3KSVA

Hypothetical protein from leishmania major
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
141
structure length
141
Chain Sequence
MAANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTDEKTGLKIGWDTVKVASDELAEDAKRYSEAIAKI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Hypothetical protein (HIT family) from Leishmania major
rcsb
molecule tags Unknown function
source organism Leishmania major
molecule keywords Uncharacterized protein
total genus 38
structure length 141
sequence length 141
ec nomenclature
pdb deposition date 2009-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01230 HIT HIT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-like 3ksvA01
3O1CA 3I4SA 3L7XA 4INIA 2H39A 3I24A 3OHEA 1VLRA 2Q4LA 4ZKLA 4QDVA 3IMIA 4EQGA 3SPLA 2Q4HA 4YKLB 4NDHA 3FITA 1KPFA 4QDEA 1ST4A 3O1XA 4QEBA 1RZYA 3O0MA 3O1ZA 1KPAA 5IPCA 1KPEA 2EO4A 3KSVA 1FHIA 1XMMA 5I2FA 1KPBA 5FITA 3BL7A 5ED6A 1HXPA 5CS2A 4EGUA 1XMLA 3R6FA 4NDIA 3LB5A 4NDGA 3WO5A 1ZWJA 5IN3A 4XBAA 3BLAA 5RHNA 1AV5A 3N1TA 2FITA 3N1SA 1ST0A 4EQHA 1EMSA 3SZQA 4EQEA 4NK0A 3TW2A 1Z84A 3BL9A 1KPCA 1HXQA 3P0TA 5IPBA 5BV3A 3RHNA 2FHIA 4NJXA 1Y23A 3NRDA 3OMFA 3ANOA 2OIKA 4NDFA 4INCA 5ED3A 4ZGLA 5EMTA 4NJYA 3OXKA 3QGZA 4ZKVA 3OJ7A 5I2EA 1GUQA 3SPDA 5IPDA 1FITA 1GUPA 6FITA 3SP4A 4FITA 4NJZA 4RHNA 5IPEA 6RHNA
chains in the Genus database with same CATH superfamily
3O1CA 3I4SA 3L7XA 4INIA 2H39A 3I24A 3OHEA 1VLRA 2Q4LA 4ZKLA 4QDVA 3IMIA 2LJWA 4EQGA 2POFA 1L9VA 3SPLA 2Q4HA 4YKLB 2R7PA 4NDHA 2R7CA 4G0JA 3FITA 1KPFA 4QDEA 1ST4A 3O1XA 2GU0A 4QEBA 1RZYA 3O0MA 3O1ZA 1KPAA 4G0AA 5IPCA 1KPEA 2EO4A 3KSVA 1FHIA 1XMMA 2R8FA 5I2FA 1KPBA 5FITA 3BL7A 5ED6A 1HXPA 5CS2A 4EGUA 1XMLA 3R6FA 4NDIA 3LB5A 4NDGA 3WO5A 1ZWJA 4I5WA 5IN3A 4XBAA 3BLAA 5RHNA 1AV5A 3N1TA 2FITA 3N1SA 2R7JA 1ST0A 4EQHA 1EMSA 3SZQA 4EQEA 4NK0A 3TW2A 1Z84A 3BL9A 1KPCA 1HXQA 3P0TA 4I5TA 5BV3A 3RHNA 5IPBA 2FHIA 4NJXA 1Y23A 3NRDA 3OMFA 3ANOA 2OIKA 4NDFA 4INCA 5ED3A 4ZGLA 5EMTA 4NJYA 3OXKA 4I5VA 3QGZA 4ZKVA 3OJ7A 5I2EA 1GUQA 3SPDA 5IPDA 1FITA 1GUPA 6FITA 3SP4A 4FITA 4NJZA 4RHNA 5IPEA 6RHNA
chains in the Genus database with same CATH topology
3O1CA 3I4SA 3L7XA 4INIA 2H39A 3I24A 3OHEA 1VLRA 2Q4LA 4ZKLA 4QDVA 3IMIA 4EQGA 3SPLA 2Q4HA 4YKLB 4NDHA 3FITA 1KPFA 4QDEA 1ST4A 3O1XA 4QEBA 1RZYA 3O0MA 3O1ZA 1KPAA 5IPCA 1KPEA 2EO4A 3KSVA 1FHIA 1XMMA 5I2FA 1KPBA 5FITA 3BL7A 5ED6A 1HXPA 5CS2A 4EGUA 1XMLA 3R6FA 4NDIA 3LB5A 4NDGA 3WO5A 1ZWJA 5IN3A 4XBAA 3BLAA 5RHNA 1AV5A 3N1TA 2FITA 3N1SA 1ST0A 4EQHA 1EMSA 3SZQA 4EQEA 4NK0A 3TW2A 1Z84A 3BL9A 1KPCA 1HXQA 3P0TA 5IPBA 5BV3A 3RHNA 2FHIA 4NJXA 1Y23A 3NRDA 3OMFA 3ANOA 2OIKA 4NDFA 4INCA 5ED3A 4ZGLA 5EMTA 4NJYA 3OXKA 3QGZA 4ZKVA 3OJ7A 5I2EA 1GUQA 3SPDA 5IPDA 1FITA 1GUPA 6FITA 3SP4A 4FITA 4NJZA 4RHNA 5IPEA 6RHNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3O1C A;  3I4S A;  3L7X A;  4INI A;  2H39 A;  3I24 A;  3OHE A;  1VLR A;  2Q4L A;  4ZKL A;  4QDV A;  3IMI A;  4EQG A;  3SPL A;  2Q4H A;  4YKL B;  4NDH A;  3FIT A;  1KPF A;  4QDE A;  1ST4 A;  3O1X A;  4QEB A;  1RZY A;  3O0M A;  3O1Z A;  1KPA A;  5IPC A;  1KPE A;  2EO4 A;  3KSV A;  1FHI A;  1XMM A;  5I2F A;  1KPB A;  5FIT A;  3BL7 A;  5ED6 A;  1HXP A;  5CS2 A;  4EGU A;  1XML A;  3R6F A;  4NDI A;  3LB5 A;  4NDG A;  3WO5 A;  1ZWJ A;  5IN3 A;  4XBA A;  3BLA A;  5RHN A;  1AV5 A;  3N1T A;  2FIT A;  3N1S A;  1ST0 A;  4EQH A;  1EMS A;  3SZQ A;  4EQE A;  4NK0 A;  3TW2 A;  1Z84 A;  3BL9 A;  1KPC A;  1HXQ A;  3P0T A;  5IPB A;  5BV3 A;  3RHN A;  2FHI A;  4NJX A;  1Y23 A;  3NRD A;  3OMF A;  3ANO A;  2OIK A;  4NDF A;  4INC A;  5ED3 A;  4ZGL A;  5EMT A;  4NJY A;  3OXK A;  3QGZ A;  4ZKV A;  3OJ7 A;  5I2E A;  1GUQ A;  3SPD A;  5IPD A;  1FIT A;  1GUP A;  6FIT A;  3SP4 A;  4FIT A;  4NJZ A;  4RHN A;  5IPE A;  6RHN A; 
#chains in the Genus database with same CATH topology
 3O1C A;  3I4S A;  3L7X A;  4INI A;  2H39 A;  3I24 A;  3OHE A;  1VLR A;  2Q4L A;  4ZKL A;  4QDV A;  3IMI A;  2LJW A;  4EQG A;  2POF A;  1L9V A;  3SPL A;  2Q4H A;  4YKL B;  2R7P A;  4NDH A;  2R7C A;  4G0J A;  3FIT A;  1KPF A;  4QDE A;  1ST4 A;  3O1X A;  2GU0 A;  4QEB A;  1RZY A;  3O0M A;  3O1Z A;  1KPA A;  4G0A A;  5IPC A;  1KPE A;  2EO4 A;  3KSV A;  1FHI A;  1XMM A;  2R8F A;  5I2F A;  1KPB A;  5FIT A;  3BL7 A;  5ED6 A;  1HXP A;  5CS2 A;  4EGU A;  1XML A;  3R6F A;  4NDI A;  3LB5 A;  4NDG A;  3WO5 A;  1ZWJ A;  4I5W A;  5IN3 A;  4XBA A;  3BLA A;  5RHN A;  1AV5 A;  3N1T A;  2FIT A;  3N1S A;  2R7J A;  1ST0 A;  4EQH A;  1EMS A;  3SZQ A;  4EQE A;  4NK0 A;  3TW2 A;  1Z84 A;  3BL9 A;  1KPC A;  1HXQ A;  3P0T A;  4I5T A;  5BV3 A;  3RHN A;  5IPB A;  2FHI A;  4NJX A;  1Y23 A;  3NRD A;  3OMF A;  3ANO A;  2OIK A;  4NDF A;  4INC A;  5ED3 A;  4ZGL A;  5EMT A;  4NJY A;  3OXK A;  4I5V A;  3QGZ A;  4ZKV A;  3OJ7 A;  5I2E A;  1GUQ A;  3SPD A;  5IPD A;  1FIT A;  1GUP A;  6FIT A;  3SP4 A;  4FIT A;  4NJZ A;  4RHN A;  5IPE A;  6RHN A; 
#chains in the Genus database with same CATH homology
 3O1C A;  3I4S A;  3L7X A;  4INI A;  2H39 A;  3I24 A;  3OHE A;  1VLR A;  2Q4L A;  4ZKL A;  4QDV A;  3IMI A;  4EQG A;  3SPL A;  2Q4H A;  4YKL B;  4NDH A;  3FIT A;  1KPF A;  4QDE A;  1ST4 A;  3O1X A;  4QEB A;  1RZY A;  3O0M A;  3O1Z A;  1KPA A;  5IPC A;  1KPE A;  2EO4 A;  3KSV A;  1FHI A;  1XMM A;  5I2F A;  1KPB A;  5FIT A;  3BL7 A;  5ED6 A;  1HXP A;  5CS2 A;  4EGU A;  1XML A;  3R6F A;  4NDI A;  3LB5 A;  4NDG A;  3WO5 A;  1ZWJ A;  5IN3 A;  4XBA A;  3BLA A;  5RHN A;  1AV5 A;  3N1T A;  2FIT A;  3N1S A;  1ST0 A;  4EQH A;  1EMS A;  3SZQ A;  4EQE A;  4NK0 A;  3TW2 A;  1Z84 A;  3BL9 A;  1KPC A;  1HXQ A;  3P0T A;  5IPB A;  5BV3 A;  3RHN A;  2FHI A;  4NJX A;  1Y23 A;  3NRD A;  3OMF A;  3ANO A;  2OIK A;  4NDF A;  4INC A;  5ED3 A;  4ZGL A;  5EMT A;  4NJY A;  3OXK A;  3QGZ A;  4ZKV A;  3OJ7 A;  5I2E A;  1GUQ A;  3SPD A;  5IPD A;  1FIT A;  1GUP A;  6FIT A;  3SP4 A;  4FIT A;  4NJZ A;  4RHN A;  5IPE A;  6RHN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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