3OXOA

Succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa
Total Genus 139
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
480
structure length
469
Chain Sequence
TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Catalytic role of the conformational change in succinyl-CoA:3-oxoacid CoA transferase on binding CoA.
pubmed doi rcsb
molecule tags Transferase
source organism Sus scrofa
molecule keywords Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondr
total genus 139
structure length 469
sequence length 480
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.8.3.5: 3-oxoacid CoA-transferase.
pdb deposition date 2010-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01144 CoA_trans Coenzyme A transferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA02
2NRCA 2HJ0A 1M3EA 3D3UA 1K6DA 1OOZA 3K6MA 3QDQA 1OOYA 3CDKB 3DLXA 3GK7A 2NRBA 1POIA 1OPEA 5DBNA 2OASA 3RRLA 1XR4A 1POIB 5DBNB 3RRLB 3EH7A 2AHWA 4KGBA 3CDKA 1O9LA 2AHVA 2AHUA 3OXOA
chains in the Genus database with same CATH superfamily
2NRCA 2HJ0A 1M3EA 3D3UA 1K6DA 1OOZA 3K6MA 3QDQA 1OOYA 3CDKB 3DLXA 3GK7A 2NRBA 1POIA 1OPEA 5DBNA 2OASA 3RRLA 1XR4A 1POIB 5DBNB 3RRLB 3EH7A 2AHWA 4KGBA 3CDKA 1O9LA 2AHVA 2AHUA 3OXOA
chains in the Genus database with same CATH topology
2NRCA 2HJ0A 1M3EA 3D3UA 1K6DA 1OOZA 3K6MA 3QDQA 1OOYA 3CDKB 3DLXA 3GK7A 2NRBA 1POIA 1OPEA 5DBNA 2OASA 3RRLA 1XR4A 1POIB 5DBNB 3RRLB 3EH7A 2AHWA 4KGBA 3CDKA 1O9LA 2AHVA 2AHUA 3OXOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NRC A;  2HJ0 A;  1M3E A;  3D3U A;  1K6D A;  1OOZ A;  3K6M A;  3QDQ A;  1OOY A;  3CDK B;  3DLX A;  3GK7 A;  2NRB A;  1POI A;  1OPE A;  5DBN A;  2OAS A;  3RRL A;  1XR4 A;  1POI B;  5DBN B;  3RRL B;  3EH7 A;  2AHW A;  4KGB A;  3CDK A;  1O9L A;  2AHV A;  2AHU A;  3OXO A; 
#chains in the Genus database with same CATH topology
 2NRC A;  2HJ0 A;  1M3E A;  3D3U A;  1K6D A;  1OOZ A;  3K6M A;  3QDQ A;  1OOY A;  3CDK B;  3DLX A;  3GK7 A;  2NRB A;  1POI A;  1OPE A;  5DBN A;  2OAS A;  3RRL A;  1XR4 A;  1POI B;  5DBN B;  3RRL B;  3EH7 A;  2AHW A;  4KGB A;  3CDK A;  1O9L A;  2AHV A;  2AHU A;  3OXO A; 
#chains in the Genus database with same CATH homology
 2NRC A;  2HJ0 A;  1M3E A;  3D3U A;  1K6D A;  1OOZ A;  3K6M A;  3QDQ A;  1OOY A;  3CDK B;  3DLX A;  3GK7 A;  2NRB A;  1POI A;  1OPE A;  5DBN A;  2OAS A;  3RRL A;  1XR4 A;  1POI B;  5DBN B;  3RRL B;  3EH7 A;  2AHW A;  4KGB A;  3CDK A;  1O9L A;  2AHV A;  2AHU A;  3OXO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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