2ZWGB

Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 12 hours
Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
83
structure length
71
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLHVMRNADGSWISVVSHDPVPTPRAAARAAVDELQGAPLLP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYTIV1 (48-51)S1 (45-49)S2 (52-57)TIV2 (58-72)Updating...
connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase
rcsb
molecule keywords Tyrosinase
total genus 16
structure length 71
sequence length 83
ec nomenclature
pdb deposition date 2008-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 2zwgB01
1WX2B 2JV8A 2AHKB 2ZWGB 3AWXB 3AWWB 3AWYB 3AWZB 2AHLB 1WX5B 3AWSB 2ZWDB 3AWVB 2ZWFB 2ZMXB 2ZMZB 3AWUB 3AX0B 1WX4B 1WXCB 3AWTB 2ZWEB 2ZMYB
chains in the Genus database with same CATH superfamily
1WX2B 2JV8A 2AHKB 4NB8A 2ZWGB 3AWXB 3AWWB 1Z01A 3AWYB 3AWZB 1WW9A 2AHLB 1WX5B 4NBCA 3AWSB 2ZWDB 4NBGA 4NBFA 4NB9A 3GKQA 2DE6A 3AWVB 2ZWFB 3VMIA 1Z03A 2DE5A 2ZMXB 3VMGA 2ZMZB 1Z02A 3VMHA 3AWUB 4NBAA 4NBHA 3GCFA 3AX0B 2DE7A 4NBBA 1WX4B 1WXCB 3AWTB 4NBDA 2ZWEB 4NBEA 2ZMYB
chains in the Genus database with same CATH topology
1WX2B 2JV8A 2AHKB 2ZWGB 3AWXB 3AWWB 3AWYB 3AWZB 2AHLB 1WX5B 3AWSB 2ZWDB 3AWVB 2ZWFB 2ZMXB 2ZMZB 3AWUB 3AX0B 1WX4B 1WXCB 3AWTB 2ZWEB 2ZMYB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1WX2 B;  2JV8 A;  2AHK B;  2ZWG B;  3AWX B;  3AWW B;  3AWY B;  3AWZ B;  2AHL B;  1WX5 B;  3AWS B;  2ZWD B;  3AWV B;  2ZWF B;  2ZMX B;  2ZMZ B;  3AWU B;  3AX0 B;  1WX4 B;  1WXC B;  3AWT B;  2ZWE B;  2ZMY B; 
#chains in the Genus database with same CATH topology
 1WX2 B;  2JV8 A;  2AHK B;  4NB8 A;  2ZWG B;  3AWX B;  3AWW B;  1Z01 A;  3AWY B;  3AWZ B;  1WW9 A;  2AHL B;  1WX5 B;  4NBC A;  3AWS B;  2ZWD B;  4NBG A;  4NBF A;  4NB9 A;  3GKQ A;  2DE6 A;  3AWV B;  2ZWF B;  3VMI A;  1Z03 A;  2DE5 A;  2ZMX B;  3VMG A;  2ZMZ B;  1Z02 A;  3VMH A;  3AWU B;  4NBA A;  4NBH A;  3GCF A;  3AX0 B;  2DE7 A;  4NBB A;  1WX4 B;  1WXC B;  3AWT B;  4NBD A;  2ZWE B;  4NBE A;  2ZMY B; 
#chains in the Genus database with same CATH homology
 1WX2 B;  2JV8 A;  2AHK B;  2ZWG B;  3AWX B;  3AWW B;  3AWY B;  3AWZ B;  2AHL B;  1WX5 B;  3AWS B;  2ZWD B;  3AWV B;  2ZWF B;  2ZMX B;  2ZMZ B;  3AWU B;  3AX0 B;  1WX4 B;  1WXC B;  3AWT B;  2ZWE B;  2ZMY B;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite
Application loaded.