4E37A

Crystal structure of p. aeruginosa catalase, kata tetramer
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
479
structure length
478
Chain Sequence
EKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDVPEQIQRRQIGLFLKVDPAYGKGVADALGLKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
source organism Pseudomonas aeruginosa
publication title KatA, the Major Catalase in Pseudomonas aeruginosa, Assists in Protecting Anaerobic Bacteria From Metabolic and Exogenous Nitric Oxide
rcsb
molecule keywords Catalase
total genus 149
structure length 478
sequence length 479
chains with identical sequence B, C, D
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 2012-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 4e37A00
3P9PA 1HBZA 4ENUA 1F4JA 3P9SA 5BV2P 1GGKA 4AUNA 4B2YA 4ENRA 1M7SA 2A9EA 3P9QA 1GWEA 1NM0A 4ENVA 4AUMA 4ENSA 1P80A 4AUEA 1MQFA 3PQ5A 2XQ1A 1GGJA 3PQ7A 1P7ZA 4QOQA 3ZJ4A 1QWLA 1U5UA 1IPHA 1H6NA 3TTUA 4B5KA 1GGEA 1QF7A 4E37A 2J2MA 3TTXA 1A4EA 2CAHA 4CABA 3TTTA 4QOMA 1GG9A 1GWHA 4ENQA 2IUFA 1QWMA 4BFLA 4B7AA 3DY5A 1GWFA 4ENPA 1CF9A 2ISAA 1P7YA 3HB6A 2XF2A 3PQ4A 4QOPA 1M85A 4BIMA 3P9RA 4QORA 4B31A 1SI8A 4AJ9A 2IQFA 4ENWA 3EJ6A 4AULA 3PQ6A 4QONA 3PQ2A 3PQ3A 1GGFA 3TTWA 3TTVA 3ZJ5A 1GGHA 4ENTA 1H7KA 3VU3A 1SY7A 4B40A 3PQ8A 4QOOA 2CAGA 1P81A 1E93A 4QOLA 1QWSA
chains in the Genus database with same CATH superfamily
3P9PA 1HBZA 7CATA 4ENUA 1F4JA 3P9SA 5BV2P 1GGKA 4AUNA 4B2YA 4ENRA 1M7SA 2A9EA 1TH4A 3P9QA 1GWEA 4B7GA 1NM0A 4ENVA 4AUMA 4ENSA 1DGHA 1P80A 1DGHB 1DGFA 4AUEA 8CATA 1MQFA 3PQ5A 2XQ1A 1GGJA 3NWLA 3PQ7A 1P7ZA 4QOQA 3ZJ4A 1QWLA 1U5UA 1IPHA 1H6NA 3TTUA 4B5KA 1GGEA 4BLCA 1QF7A 3RE8A 4E37A 2J2MA 3RGPA 3TTXA 1A4EA 2CAHA 1QQWA 4CABA 3TTTA 4QOMA 1GG9A 3J7BA 1GWHA 4ENQA 2IUFA 1QWMA 4BFLA 1TH3A 4B7AA 4B7HA 3DY5A 1GWFA 4ENPA 1CF9A 3E4WA 2ISAA 1P7YA 3HB6A 2XF2A 3PQ4A 3E4YA 4QOPA 1M85A 4BIMA 3P9RA 4QORA 1TH2A 4B31A 1SI8A 4AJ9A 2IQFA 4ENWA 1DGBA 3EJ6A 4AULA 3PQ6A 4QONA 3PQ2A 3PQ3A 1GGFA 4B7FA 3TTWA 3TTVA 3ZJ5A 1GGHA 1DGGA 4ENTA 1H7KA 3VU3A 1SY7A 4B40A 5GKNA 3PQ8A 4QOOA 3RGSA 1TGUA 2CAGA 1P81A 1E93A 4QOLA 1QWSA
chains in the Genus database with same CATH topology
3P9PA 1HBZA 4ENUA 1F4JA 3P9SA 5BV2P 1GGKA 4AUNA 4B2YA 4ENRA 1M7SA 2A9EA 3P9QA 1GWEA 1NM0A 4ENVA 4AUMA 4ENSA 1P80A 4AUEA 1MQFA 3PQ5A 2XQ1A 1GGJA 3PQ7A 1P7ZA 4QOQA 3ZJ4A 1QWLA 1U5UA 1IPHA 1H6NA 3TTUA 4B5KA 1GGEA 1QF7A 4E37A 2J2MA 3TTXA 1A4EA 2CAHA 4CABA 3TTTA 4QOMA 1GG9A 1GWHA 4ENQA 2IUFA 1QWMA 4BFLA 4B7AA 3DY5A 1GWFA 4ENPA 1CF9A 2ISAA 1P7YA 3HB6A 2XF2A 3PQ4A 4QOPA 1M85A 4BIMA 3P9RA 4QORA 4B31A 1SI8A 4AJ9A 2IQFA 4ENWA 3EJ6A 4AULA 3PQ6A 4QONA 3PQ2A 3PQ3A 1GGFA 3TTWA 3TTVA 3ZJ5A 1GGHA 4ENTA 1H7KA 3VU3A 1SY7A 4B40A 3PQ8A 4QOOA 2CAGA 1P81A 1E93A 4QOLA 1QWSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3P9P A;  1HBZ A;  4ENU A;  1F4J A;  3P9S A;  5BV2 P;  1GGK A;  4AUN A;  4B2Y A;  4ENR A;  1M7S A;  2A9E A;  3P9Q A;  1GWE A;  1NM0 A;  4ENV A;  4AUM A;  4ENS A;  1P80 A;  4AUE A;  1MQF A;  3PQ5 A;  2XQ1 A;  1GGJ A;  3PQ7 A;  1P7Z A;  4QOQ A;  3ZJ4 A;  1QWL A;  1U5U A;  1IPH A;  1H6N A;  3TTU A;  4B5K A;  1GGE A;  1QF7 A;  4E37 A;  2J2M A;  3TTX A;  1A4E A;  2CAH A;  4CAB A;  3TTT A;  4QOM A;  1GG9 A;  1GWH A;  4ENQ A;  2IUF A;  1QWM A;  4BFL A;  4B7A A;  3DY5 A;  1GWF A;  4ENP A;  1CF9 A;  2ISA A;  1P7Y A;  3HB6 A;  2XF2 A;  3PQ4 A;  4QOP A;  1M85 A;  4BIM A;  3P9R A;  4QOR A;  4B31 A;  1SI8 A;  4AJ9 A;  2IQF A;  4ENW A;  3EJ6 A;  4AUL A;  3PQ6 A;  4QON A;  3PQ2 A;  3PQ3 A;  1GGF A;  3TTW A;  3TTV A;  3ZJ5 A;  1GGH A;  4ENT A;  1H7K A;  3VU3 A;  1SY7 A;  4B40 A;  3PQ8 A;  4QOO A;  2CAG A;  1P81 A;  1E93 A;  4QOL A;  1QWS A; 
#chains in the Genus database with same CATH topology
 3P9P A;  1HBZ A;  7CAT A;  4ENU A;  1F4J A;  3P9S A;  5BV2 P;  1GGK A;  4AUN A;  4B2Y A;  4ENR A;  1M7S A;  2A9E A;  1TH4 A;  3P9Q A;  1GWE A;  4B7G A;  1NM0 A;  4ENV A;  4AUM A;  4ENS A;  1DGH A;  1P80 A;  1DGH B;  1DGF A;  4AUE A;  8CAT A;  1MQF A;  3PQ5 A;  2XQ1 A;  1GGJ A;  3NWL A;  3PQ7 A;  1P7Z A;  4QOQ A;  3ZJ4 A;  1QWL A;  1U5U A;  1IPH A;  1H6N A;  3TTU A;  4B5K A;  1GGE A;  4BLC A;  1QF7 A;  3RE8 A;  4E37 A;  2J2M A;  3RGP A;  3TTX A;  1A4E A;  2CAH A;  1QQW A;  4CAB A;  3TTT A;  4QOM A;  1GG9 A;  3J7B A;  1GWH A;  4ENQ A;  2IUF A;  1QWM A;  4BFL A;  1TH3 A;  4B7A A;  4B7H A;  3DY5 A;  1GWF A;  4ENP A;  1CF9 A;  3E4W A;  2ISA A;  1P7Y A;  3HB6 A;  2XF2 A;  3PQ4 A;  3E4Y A;  4QOP A;  1M85 A;  4BIM A;  3P9R A;  4QOR A;  1TH2 A;  4B31 A;  1SI8 A;  4AJ9 A;  2IQF A;  4ENW A;  1DGB A;  3EJ6 A;  4AUL A;  3PQ6 A;  4QON A;  3PQ2 A;  3PQ3 A;  1GGF A;  4B7F A;  3TTW A;  3TTV A;  3ZJ5 A;  1GGH A;  1DGG A;  4ENT A;  1H7K A;  3VU3 A;  1SY7 A;  4B40 A;  5GKN A;  3PQ8 A;  4QOO A;  3RGS A;  1TGU A;  2CAG A;  1P81 A;  1E93 A;  4QOL A;  1QWS A; 
#chains in the Genus database with same CATH homology
 3P9P A;  1HBZ A;  4ENU A;  1F4J A;  3P9S A;  5BV2 P;  1GGK A;  4AUN A;  4B2Y A;  4ENR A;  1M7S A;  2A9E A;  3P9Q A;  1GWE A;  1NM0 A;  4ENV A;  4AUM A;  4ENS A;  1P80 A;  4AUE A;  1MQF A;  3PQ5 A;  2XQ1 A;  1GGJ A;  3PQ7 A;  1P7Z A;  4QOQ A;  3ZJ4 A;  1QWL A;  1U5U A;  1IPH A;  1H6N A;  3TTU A;  4B5K A;  1GGE A;  1QF7 A;  4E37 A;  2J2M A;  3TTX A;  1A4E A;  2CAH A;  4CAB A;  3TTT A;  4QOM A;  1GG9 A;  1GWH A;  4ENQ A;  2IUF A;  1QWM A;  4BFL A;  4B7A A;  3DY5 A;  1GWF A;  4ENP A;  1CF9 A;  2ISA A;  1P7Y A;  3HB6 A;  2XF2 A;  3PQ4 A;  4QOP A;  1M85 A;  4BIM A;  3P9R A;  4QOR A;  4B31 A;  1SI8 A;  4AJ9 A;  2IQF A;  4ENW A;  3EJ6 A;  4AUL A;  3PQ6 A;  4QON A;  3PQ2 A;  3PQ3 A;  1GGF A;  3TTW A;  3TTV A;  3ZJ5 A;  1GGH A;  4ENT A;  1H7K A;  3VU3 A;  1SY7 A;  4B40 A;  3PQ8 A;  4QOO A;  2CAG A;  1P81 A;  1E93 A;  4QOL A;  1QWS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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