3AWYB

Crystal structure of streptomyces tyrosinase in a complex with caddie m84l mutant soaked in a cu(ii)-containing solution for 80 hr
Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
84
structure length
73
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLHVLRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLPF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYTIV1 (48-51)S1 (45-49)S2 (52-57)TIV2 (58-72)Updating...
connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
molecule keywords Tyrosinase
total genus 16
structure length 73
sequence length 84
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awyB01
1WX4B 2ZMZB 3AWTB 3AWSB 3AWXB 3AX0B 3AWYB 3AWWB 3AWUB 2AHKB 1WX5B 3AWZB 2AHLB 2ZWDB 2ZWEB 1WX2B 1WXCB 2ZMXB 2ZMYB 2ZWFB 2JV8A 2ZWGB 3AWVB
chains in the Genus database with same CATH superfamily
1WW9A 4NBFA 3VMHA 4NBCA 1WX4B 2DE6A 4NB8A 2ZMZB 3AWTB 3AWSB 4NBAA 4NBBA 3AWXB 2DE7A 1Z02A 3AX0B 3AWYB 3VMIA 2DE5A 3AWWB 3AWUB 2AHKB 1WX5B 1Z03A 3AWZB 4NBGA 4NBDA 2AHLB 4NB9A 2ZWDB 3GKQA 2ZWEB 1WX2B 1WXCB 1Z01A 2ZMXB 4NBHA 3VMGA 3GCFA 2ZMYB 2ZWFB 4NBEA 2JV8A 2ZWGB 3AWVB
chains in the Genus database with same CATH topology
1WX4B 2ZMZB 3AWTB 3AWSB 3AWXB 3AX0B 3AWYB 3AWWB 3AWUB 2AHKB 1WX5B 3AWZB 2AHLB 2ZWDB 2ZWEB 1WX2B 1WXCB 2ZMXB 2ZMYB 2ZWFB 2JV8A 2ZWGB 3AWVB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1WX4 B;  2ZMZ B;  3AWT B;  3AWS B;  3AWX B;  3AX0 B;  3AWY B;  3AWW B;  3AWU B;  2AHK B;  1WX5 B;  3AWZ B;  2AHL B;  2ZWD B;  2ZWE B;  1WX2 B;  1WXC B;  2ZMX B;  2ZMY B;  2ZWF B;  2JV8 A;  2ZWG B;  3AWV B; 
#chains in the Genus database with same CATH topology
 1WW9 A;  4NBF A;  3VMH A;  4NBC A;  1WX4 B;  2DE6 A;  4NB8 A;  2ZMZ B;  3AWT B;  3AWS B;  4NBA A;  4NBB A;  3AWX B;  2DE7 A;  1Z02 A;  3AX0 B;  3AWY B;  3VMI A;  2DE5 A;  3AWW B;  3AWU B;  2AHK B;  1WX5 B;  1Z03 A;  3AWZ B;  4NBG A;  4NBD A;  2AHL B;  4NB9 A;  2ZWD B;  3GKQ A;  2ZWE B;  1WX2 B;  1WXC B;  1Z01 A;  2ZMX B;  4NBH A;  3VMG A;  3GCF A;  2ZMY B;  2ZWF B;  4NBE A;  2JV8 A;  2ZWG B;  3AWV B; 
#chains in the Genus database with same CATH homology
 1WX4 B;  2ZMZ B;  3AWT B;  3AWS B;  3AWX B;  3AX0 B;  3AWY B;  3AWW B;  3AWU B;  2AHK B;  1WX5 B;  3AWZ B;  2AHL B;  2ZWD B;  2ZWE B;  1WX2 B;  1WXC B;  2ZMX B;  2ZMY B;  2ZWF B;  2JV8 A;  2ZWG B;  3AWV B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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