3AWZB

Crystal structure of streptomyces tyrosinase in a complex with caddie h97q mutant soaked in a cu(ii)-containing solution for 80 hr
Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
84
structure length
78
Chain Sequence
PAAPESFDEVYKGRRIQGRPAHEHGGGYEVFVDGVQLHVMRNADGSWISVVSQYDPVPTPRAAARAAVDELQGAPLLP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYS3 (72-76)TIV1 (48-51)S1 (45-49)TVIII1 (70-73)S2 (52-58)Updating...
connected with : NaN
molecule tags Oxidoreductase/metal transport
source organism Streptomyces castaneoglobisporus
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
molecule keywords Tyrosinase
total genus 16
structure length 78
sequence length 84
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awzB01
2AHLB 3AWUB 3AWSB 2ZWEB 3AWTB 3AX0B 1WX4B 3AWZB 3AWWB 2ZMYB 2ZMXB 3AWXB 2ZWGB 1WX2B 3AWYB 1WXCB 2JV8A 1WX5B 3AWVB 2ZMZB 2ZWDB 2ZWFB 2AHKB
chains in the Genus database with same CATH superfamily
3GCFA 2AHLB 3AWUB 3AWSB 2DE6A 2ZWEB 2DE5A 3AX0B 1WX4B 3AWTB 1WW9A 3AWZB 3VMGA 3AWWB 2ZMYB 2ZMXB 3GKQA 3VMIA 1Z02A 3VMHA 4NB8A 3AWXB 2ZWGB 1WX2B 3AWYB 1WXCB 2JV8A 4NBBA 4NBDA 1WX5B 1Z03A 4NBAA 4NBEA 3AWVB 4NBFA 2ZMZB 2DE7A 2ZWDB 4NBGA 2ZWFB 4NB9A 2AHKB 4NBHA 4NBCA 1Z01A
chains in the Genus database with same CATH topology
2AHLB 3AWUB 3AWSB 2ZWEB 3AWTB 3AX0B 1WX4B 3AWZB 3AWWB 2ZMYB 2ZMXB 3AWXB 2ZWGB 1WX2B 3AWYB 1WXCB 2JV8A 1WX5B 3AWVB 2ZMZB 2ZWDB 2ZWFB 2AHKB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2AHL B;  3AWU B;  3AWS B;  2ZWE B;  3AWT B;  3AX0 B;  1WX4 B;  3AWZ B;  3AWW B;  2ZMY B;  2ZMX B;  3AWX B;  2ZWG B;  1WX2 B;  3AWY B;  1WXC B;  2JV8 A;  1WX5 B;  3AWV B;  2ZMZ B;  2ZWD B;  2ZWF B;  2AHK B; 
#chains in the Genus database with same CATH topology
 3GCF A;  2AHL B;  3AWU B;  3AWS B;  2DE6 A;  2ZWE B;  2DE5 A;  3AX0 B;  1WX4 B;  3AWT B;  1WW9 A;  3AWZ B;  3VMG A;  3AWW B;  2ZMY B;  2ZMX B;  3GKQ A;  3VMI A;  1Z02 A;  3VMH A;  4NB8 A;  3AWX B;  2ZWG B;  1WX2 B;  3AWY B;  1WXC B;  2JV8 A;  4NBB A;  4NBD A;  1WX5 B;  1Z03 A;  4NBA A;  4NBE A;  3AWV B;  4NBF A;  2ZMZ B;  2DE7 A;  2ZWD B;  4NBG A;  2ZWF B;  4NB9 A;  2AHK B;  4NBH A;  4NBC A;  1Z01 A; 
#chains in the Genus database with same CATH homology
 2AHL B;  3AWU B;  3AWS B;  2ZWE B;  3AWT B;  3AX0 B;  1WX4 B;  3AWZ B;  3AWW B;  2ZMY B;  2ZMX B;  3AWX B;  2ZWG B;  1WX2 B;  3AWY B;  1WXC B;  2JV8 A;  1WX5 B;  3AWV B;  2ZMZ B;  2ZWD B;  2ZWF B;  2AHK B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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