3AWSB

Crystal structure of streptomyces tyrosinase in a complex with caddie soaked in a cu(ii)-containing solution for 20 hr: occupancy of cu(ii) is low
Total Genus 17

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
84
structure length
78
Chain Sequence
AAPESFDEVYKGRRIQGRPAHEHGGGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLPF

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYS3 (72-76)S1 (45-49)S2 (52-58)TVIII1 (70-73)TIV1 (48-51)Updating...
connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
molecule keywords Tyrosinase
total genus 17
structure length 78
sequence length 84
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awsB01
2AHLB 2ZWEB 2ZMYB 1WX2B 2ZWGB 3AWVB 3AWYB 3AWUB 2ZWFB 2ZMXB 2ZMZB 3AX0B 2JV8A 1WXCB 2AHKB 1WX4B 3AWZB 3AWWB 3AWTB 2ZWDB 3AWSB 1WX5B 3AWXB
chains in the Genus database with same CATH superfamily
1Z01A 4NBHA 2AHLB 2ZWEB 2ZMYB 3VMGA 1WX2B 2ZWGB 3AWVB 3AWYB 4NB9A 4NBCA 3AWUB 4NBEA 1Z03A 2DE7A 3GCFA 4NBDA 2ZWFB 2ZMXB 2ZMZB 3AX0B 3VMHA 1WW9A 2JV8A 3GKQA 4NB8A 1WXCB 2AHKB 1WX4B 3AWZB 3VMIA 4NBFA 3AWWB 4NBBA 1Z02A 3AWTB 2DE6A 2ZWDB 3AWSB 2DE5A 1WX5B 4NBGA 4NBAA 3AWXB
chains in the Genus database with same CATH topology
2AHLB 2ZWEB 2ZMYB 1WX2B 2ZWGB 3AWVB 3AWYB 3AWUB 2ZWFB 2ZMXB 2ZMZB 3AX0B 2JV8A 1WXCB 2AHKB 1WX4B 3AWZB 3AWWB 3AWTB 2ZWDB 3AWSB 1WX5B 3AWXB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2AHL B;  2ZWE B;  2ZMY B;  1WX2 B;  2ZWG B;  3AWV B;  3AWY B;  3AWU B;  2ZWF B;  2ZMX B;  2ZMZ B;  3AX0 B;  2JV8 A;  1WXC B;  2AHK B;  1WX4 B;  3AWZ B;  3AWW B;  3AWT B;  2ZWD B;  3AWS B;  1WX5 B;  3AWX B; 
#chains in the Genus database with same CATH topology
 1Z01 A;  4NBH A;  2AHL B;  2ZWE B;  2ZMY B;  3VMG A;  1WX2 B;  2ZWG B;  3AWV B;  3AWY B;  4NB9 A;  4NBC A;  3AWU B;  4NBE A;  1Z03 A;  2DE7 A;  3GCF A;  4NBD A;  2ZWF B;  2ZMX B;  2ZMZ B;  3AX0 B;  3VMH A;  1WW9 A;  2JV8 A;  3GKQ A;  4NB8 A;  1WXC B;  2AHK B;  1WX4 B;  3AWZ B;  3VMI A;  4NBF A;  3AWW B;  4NBB A;  1Z02 A;  3AWT B;  2DE6 A;  2ZWD B;  3AWS B;  2DE5 A;  1WX5 B;  4NBG A;  4NBA A;  3AWX B; 
#chains in the Genus database with same CATH homology
 2AHL B;  2ZWE B;  2ZMY B;  1WX2 B;  2ZWG B;  3AWV B;  3AWY B;  3AWU B;  2ZWF B;  2ZMX B;  2ZMZ B;  3AX0 B;  2JV8 A;  1WXC B;  2AHK B;  1WX4 B;  3AWZ B;  3AWW B;  3AWT B;  2ZWD B;  3AWS B;  1WX5 B;  3AWX B;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite
Application loaded.