1OOYA

Succinyl-coa:3-ketoacid coa transferase from pig heart
Total Genus 144
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
144
sequence length
481
structure length
463
Chain Sequence
TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQVTT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structure of the CoA transferase from pig heart to 1.7 A resolution.
pubmed doi rcsb
molecule tags Transferase
source organism Sus scrofa
molecule keywords Succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondria
total genus 144
structure length 463
sequence length 481
chains with identical sequence B
ec nomenclature ec 2.8.3.5: 3-oxoacid CoA-transferase.
pdb deposition date 2003-03-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01144 CoA_trans Coenzyme A transferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1ooyA01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 1ooyA02
3DLXA 1OOYA 2NRBA 3GK7A 3RRLB 1OOZA 1POIA 1O9LA 1M3EA 3K6MA 5DBNB 2AHVA 2OASA 2AHWA 2NRCA 3CDKB 3RRLA 2AHUA 3OXOA 5DBNA 4KGBA 1OPEA 3QDQA 3EH7A 1POIB 1XR4A 3CDKA 3D3UA 1K6DA 2HJ0A
chains in the Genus database with same CATH superfamily
3DLXA 1OOYA 2NRBA 3GK7A 3RRLB 1OOZA 1POIA 1O9LA 1M3EA 3K6MA 5DBNB 2AHVA 2OASA 2AHWA 2NRCA 3CDKB 3RRLA 2AHUA 3OXOA 5DBNA 4KGBA 1OPEA 3QDQA 3EH7A 1POIB 1XR4A 3CDKA 3D3UA 1K6DA 2HJ0A
chains in the Genus database with same CATH topology
3DLXA 1OOYA 2NRBA 3GK7A 3RRLB 1OOZA 1POIA 1O9LA 1M3EA 3K6MA 5DBNB 2AHVA 2OASA 2AHWA 2NRCA 3CDKB 3RRLA 2AHUA 3OXOA 5DBNA 4KGBA 1OPEA 3QDQA 3EH7A 1POIB 1XR4A 3CDKA 3D3UA 1K6DA 2HJ0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3DLX A;  1OOY A;  2NRB A;  3GK7 A;  3RRL B;  1OOZ A;  1POI A;  1O9L A;  1M3E A;  3K6M A;  5DBN B;  2AHV A;  2OAS A;  2AHW A;  2NRC A;  3CDK B;  3RRL A;  2AHU A;  3OXO A;  5DBN A;  4KGB A;  1OPE A;  3QDQ A;  3EH7 A;  1POI B;  1XR4 A;  3CDK A;  3D3U A;  1K6D A;  2HJ0 A; 
#chains in the Genus database with same CATH topology
 3DLX A;  1OOY A;  2NRB A;  3GK7 A;  3RRL B;  1OOZ A;  1POI A;  1O9L A;  1M3E A;  3K6M A;  5DBN B;  2AHV A;  2OAS A;  2AHW A;  2NRC A;  3CDK B;  3RRL A;  2AHU A;  3OXO A;  5DBN A;  4KGB A;  1OPE A;  3QDQ A;  3EH7 A;  1POI B;  1XR4 A;  3CDK A;  3D3U A;  1K6D A;  2HJ0 A; 
#chains in the Genus database with same CATH homology
 3DLX A;  1OOY A;  2NRB A;  3GK7 A;  3RRL B;  1OOZ A;  1POI A;  1O9L A;  1M3E A;  3K6M A;  5DBN B;  2AHV A;  2OAS A;  2AHW A;  2NRC A;  3CDK B;  3RRL A;  2AHU A;  3OXO A;  5DBN A;  4KGB A;  1OPE A;  3QDQ A;  3EH7 A;  1POI B;  1XR4 A;  3CDK A;  3D3U A;  1K6D A;  2HJ0 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...