2O3BA

Crystal structure complex of nuclease a (nuca) with intra-cellular inhibitor nuia
Total Genus 73
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
241
structure length
241
Chain Sequence
GSISVHLLLGNPSGATPTKLTPDNYLMVKNQYALSYNNSKGTANWVAWQLNSSWLGNAERQDNFRPDKTLPAGWVRVTPSMYSGSGYARGHIAPSADRTKTTEDNAATFLMTNMMPQTPDNNRNTWGNLEDYCRELVSQGKELYIVAGPNGSLGKPLKGKVTVPKSTWKIVVVLDSPGSGLEGITANTRVIAVNIPNDPELNNDWRAYKVSVDELESLTGYDFLSNVSPNIQTSIESKVDN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The nuclease a-inhibitor complex is characterized by a novel metal ion bridge.
pubmed doi rcsb
source organism Nostoc sp.
molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Nuclease
total genus 73
structure length 241
sequence length 241
ec nomenclature ec 3.1.30.-:
pdb deposition date 2006-12-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01223 Endonuclease_NS DNA/RNA non-specific endonuclease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.570.10 Alpha Beta 3-Layer(aba) Sandwich Extracellular Endonuclease; Chain A Extracellular Endonuclease, subunit A 2o3bA00
4QN0A 1QL0A 4GTZA 5KXAA 5DLWA 5LIAA 3NKOA 4QH0A 3ISMA 3NKPA 5INHA 5DLVA 3OWVA 3NKRA 5L0EA 2O3BA 2XRGA 4GTYA 2XGRA 2XH3A 3NKNA 5L0BA 5IJSA 1QAEA 4QGOA 1ZM8A 2XR9A 3NKQA 4ZG6A 4ZG9A 4ZGAA 5LQQA 3NKMA 1G8TA 5GKPA 4GTXA 4B56A 5L0KA 3WAWA 4ZG7A 5GKCA 3S5BA 5HRTA 1SMNA 5DLTA 3WAVA 5IJQA 3WAXA 4A1NA 3WAYA 4GTWA 4E3YA
chains in the Genus database with same CATH superfamily
4QN0A 1QL0A 4GTZA 5KXAA 5DLWA 5LIAA 3NKOA 4QH0A 3ISMA 3NKPA 5INHA 5DLVA 3OWVA 3NKRA 5L0EA 2O3BA 2XRGA 4GTYA 2XGRA 2XH3A 3NKNA 5L0BA 5IJSA 1QAEA 4QGOA 1ZM8A 2XR9A 3NKQA 4ZG6A 4ZG9A 4ZGAA 5LQQA 3NKMA 1G8TA 5GKPA 4GTXA 4B56A 5L0KA 3WAWA 4ZG7A 5GKCA 3S5BA 5HRTA 1SMNA 5DLTA 3WAVA 5IJQA 3WAXA 4A1NA 3WAYA 4GTWA 4E3YA
chains in the Genus database with same CATH topology
4QN0A 1QL0A 4GTZA 5KXAA 5DLWA 5LIAA 3NKOA 4QH0A 3ISMA 3NKPA 5INHA 5DLVA 3OWVA 3NKRA 5L0EA 2O3BA 2XRGA 4GTYA 2XGRA 2XH3A 3NKNA 5L0BA 5IJSA 1QAEA 4QGOA 1ZM8A 2XR9A 3NKQA 4ZG6A 4ZG9A 4ZGAA 5LQQA 3NKMA 1G8TA 5GKPA 4GTXA 4B56A 5L0KA 3WAWA 4ZG7A 5GKCA 3S5BA 5HRTA 1SMNA 5DLTA 3WAVA 5IJQA 3WAXA 4A1NA 3WAYA 4GTWA 4E3YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QN0 A;  1QL0 A;  4GTZ A;  5KXA A;  5DLW A;  5LIA A;  3NKO A;  4QH0 A;  3ISM A;  3NKP A;  5INH A;  5DLV A;  3OWV A;  3NKR A;  5L0E A;  2O3B A;  2XRG A;  4GTY A;  2XGR A;  2XH3 A;  3NKN A;  5L0B A;  5IJS A;  1QAE A;  4QGO A;  1ZM8 A;  2XR9 A;  3NKQ A;  4ZG6 A;  4ZG9 A;  4ZGA A;  5LQQ A;  3NKM A;  1G8T A;  5GKP A;  4GTX A;  4B56 A;  5L0K A;  3WAW A;  4ZG7 A;  5GKC A;  3S5B A;  5HRT A;  1SMN A;  5DLT A;  3WAV A;  5IJQ A;  3WAX A;  4A1N A;  3WAY A;  4GTW A;  4E3Y A; 
#chains in the Genus database with same CATH topology
 4QN0 A;  1QL0 A;  4GTZ A;  5KXA A;  5DLW A;  5LIA A;  3NKO A;  4QH0 A;  3ISM A;  3NKP A;  5INH A;  5DLV A;  3OWV A;  3NKR A;  5L0E A;  2O3B A;  2XRG A;  4GTY A;  2XGR A;  2XH3 A;  3NKN A;  5L0B A;  5IJS A;  1QAE A;  4QGO A;  1ZM8 A;  2XR9 A;  3NKQ A;  4ZG6 A;  4ZG9 A;  4ZGA A;  5LQQ A;  3NKM A;  1G8T A;  5GKP A;  4GTX A;  4B56 A;  5L0K A;  3WAW A;  4ZG7 A;  5GKC A;  3S5B A;  5HRT A;  1SMN A;  5DLT A;  3WAV A;  5IJQ A;  3WAX A;  4A1N A;  3WAY A;  4GTW A;  4E3Y A; 
#chains in the Genus database with same CATH homology
 4QN0 A;  1QL0 A;  4GTZ A;  5KXA A;  5DLW A;  5LIA A;  3NKO A;  4QH0 A;  3ISM A;  3NKP A;  5INH A;  5DLV A;  3OWV A;  3NKR A;  5L0E A;  2O3B A;  2XRG A;  4GTY A;  2XGR A;  2XH3 A;  3NKN A;  5L0B A;  5IJS A;  1QAE A;  4QGO A;  1ZM8 A;  2XR9 A;  3NKQ A;  4ZG6 A;  4ZG9 A;  4ZGA A;  5LQQ A;  3NKM A;  1G8T A;  5GKP A;  4GTX A;  4B56 A;  5L0K A;  3WAW A;  4ZG7 A;  5GKC A;  3S5B A;  5HRT A;  1SMN A;  5DLT A;  3WAV A;  5IJQ A;  3WAX A;  4A1N A;  3WAY A;  4GTW A;  4E3Y A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...