1CZY | Genus

Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	37
sequence length	168
structure length	168
Chain Sequence	AMADLEQKVLEMEASTYDGVFIWKISDFPRKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 168 atoms

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1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

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168 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Apoptosis
source organism	Homo sapiens
publication title	The structural basis for the recognition of diverse receptor sequences by TRAF2. pubmed doi rcsb
molecule keywords	TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2
total genus	37
structure length	168
sequence length	168
chains with identical sequence	B, C
ec nomenclature	ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date	1999-09-07

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.60.210.10	Mainly Beta	Sandwich	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	1czyA00

1K2FA 4KG9A 3HQMA 1FLKA 1F3VB 1FLLA 3MQRA 4GJHA 1KZZA 4GWNA 1D0AA 1YY6A 4X3GA 4Z8MA 4I7DA 3ZJBA 4YSIA 1LB5A 2GKWA 4GWMA 3HU6A 2FOOA 3HQLA 3HQIA 1CA9A 2FOPA 4JJQA 1CZZA 2F1WA 2CR2A 1QSCA 2AN6A 2A25A 4GHUA 5E1TA 1D0JA 3IVVA 3MQSC 3IVBA 1D01A 1LB6A 1ZMSA 2FOJA 4O1VA 3IVQA 2F1ZA 4K8UA 2F1XA 1L0AA 4M4EA 3HSVA 2XXNA 4CA1A 2F1YA 1D00A 1CZYA 1LB4A 1RF3A 4C9ZA 4I7CA 1YZEA 4I7BA 1CA4A 3HQHA 5H9MA
chains in the Genus database with same CATH superfamily

#chains in the Genus database with same CATH superfamily
 1K2F A;  4KG9 A;  3HQM A;  1FLK A;  1F3V B;  1FLL A;  3MQR A;  4GJH A;  1KZZ A;  4GWN A;  1D0A A;  1YY6 A;  4X3G A;  4Z8M A;  4I7D A;  3ZJB A;  4YSI A;  1LB5 A;  2GKW A;  4GWM A;  3HU6 A;  2FOO A;  3HQL A;  3HQI A;  1CA9 A;  2FOP A;  4JJQ A;  1CZZ A;  2F1W A;  2CR2 A;  1QSC A;  2AN6 A;  2A25 A;  4GHU A;  5E1T A;  1D0J A;  3IVV A;  3MQS C;  3IVB A;  1D01 A;  1LB6 A;  1ZMS A;  2FOJ A;  4O1V A;  3IVQ A;  2F1Z A;  4K8U A;  2F1X A;  1L0A A;  4M4E A;  3HSV A;  2XXN A;  4CA1 A;  2F1Y A;  1D00 A;  1CZY A;  1LB4 A;  1RF3 A;  4C9Z A;  4I7C A;  1YZE A;  4I7B A;  1CA4 A;  3HQH A;  5H9M A; 
#chains in the Genus database with same CATH topology
 1K2F A;  4KG9 A;  3HQM A;  1FLK A;  1F3V B;  1FLL A;  3MQR A;  4GJH A;  1KZZ A;  4GWN A;  1D0A A;  1YY6 A;  4X3G A;  4Z8M A;  4I7D A;  3ZJB A;  4YSI A;  1LB5 A;  2GKW A;  4GWM A;  3HU6 A;  2FOO A;  3HQL A;  3HQI A;  1CA9 A;  2FOP A;  4JJQ A;  1CZZ A;  2F1W A;  2CR2 A;  1QSC A;  2AN6 A;  2A25 A;  4GHU A;  5E1T A;  1D0J A;  3IVV A;  3MQS C;  3IVB A;  1D01 A;  1LB6 A;  1ZMS A;  2FOJ A;  4O1V A;  3IVQ A;  2F1Z A;  4K8U A;  2F1X A;  1L0A A;  4M4E A;  3HSV A;  2XXN A;  4CA1 A;  2F1Y A;  1D00 A;  1CZY A;  1LB4 A;  1RF3 A;  4C9Z A;  4I7C A;  1YZE A;  4I7B A;  1CA4 A;  3HQH A;  5H9M A; 
#chains in the Genus database with same CATH homology
 1K2F A;  4KG9 A;  3HQM A;  1FLK A;  1F3V B;  1FLL A;  3MQR A;  4GJH A;  1KZZ A;  4GWN A;  1D0A A;  1YY6 A;  4X3G A;  4Z8M A;  4I7D A;  3ZJB A;  4YSI A;  1LB5 A;  2GKW A;  4GWM A;  3HU6 A;  2FOO A;  3HQL A;  3HQI A;  1CA9 A;  2FOP A;  4JJQ A;  1CZZ A;  2F1W A;  2CR2 A;  1QSC A;  2AN6 A;  2A25 A;  4GHU A;  5E1T A;  1D0J A;  3IVV A;  3MQS C;  3IVB A;  1D01 A;  1LB6 A;  1ZMS A;  2FOJ A;  4O1V A;  3IVQ A;  2F1Z A;  4K8U A;  2F1X A;  1L0A A;  4M4E A;  3HSV A;  2XXN A;  4CA1 A;  2F1Y A;  1D00 A;  1CZY A;  1LB4 A;  1RF3 A;  4C9Z A;  4I7C A;  1YZE A;  4I7B A;  1CA4 A;  3HQH A;  5H9M A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1CZYA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization