3LAAA

Crystal structure of the trimeric autotransporter adhesin head domain bpaa from burkholderia pseudomallei
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
174
structure length
169
Chain Sequence
STSISSITTNTTNLGNSTAAALGGGATYDPATGAISAPSYTTYNANGTTATNTSVGAAIDNINANGIKYFHANSTDPDSVATGTNSVAIGPNAVANVDYSVAIGSGATTSAAVPVASASFGGFAGSAPIGVFSVGAPGAERQITNVAAGRISAASTDAVNGSQLYATNS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Haemagglutinin family protein
publication title Structure of a Burkholderia pseudomallei trimeric autotransporter adhesin head.
pubmed doi rcsb
source organism Burkholderia pseudomallei
total genus 38
structure length 169
sequence length 174
ec nomenclature
pdb deposition date 2010-01-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.150.10.10 Mainly Beta 2 Solenoid Alkaline Protease, subunit P, domain 1 Serralysin-like metalloprotease, C-terminal 3laaA00
1GO7P 2ZJ7A 2YO0A 1SMPA 5CXLA 1O0QA 3VI1A 1OM7A 1OM6A 3A6ZA 2ZVDA 3HB2P 4I35A 3U1RA 1AKLA 2YO1A 3NTNA 1P9HA 3HBVP 2Z8ZA 1GO8P 1K7QA 2Z8XA 5D7WA 2XQHA 1G9KA 1AF0A 2AGMA 1OMJA 1H71P 2QUBA 1K7GA 1K7IA 1OM8A 5CVWA 3LA9A 2ZJ6A 3S6LA 3HDAP 3LAAA 1SRPA 1JIWP 1O0TA 1KAPP 1SATA 3A70A 3HBUP 3WP8A 3ULTA 2ML2A 2QUAA
chains in the Genus database with same CATH superfamily
1GO7P 2ZJ7A 2YO0A 1SMPA 5CXLA 1O0QA 3VI1A 1OM7A 1OM6A 3A6ZA 2ZVDA 3HB2P 4I35A 3U1RA 1AKLA 2YO1A 3NTNA 1P9HA 3HBVP 2Z8ZA 1GO8P 1K7QA 2Z8XA 5D7WA 2XQHA 1G9KA 1AF0A 2AGMA 1OMJA 1H71P 2QUBA 1K7GA 1K7IA 1OM8A 5CVWA 3LA9A 2ZJ6A 3S6LA 3HDAP 3LAAA 4DT5A 1SRPA 1JIWP 1O0TA 1KAPP 1SATA 3A70A 3HBUP 3WP8A 3ULTA 2ML2A 2QUAA
chains in the Genus database with same CATH topology
1GO7P 2ZJ7A 2YO0A 1SMPA 5CXLA 1O0QA 3VI1A 1OM7A 1OM6A 3A6ZA 2ZVDA 3HB2P 4I35A 3U1RA 1AKLA 2YO1A 3NTNA 1P9HA 3HBVP 2Z8ZA 1GO8P 1K7QA 2Z8XA 5D7WA 2XQHA 1G9KA 1AF0A 2AGMA 1OMJA 1H71P 2QUBA 1K7GA 1K7IA 1OM8A 5CVWA 3LA9A 2ZJ6A 3S6LA 3HDAP 3LAAA 1SRPA 1JIWP 1O0TA 1KAPP 1SATA 3A70A 3HBUP 3WP8A 3ULTA 2ML2A 2QUAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1GO7 P;  2ZJ7 A;  2YO0 A;  1SMP A;  5CXL A;  1O0Q A;  3VI1 A;  1OM7 A;  1OM6 A;  3A6Z A;  2ZVD A;  3HB2 P;  4I35 A;  3U1R A;  1AKL A;  2YO1 A;  3NTN A;  1P9H A;  3HBV P;  2Z8Z A;  1GO8 P;  1K7Q A;  2Z8X A;  5D7W A;  2XQH A;  1G9K A;  1AF0 A;  2AGM A;  1OMJ A;  1H71 P;  2QUB A;  1K7G A;  1K7I A;  1OM8 A;  5CVW A;  3LA9 A;  2ZJ6 A;  3S6L A;  3HDA P;  3LAA A;  1SRP A;  1JIW P;  1O0T A;  1KAP P;  1SAT A;  3A70 A;  3HBU P;  3WP8 A;  3ULT A;  2ML2 A;  2QUA A; 
#chains in the Genus database with same CATH topology
 1GO7 P;  2ZJ7 A;  2YO0 A;  1SMP A;  5CXL A;  1O0Q A;  3VI1 A;  1OM7 A;  1OM6 A;  3A6Z A;  2ZVD A;  3HB2 P;  4I35 A;  3U1R A;  1AKL A;  2YO1 A;  3NTN A;  1P9H A;  3HBV P;  2Z8Z A;  1GO8 P;  1K7Q A;  2Z8X A;  5D7W A;  2XQH A;  1G9K A;  1AF0 A;  2AGM A;  1OMJ A;  1H71 P;  2QUB A;  1K7G A;  1K7I A;  1OM8 A;  5CVW A;  3LA9 A;  2ZJ6 A;  3S6L A;  3HDA P;  3LAA A;  4DT5 A;  1SRP A;  1JIW P;  1O0T A;  1KAP P;  1SAT A;  3A70 A;  3HBU P;  3WP8 A;  3ULT A;  2ML2 A;  2QUA A; 
#chains in the Genus database with same CATH homology
 1GO7 P;  2ZJ7 A;  2YO0 A;  1SMP A;  5CXL A;  1O0Q A;  3VI1 A;  1OM7 A;  1OM6 A;  3A6Z A;  2ZVD A;  3HB2 P;  4I35 A;  3U1R A;  1AKL A;  2YO1 A;  3NTN A;  1P9H A;  3HBV P;  2Z8Z A;  1GO8 P;  1K7Q A;  2Z8X A;  5D7W A;  2XQH A;  1G9K A;  1AF0 A;  2AGM A;  1OMJ A;  1H71 P;  2QUB A;  1K7G A;  1K7I A;  1OM8 A;  5CVW A;  3LA9 A;  2ZJ6 A;  3S6L A;  3HDA P;  3LAA A;  1SRP A;  1JIW P;  1O0T A;  1KAP P;  1SAT A;  3A70 A;  3HBU P;  3WP8 A;  3ULT A;  2ML2 A;  2QUA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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