb
molecule keywords Nuclease
total genus 73
structure length 241
sequence length 241
ec nomenclature ec 3.1.30.-:
pdb deposition date 2006-12-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01223 Endonuclease_NS DNA/RNA non-specific endonuclease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.570.10 Alpha Beta 3-Layer(aba) Sandwich Extracellular Endonuclease; Chain A Extracellular Endonuclease, subunit A 2o3bA00
5KXAA 1ZM8A 1SMNA 5L0EA 2XGRA 5GKPA 5IJSA 3NKQA 4ZG9A 2XRGA 4GTZA 5LIAA 3WAWA 5HRTA 4GTXA 3NKNA 4QH0A 4QN0A 5INHA 1QL0A 2XR9A 2XH3A 3NKMA 3WAXA 5L0KA 1QAEA 2O3BA 5LQQA 3S5BA 4GTWA 4ZGAA 4ZG6A 4QGOA 5DLVA 3WAYA 5DLWA 5IJQA 5L0BA 4GTYA 3WAVA 3ISMA 4ZG7A 4E3YA 4A1NA 1G8TA 5GKCA 5DLTA 3NKPA 3OWVA 4B56A 3NKOA 3NKRA
chains in the Genus database with same CATH superfamily
5KXAA 1ZM8A 1SMNA 5L0EA 2XGRA 5GKPA 5IJSA 3NKQA 4ZG9A 2XRGA 4GTZA 5LIAA 3WAWA 5HRTA 4GTXA 3NKNA 4QH0A 4QN0A 5INHA 1QL0A 2XR9A 2XH3A 3NKMA 3WAXA 5L0KA 1QAEA 2O3BA 5LQQA 3S5BA 4GTWA 4ZGAA 4ZG6A 4QGOA 5DLVA 3WAYA 5DLWA 5IJQA 5L0BA 4GTYA 3WAVA 3ISMA 4ZG7A 4E3YA 4A1NA 1G8TA 5GKCA 5DLTA 3NKPA 3OWVA 4B56A 3NKOA 3NKRA
chains in the Genus database with same CATH topology
5KXAA 1ZM8A 1SMNA 5L0EA 2XGRA 5GKPA 5IJSA 3NKQA 4ZG9A 2XRGA 4GTZA 5LIAA 3WAWA 5HRTA 4GTXA 3NKNA 4QH0A 4QN0A 5INHA 1QL0A 2XR9A 2XH3A 3NKMA 3WAXA 5L0KA 1QAEA 2O3BA 5LQQA 3S5BA 4GTWA 4ZGAA 4ZG6A 4QGOA 5DLVA 3WAYA 5DLWA 5IJQA 5L0BA 4GTYA 3WAVA 3ISMA 4ZG7A 4E3YA 4A1NA 1G8TA 5GKCA 5DLTA 3NKPA 3OWVA 4B56A 3NKOA 3NKRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KXA A;  1ZM8 A;  1SMN A;  5L0E A;  2XGR A;  5GKP A;  5IJS A;  3NKQ A;  4ZG9 A;  2XRG A;  4GTZ A;  5LIA A;  3WAW A;  5HRT A;  4GTX A;  3NKN A;  4QH0 A;  4QN0 A;  5INH A;  1QL0 A;  2XR9 A;  2XH3 A;  3NKM A;  3WAX A;  5L0K A;  1QAE A;  2O3B A;  5LQQ A;  3S5B A;  4GTW A;  4ZGA A;  4ZG6 A;  4QGO A;  5DLV A;  3WAY A;  5DLW A;  5IJQ A;  5L0B A;  4GTY A;  3WAV A;  3ISM A;  4ZG7 A;  4E3Y A;  4A1N A;  1G8T A;  5GKC A;  5DLT A;  3NKP A;  3OWV A;  4B56 A;  3NKO A;  3NKR A; 
#chains in the Genus database with same CATH topology
 5KXA A;  1ZM8 A;  1SMN A;  5L0E A;  2XGR A;  5GKP A;  5IJS A;  3NKQ A;  4ZG9 A;  2XRG A;  4GTZ A;  5LIA A;  3WAW A;  5HRT A;  4GTX A;  3NKN A;  4QH0 A;  4QN0 A;  5INH A;  1QL0 A;  2XR9 A;  2XH3 A;  3NKM A;  3WAX A;  5L0K A;  1QAE A;  2O3B A;  5LQQ A;  3S5B A;  4GTW A;  4ZGA A;  4ZG6 A;  4QGO A;  5DLV A;  3WAY A;  5DLW A;  5IJQ A;  5L0B A;  4GTY A;  3WAV A;  3ISM A;  4ZG7 A;  4E3Y A;  4A1N A;  1G8T A;  5GKC A;  5DLT A;  3NKP A;  3OWV A;  4B56 A;  3NKO A;  3NKR A; 
#chains in the Genus database with same CATH homology
 5KXA A;  1ZM8 A;  1SMN A;  5L0E A;  2XGR A;  5GKP A;  5IJS A;  3NKQ A;  4ZG9 A;  2XRG A;  4GTZ A;  5LIA A;  3WAW A;  5HRT A;  4GTX A;  3NKN A;  4QH0 A;  4QN0 A;  5INH A;  1QL0 A;  2XR9 A;  2XH3 A;  3NKM A;  3WAX A;  5L0K A;  1QAE A;  2O3B A;  5LQQ A;  3S5B A;  4GTW A;  4ZGA A;  4ZG6 A;  4QGO A;  5DLV A;  3WAY A;  5DLW A;  5IJQ A;  5L0B A;  4GTY A;  3WAV A;  3ISM A;  4ZG7 A;  4E3Y A;  4A1N A;  1G8T A;  5GKC A;  5DLT A;  3NKP A;  3OWV A;  4B56 A;  3NKO A;  3NKR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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