2ZMXB

Crystal structure of the met1-form of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 36 hours
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
83
structure length
77
Chain Sequence
AAPESFDEVYKGRRIQGRPAHEHGGGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
pubmed doi rcsb
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
molecule keywords Tyrosinase
total genus 17
structure length 77
sequence length 83
ec nomenclature
pdb deposition date 2008-04-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 2zmxB01
3AWUB 3AWXB 2ZWGB 1WX4B 2ZWEB 2AHLB 2ZWDB 2JV8A 3AWZB 1WX2B 3AWWB 3AWVB 2ZMZB 3AWTB 2ZMYB 3AWSB 3AWYB 2ZMXB 1WXCB 1WX5B 2ZWFB 2AHKB 3AX0B
chains in the Genus database with same CATH superfamily
3AWUB 3AWXB 4NB8A 4NBGA 3VMHA 2ZWGB 1WX4B 4NBEA 2ZWEB 4NBCA 3GKQA 1WW9A 2AHLB 3GCFA 2DE6A 2DE7A 4NBDA 2ZWDB 4NBAA 1Z03A 3VMIA 2JV8A 3AWZB 2DE5A 3VMGA 4NBBA 1WX2B 3AWWB 3AWVB 1Z02A 2ZMZB 3AWTB 4NB9A 2ZMYB 4NBHA 4NBFA 3AWSB 3AWYB 2ZMXB 1WXCB 1WX5B 2ZWFB 1Z01A 2AHKB 3AX0B
chains in the Genus database with same CATH topology
3AWUB 3AWXB 2ZWGB 1WX4B 2ZWEB 2AHLB 2ZWDB 2JV8A 3AWZB 1WX2B 3AWWB 3AWVB 2ZMZB 3AWTB 2ZMYB 3AWSB 3AWYB 2ZMXB 1WXCB 1WX5B 2ZWFB 2AHKB 3AX0B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AWU B;  3AWX B;  2ZWG B;  1WX4 B;  2ZWE B;  2AHL B;  2ZWD B;  2JV8 A;  3AWZ B;  1WX2 B;  3AWW B;  3AWV B;  2ZMZ B;  3AWT B;  2ZMY B;  3AWS B;  3AWY B;  2ZMX B;  1WXC B;  1WX5 B;  2ZWF B;  2AHK B;  3AX0 B; 
#chains in the Genus database with same CATH topology
 3AWU B;  3AWX B;  4NB8 A;  4NBG A;  3VMH A;  2ZWG B;  1WX4 B;  4NBE A;  2ZWE B;  4NBC A;  3GKQ A;  1WW9 A;  2AHL B;  3GCF A;  2DE6 A;  2DE7 A;  4NBD A;  2ZWD B;  4NBA A;  1Z03 A;  3VMI A;  2JV8 A;  3AWZ B;  2DE5 A;  3VMG A;  4NBB A;  1WX2 B;  3AWW B;  3AWV B;  1Z02 A;  2ZMZ B;  3AWT B;  4NB9 A;  2ZMY B;  4NBH A;  4NBF A;  3AWS B;  3AWY B;  2ZMX B;  1WXC B;  1WX5 B;  2ZWF B;  1Z01 A;  2AHK B;  3AX0 B; 
#chains in the Genus database with same CATH homology
 3AWU B;  3AWX B;  2ZWG B;  1WX4 B;  2ZWE B;  2AHL B;  2ZWD B;  2JV8 A;  3AWZ B;  1WX2 B;  3AWW B;  3AWV B;  2ZMZ B;  3AWT B;  2ZMY B;  3AWS B;  3AWY B;  2ZMX B;  1WXC B;  1WX5 B;  2ZWF B;  2AHK B;  3AX0 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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