3AWWB

Crystal structure of streptomyces tyrosinase in a complex with caddie soaked in a cu(ii)-containing solution for 80 hr: occupancy of cua is high
Total Genus 17

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
83
structure length
77
Chain Sequence
AAPESFDEVYKGRRIQGRPAHEHGGGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
S1 (45-49)S2 (52-58)EMPTYS3 (72-76)TIV1 (48-51)Updating...
connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
molecule keywords Tyrosinase
total genus 17
structure length 77
sequence length 83
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awwB01
1WX4B 1WXCB 3AWVB 3AWUB 3AWYB 3AX0B 2ZWEB 2ZMYB 3AWSB 2AHLB 3AWTB 2ZMXB 2ZWGB 3AWWB 1WX5B 3AWXB 2ZMZB 1WX2B 2ZWFB 2ZWDB 2AHKB 2JV8A 3AWZB
chains in the Genus database with same CATH superfamily
2DE7A 4NBBA 1WX4B 4NB8A 1WXCB 1Z02A 1WW9A 3AWVB 3AWUB 4NBGA 3AWYB 3AX0B 1Z01A 4NB9A 3GKQA 2ZWEB 3VMHA 2ZMYB 3AWSB 3GCFA 4NBHA 2AHLB 4NBCA 3AWTB 2ZMXB 2ZWGB 4NBFA 3AWWB 1WX5B 2DE6A 3AWXB 2ZMZB 1Z03A 4NBEA 2DE5A 4NBDA 1WX2B 2ZWFB 2ZWDB 2AHKB 2JV8A 3AWZB 3VMGA 3VMIA 4NBAA
chains in the Genus database with same CATH topology
1WX4B 1WXCB 3AWVB 3AWUB 3AWYB 3AX0B 2ZWEB 2ZMYB 3AWSB 2AHLB 3AWTB 2ZMXB 2ZWGB 3AWWB 1WX5B 3AWXB 2ZMZB 1WX2B 2ZWFB 2ZWDB 2AHKB 2JV8A 3AWZB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1WX4 B;  1WXC B;  3AWV B;  3AWU B;  3AWY B;  3AX0 B;  2ZWE B;  2ZMY B;  3AWS B;  2AHL B;  3AWT B;  2ZMX B;  2ZWG B;  3AWW B;  1WX5 B;  3AWX B;  2ZMZ B;  1WX2 B;  2ZWF B;  2ZWD B;  2AHK B;  2JV8 A;  3AWZ B; 
#chains in the Genus database with same CATH topology
 2DE7 A;  4NBB A;  1WX4 B;  4NB8 A;  1WXC B;  1Z02 A;  1WW9 A;  3AWV B;  3AWU B;  4NBG A;  3AWY B;  3AX0 B;  1Z01 A;  4NB9 A;  3GKQ A;  2ZWE B;  3VMH A;  2ZMY B;  3AWS B;  3GCF A;  4NBH A;  2AHL B;  4NBC A;  3AWT B;  2ZMX B;  2ZWG B;  4NBF A;  3AWW B;  1WX5 B;  2DE6 A;  3AWX B;  2ZMZ B;  1Z03 A;  4NBE A;  2DE5 A;  4NBD A;  1WX2 B;  2ZWF B;  2ZWD B;  2AHK B;  2JV8 A;  3AWZ B;  3VMG A;  3VMI A;  4NBA A; 
#chains in the Genus database with same CATH homology
 1WX4 B;  1WXC B;  3AWV B;  3AWU B;  3AWY B;  3AX0 B;  2ZWE B;  2ZMY B;  3AWS B;  2AHL B;  3AWT B;  2ZMX B;  2ZWG B;  3AWW B;  1WX5 B;  3AWX B;  2ZMZ B;  1WX2 B;  2ZWF B;  2ZWD B;  2AHK B;  2JV8 A;  3AWZ B;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite
Application loaded.