2L7NA

Nmr structure of the b domain of talin
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
168
structure length
168
Chain Sequence
GIDPFTGPLEMDSALSVVQNLEKDLQEIKAAARDGKLKPLPGETMEKCTQDLGNSTKAVSSAIAKLLGEIAQGNENYAGIAARDVAGGLRSLAQAARGVAALTSDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPGDPESQQRLAQVAKAVTQALNRCVSCLPGQR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title RIAM and vinculin binding to talin are mutually exclusive and regulate adhesion assembly and turnover.
pubmed doi rcsb
molecule tags Structural protein
source organism Mus musculus
molecule keywords Talin-1
total genus 69
structure length 168
sequence length 168
ec nomenclature
pdb deposition date 2010-12-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1420.10 Mainly Alpha Up-down Bundle A middle domain of Talin 1 Talin, central domain 2l7nA00
1SJ8A 2X0CA 2L10A 3AY5A 3FYQA 2L7NA 3DYJA 4W8PA 2KBBA 2KVPA 4F7GB 1SJ7A 5FZTA 2KGXA
chains in the Genus database with same CATH superfamily
2X0CA 5JDNA 2XQYA 5JDGA 2KBBA 2KVPA 4BGOA 1SJ8A 4ECGA 5JDLA 3DYJA 5HXRA 5T1DA 3WSCA 4W8PA 3PHF1 4ONRA 5FZTA 5HXCA 5HXEA 3VJZA 5HXSA 5HYAA 3V5UA 5JDFA 3AT7A 3WURA 2MTCA 2KGXA 4F7GB 2L10A 3AY5A 3FYQA 2L7NA 5HWYA 5HWXA 3PF0A 3V5SA 5HXHA 3M1CA 5JDHA 1SJ7A 5JDQA 5JDMA 2LQUA
chains in the Genus database with same CATH topology
1SJ8A 2X0CA 2L10A 3AY5A 3FYQA 2L7NA 3DYJA 4W8PA 2KBBA 2KVPA 4F7GB 1SJ7A 5FZTA 2KGXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SJ8 A;  2X0C A;  2L10 A;  3AY5 A;  3FYQ A;  2L7N A;  3DYJ A;  4W8P A;  2KBB A;  2KVP A;  4F7G B;  1SJ7 A;  5FZT A;  2KGX A; 
#chains in the Genus database with same CATH topology
 2X0C A;  5JDN A;  2XQY A;  5JDG A;  2KBB A;  2KVP A;  4BGO A;  1SJ8 A;  4ECG A;  5JDL A;  3DYJ A;  5HXR A;  5T1D A;  3WSC A;  4W8P A;  3PHF 1;  4ONR A;  5FZT A;  5HXC A;  5HXE A;  3VJZ A;  5HXS A;  5HYA A;  3V5U A;  5JDF A;  3AT7 A;  3WUR A;  2MTC A;  2KGX A;  4F7G B;  2L10 A;  3AY5 A;  3FYQ A;  2L7N A;  5HWY A;  5HWX A;  3PF0 A;  3V5S A;  5HXH A;  3M1C A;  5JDH A;  1SJ7 A;  5JDQ A;  5JDM A;  2LQU A; 
#chains in the Genus database with same CATH homology
 1SJ8 A;  2X0C A;  2L10 A;  3AY5 A;  3FYQ A;  2L7N A;  3DYJ A;  4W8P A;  2KBB A;  2KVP A;  4F7G B;  1SJ7 A;  5FZT A;  2KGX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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