1WX2B

Crystal structure of the oxy-form of the copper-bound streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
83
structure length
72
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
pubmed doi rcsb
molecule keywords tyrosinase
total genus 15
structure length 72
sequence length 83
ec nomenclature
pdb deposition date 2005-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 1wx2B01
2ZWEB 1WX4B 2ZWGB 1WX5B 3AWVB 3AWTB 2ZMYB 3AWZB 3AWXB 2ZMXB 1WX2B 1WXCB 3AWUB 2AHKB 2ZWDB 3AWWB 3AWSB 2JV8A 3AWYB 2ZMZB 2AHLB 3AX0B 2ZWFB
chains in the Genus database with same CATH superfamily
2ZWEB 1WX4B 2ZWGB 1WX5B 1Z03A 4NBEA 3AWVB 3AWTB 4NBFA 2ZMYB 3AWZB 3AWXB 3GCFA 2DE7A 3VMIA 2ZMXB 2DE5A 3GKQA 4NBBA 1WX2B 4NBDA 1Z02A 3VMGA 1WXCB 3AWUB 2DE6A 2AHKB 2ZWDB 1WW9A 3AWWB 3AWSB 2JV8A 1Z01A 3AWYB 4NBAA 2ZMZB 2AHLB 3AX0B 4NB9A 3VMHA 4NBCA 4NBGA 2ZWFB 4NB8A 4NBHA
chains in the Genus database with same CATH topology
2ZWEB 1WX4B 2ZWGB 1WX5B 3AWVB 3AWTB 2ZMYB 3AWZB 3AWXB 2ZMXB 1WX2B 1WXCB 3AWUB 2AHKB 2ZWDB 3AWWB 3AWSB 2JV8A 3AWYB 2ZMZB 2AHLB 3AX0B 2ZWFB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZWE B;  1WX4 B;  2ZWG B;  1WX5 B;  3AWV B;  3AWT B;  2ZMY B;  3AWZ B;  3AWX B;  2ZMX B;  1WX2 B;  1WXC B;  3AWU B;  2AHK B;  2ZWD B;  3AWW B;  3AWS B;  2JV8 A;  3AWY B;  2ZMZ B;  2AHL B;  3AX0 B;  2ZWF B; 
#chains in the Genus database with same CATH topology
 2ZWE B;  1WX4 B;  2ZWG B;  1WX5 B;  1Z03 A;  4NBE A;  3AWV B;  3AWT B;  4NBF A;  2ZMY B;  3AWZ B;  3AWX B;  3GCF A;  2DE7 A;  3VMI A;  2ZMX B;  2DE5 A;  3GKQ A;  4NBB A;  1WX2 B;  4NBD A;  1Z02 A;  3VMG A;  1WXC B;  3AWU B;  2DE6 A;  2AHK B;  2ZWD B;  1WW9 A;  3AWW B;  3AWS B;  2JV8 A;  1Z01 A;  3AWY B;  4NBA A;  2ZMZ B;  2AHL B;  3AX0 B;  4NB9 A;  3VMH A;  4NBC A;  4NBG A;  2ZWF B;  4NB8 A;  4NBH A; 
#chains in the Genus database with same CATH homology
 2ZWE B;  1WX4 B;  2ZWG B;  1WX5 B;  3AWV B;  3AWT B;  2ZMY B;  3AWZ B;  3AWX B;  2ZMX B;  1WX2 B;  1WXC B;  3AWU B;  2AHK B;  2ZWD B;  3AWW B;  3AWS B;  2JV8 A;  3AWY B;  2ZMZ B;  2AHL B;  3AX0 B;  2ZWF B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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