3AWXB

Crystal structure of streptomyces tyrosinase in a complex with caddie h82q mutant soaked in a cu(ii)-containing solution for 80 hr
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
83
structure length
72
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLQVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
molecule keywords Tyrosinase
total genus 16
structure length 72
sequence length 83
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awxB01
2AHKB 2ZWDB 2ZMZB 3AWSB 1WX5B 3AWZB 1WX2B 2ZWFB 2ZMXB 3AWXB 1WXCB 3AX0B 2JV8A 3AWYB 3AWTB 3AWUB 2ZWGB 2ZWEB 2AHLB 1WX4B 2ZMYB 3AWVB 3AWWB
chains in the Genus database with same CATH superfamily
1Z03A 3VMHA 4NBEA 2AHKB 2DE6A 3GCFA 1Z02A 4NB8A 4NBGA 2ZWDB 2ZMZB 3AWSB 4NBHA 1WX5B 2DE5A 3AWZB 4NBCA 2DE7A 3VMIA 3GKQA 1WX2B 2ZWFB 4NB9A 4NBBA 4NBFA 2ZMXB 3VMGA 4NBAA 3AWXB 1WXCB 3AX0B 2JV8A 3AWYB 3AWTB 3AWUB 2ZWGB 2ZWEB 2AHLB 1WX4B 1Z01A 2ZMYB 3AWVB 4NBDA 1WW9A 3AWWB
chains in the Genus database with same CATH topology
2AHKB 2ZWDB 2ZMZB 3AWSB 1WX5B 3AWZB 1WX2B 2ZWFB 2ZMXB 3AWXB 1WXCB 3AX0B 2JV8A 3AWYB 3AWTB 3AWUB 2ZWGB 2ZWEB 2AHLB 1WX4B 2ZMYB 3AWVB 3AWWB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2AHK B;  2ZWD B;  2ZMZ B;  3AWS B;  1WX5 B;  3AWZ B;  1WX2 B;  2ZWF B;  2ZMX B;  3AWX B;  1WXC B;  3AX0 B;  2JV8 A;  3AWY B;  3AWT B;  3AWU B;  2ZWG B;  2ZWE B;  2AHL B;  1WX4 B;  2ZMY B;  3AWV B;  3AWW B; 
#chains in the Genus database with same CATH topology
 1Z03 A;  3VMH A;  4NBE A;  2AHK B;  2DE6 A;  3GCF A;  1Z02 A;  4NB8 A;  4NBG A;  2ZWD B;  2ZMZ B;  3AWS B;  4NBH A;  1WX5 B;  2DE5 A;  3AWZ B;  4NBC A;  2DE7 A;  3VMI A;  3GKQ A;  1WX2 B;  2ZWF B;  4NB9 A;  4NBB A;  4NBF A;  2ZMX B;  3VMG A;  4NBA A;  3AWX B;  1WXC B;  3AX0 B;  2JV8 A;  3AWY B;  3AWT B;  3AWU B;  2ZWG B;  2ZWE B;  2AHL B;  1WX4 B;  1Z01 A;  2ZMY B;  3AWV B;  4NBD A;  1WW9 A;  3AWW B; 
#chains in the Genus database with same CATH homology
 2AHK B;  2ZWD B;  2ZMZ B;  3AWS B;  1WX5 B;  3AWZ B;  1WX2 B;  2ZWF B;  2ZMX B;  3AWX B;  1WXC B;  3AX0 B;  2JV8 A;  3AWY B;  3AWT B;  3AWU B;  2ZWG B;  2ZWE B;  2AHL B;  1WX4 B;  2ZMY B;  3AWV B;  3AWW B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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