4E37A

Crystal structure of p. aeruginosa catalase, kata tetramer
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
479
structure length
478
Chain Sequence
b'EKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRHAKGSAAYGTFTVTHDITPYTRAKIFSQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDVPEQIQRRQIGLFLKVDPAYGKGVADALGLKL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Catalase
publication title KatA, the Major Catalase in Pseudomonas aeruginosa, Assists in Protecting Anaerobic Bacteria From Metabolic and Exogenous Nitric Oxide
rcsb
source organism Pseudomonas aeruginosa
molecule tags Oxidoreductase
total genus 149
structure length 478
sequence length 479
chains with identical sequence B, C, D
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 2012-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 4e37A00
2A9EA 1QWLA 4QOLA 3ZJ4A 1GWFA 1A4EA 1F4JA 3DY5A 4B2YA 1M85A 3PQ3A 4ENSA 4CABA 1E93A 1GWEA 4ENQA 3TTWA 2XF2A 1P80A 3PQ4A 4QORA 4E37A 2CAHA 4B31A 4B5KA 1P81A 3PQ5A 1QWSA 1IPHA 4B7AA 4ENRA 3ZJ5A 1GGEA 3VU3A 4AUMA 1P7ZA 3TTTA 1GGFA 4QONA 1NM0A 2XQ1A 2IUFA 4QOQA 3HB6A 4AUNA 4B40A 3EJ6A 4ENWA 2CAGA 3P9PA 3P9QA 3PQ2A 4AJ9A 4ENVA 1U5UA 1GGHA 5BV2P 1H7KA 4AULA 4BIMA 4ENUA 3PQ6A 4ENPA 1P7YA 1GG9A 4QOMA 1CF9A 2ISAA 1MQFA 1QWMA 4QOOA 1SI8A 1HBZA 1SY7A 3PQ8A 2J2MA 4AUEA 1H6NA 3P9SA 3P9RA 1M7SA 4QOPA 1QF7A 3TTXA 4ENTA 1GWHA 2IQFA 3PQ7A 1GGJA 1GGKA 3TTUA 4BFLA 3TTVA
chains in the Genus database with same CATH superfamily
2A9EA 1QWLA 4QOLA 3RGSA 3ZJ4A 1GWFA 1A4EA 4BLCA 1F4JA 3DY5A 4B2YA 1M85A 3PQ3A 4ENSA 1DGHA 4CABA 1E93A 1GWEA 4ENQA 3TTWA 2XF2A 1P80A 3NWLA 4B7HA 3PQ4A 4QORA 4E37A 2CAHA 3E4YA 1TGUA 4B31A 1DGHB 4B5KA 1P81A 3PQ5A 1QWSA 1IPHA 4B7AA 4ENRA 1DGBA 1DGGA 3ZJ5A 1GGEA 4B7FA 3VU3A 4B7GA 4AUMA 1P7ZA 3TTTA 1GGFA 3J7BA 4QONA 1NM0A 2XQ1A 2IUFA 4QOQA 3HB6A 4AUNA 4B40A 3EJ6A 4ENWA 2CAGA 3P9PA 3P9QA 3PQ2A 4AJ9A 4ENVA 1U5UA 1GGHA 8CATA 1TH2A 5BV2P 1H7KA 4AULA 4BIMA 4ENUA 1QQWA 3PQ6A 1TH3A 4ENPA 1P7YA 1GG9A 3RGPA 4QOMA 1CF9A 3E4WA 2ISAA 1MQFA 1QWMA 4QOOA 1SI8A 1HBZA 1SY7A 3PQ8A 2J2MA 4AUEA 1H6NA 3P9SA 7CATA 3P9RA 1M7SA 4QOPA 1QF7A 3TTXA 4ENTA 1GWHA 2IQFA 3PQ7A 5GKNA 1DGFA 1GGJA 1GGKA 3TTUA 3RE8A 4BFLA 3TTVA 1TH4A
chains in the Genus database with same CATH topology
2A9EA 1QWLA 4QOLA 3ZJ4A 1GWFA 1A4EA 1F4JA 3DY5A 4B2YA 1M85A 3PQ3A 4ENSA 4CABA 1E93A 1GWEA 4ENQA 3TTWA 2XF2A 1P80A 3PQ4A 4QORA 4E37A 2CAHA 4B31A 4B5KA 1P81A 3PQ5A 1QWSA 1IPHA 4B7AA 4ENRA 3ZJ5A 1GGEA 3VU3A 4AUMA 1P7ZA 3TTTA 1GGFA 4QONA 1NM0A 2XQ1A 2IUFA 4QOQA 3HB6A 4AUNA 4B40A 3EJ6A 4ENWA 2CAGA 3P9PA 3P9QA 3PQ2A 4AJ9A 4ENVA 1U5UA 1GGHA 5BV2P 1H7KA 4AULA 4BIMA 4ENUA 3PQ6A 4ENPA 1P7YA 1GG9A 4QOMA 1CF9A 2ISAA 1MQFA 1QWMA 4QOOA 1SI8A 1HBZA 1SY7A 3PQ8A 2J2MA 4AUEA 1H6NA 3P9SA 3P9RA 1M7SA 4QOPA 1QF7A 3TTXA 4ENTA 1GWHA 2IQFA 3PQ7A 1GGJA 1GGKA 3TTUA 4BFLA 3TTVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A9E A;  1QWL A;  4QOL A;  3ZJ4 A;  1GWF A;  1A4E A;  1F4J A;  3DY5 A;  4B2Y A;  1M85 A;  3PQ3 A;  4ENS A;  4CAB A;  1E93 A;  1GWE A;  4ENQ A;  3TTW A;  2XF2 A;  1P80 A;  3PQ4 A;  4QOR A;  4E37 A;  2CAH A;  4B31 A;  4B5K A;  1P81 A;  3PQ5 A;  1QWS A;  1IPH A;  4B7A A;  4ENR A;  3ZJ5 A;  1GGE A;  3VU3 A;  4AUM A;  1P7Z A;  3TTT A;  1GGF A;  4QON A;  1NM0 A;  2XQ1 A;  2IUF A;  4QOQ A;  3HB6 A;  4AUN A;  4B40 A;  3EJ6 A;  4ENW A;  2CAG A;  3P9P A;  3P9Q A;  3PQ2 A;  4AJ9 A;  4ENV A;  1U5U A;  1GGH A;  5BV2 P;  1H7K A;  4AUL A;  4BIM A;  4ENU A;  3PQ6 A;  4ENP A;  1P7Y A;  1GG9 A;  4QOM A;  1CF9 A;  2ISA A;  1MQF A;  1QWM A;  4QOO A;  1SI8 A;  1HBZ A;  1SY7 A;  3PQ8 A;  2J2M A;  4AUE A;  1H6N A;  3P9S A;  3P9R A;  1M7S A;  4QOP A;  1QF7 A;  3TTX A;  4ENT A;  1GWH A;  2IQF A;  3PQ7 A;  1GGJ A;  1GGK A;  3TTU A;  4BFL A;  3TTV A; 
#chains in the Genus database with same CATH topology
 2A9E A;  1QWL A;  4QOL A;  3RGS A;  3ZJ4 A;  1GWF A;  1A4E A;  4BLC A;  1F4J A;  3DY5 A;  4B2Y A;  1M85 A;  3PQ3 A;  4ENS A;  1DGH A;  4CAB A;  1E93 A;  1GWE A;  4ENQ A;  3TTW A;  2XF2 A;  1P80 A;  3NWL A;  4B7H A;  3PQ4 A;  4QOR A;  4E37 A;  2CAH A;  3E4Y A;  1TGU A;  4B31 A;  1DGH B;  4B5K A;  1P81 A;  3PQ5 A;  1QWS A;  1IPH A;  4B7A A;  4ENR A;  1DGB A;  1DGG A;  3ZJ5 A;  1GGE A;  4B7F A;  3VU3 A;  4B7G A;  4AUM A;  1P7Z A;  3TTT A;  1GGF A;  3J7B A;  4QON A;  1NM0 A;  2XQ1 A;  2IUF A;  4QOQ A;  3HB6 A;  4AUN A;  4B40 A;  3EJ6 A;  4ENW A;  2CAG A;  3P9P A;  3P9Q A;  3PQ2 A;  4AJ9 A;  4ENV A;  1U5U A;  1GGH A;  8CAT A;  1TH2 A;  5BV2 P;  1H7K A;  4AUL A;  4BIM A;  4ENU A;  1QQW A;  3PQ6 A;  1TH3 A;  4ENP A;  1P7Y A;  1GG9 A;  3RGP A;  4QOM A;  1CF9 A;  3E4W A;  2ISA A;  1MQF A;  1QWM A;  4QOO A;  1SI8 A;  1HBZ A;  1SY7 A;  3PQ8 A;  2J2M A;  4AUE A;  1H6N A;  3P9S A;  7CAT A;  3P9R A;  1M7S A;  4QOP A;  1QF7 A;  3TTX A;  4ENT A;  1GWH A;  2IQF A;  3PQ7 A;  5GKN A;  1DGF A;  1GGJ A;  1GGK A;  3TTU A;  3RE8 A;  4BFL A;  3TTV A;  1TH4 A; 
#chains in the Genus database with same CATH homology
 2A9E A;  1QWL A;  4QOL A;  3ZJ4 A;  1GWF A;  1A4E A;  1F4J A;  3DY5 A;  4B2Y A;  1M85 A;  3PQ3 A;  4ENS A;  4CAB A;  1E93 A;  1GWE A;  4ENQ A;  3TTW A;  2XF2 A;  1P80 A;  3PQ4 A;  4QOR A;  4E37 A;  2CAH A;  4B31 A;  4B5K A;  1P81 A;  3PQ5 A;  1QWS A;  1IPH A;  4B7A A;  4ENR A;  3ZJ5 A;  1GGE A;  3VU3 A;  4AUM A;  1P7Z A;  3TTT A;  1GGF A;  4QON A;  1NM0 A;  2XQ1 A;  2IUF A;  4QOQ A;  3HB6 A;  4AUN A;  4B40 A;  3EJ6 A;  4ENW A;  2CAG A;  3P9P A;  3P9Q A;  3PQ2 A;  4AJ9 A;  4ENV A;  1U5U A;  1GGH A;  5BV2 P;  1H7K A;  4AUL A;  4BIM A;  4ENU A;  3PQ6 A;  4ENP A;  1P7Y A;  1GG9 A;  4QOM A;  1CF9 A;  2ISA A;  1MQF A;  1QWM A;  4QOO A;  1SI8 A;  1HBZ A;  1SY7 A;  3PQ8 A;  2J2M A;  4AUE A;  1H6N A;  3P9S A;  3P9R A;  1M7S A;  4QOP A;  1QF7 A;  3TTX A;  4ENT A;  1GWH A;  2IQF A;  3PQ7 A;  1GGJ A;  1GGK A;  3TTU A;  4BFL A;  3TTV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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