3SLHA

1.70 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii in complex with shikimate-3-phosphate and glyphosate
Total Genus 147
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
436
structure length
436
Chain Sequence
AMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQKDKQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title 1.70 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase(AroA) from Coxiella burnetii in complex with shikimate-3-phosphate and glyphosate
rcsb
molecule tags Transferase
source organism Coxiella burnetii
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
total genus 147
structure length 436
sequence length 436
chains with identical sequence B, C, D
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2011-06-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3slhA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3slhA01
5U4HA 3SG1A 1UAEA 1RYWA 3SLHA 3V5VA 2QFTA 3FK1A 3FK0A 2YVWA 4E7DA 2RL2A 5BS5A 4E7GA 1YBGA 2GG6A 1X8TA 3FJZA 3NVSA 4EGRA 2QFQA 3KQAA 2PQ9A 3V4TA 2QFSA 4E7CA 1P89A 2BJBA 2AAYA 1A2NA 1RF5A 2RL1A 1Q36A 1DLGA 1G6SA 3ISSA 1Q3GA 3R38A 2PQDA 4EIIA 2O0ZA 3ZH4A 3TR1A 2AA9A 5BQ2A 3SWEA 2QFUA 2GGDA 3SU9A 1X8RA 2O0BA 3SWQA 4E7FA 3ROIA 4R7UA 4GFPA 3SWAA 2O15A 4ZNDA 2O0EA 3TI2A 1RF6A 3FJXA 2Z2CA 2GGAA 4FQDA 2GG4A 1NAWA 1P88A 3VCYA 1RF4A 1EJCA 3LTHA 4E7BA 3SWDA 2O0DA 4N3PA 3KQJA 3UPKA 2O0XA 2PQBA 4E7EA 2PQCA 3KR6A 3SWIA 1EJDA 3RMTA 5BUFA 3ZH3A 3SWGA 1G6TA 1MI4A 3SPBA 1EYNA
chains in the Genus database with same CATH superfamily
5U4HA 3TW3A 3SG1A 4O89A 1UAEA 1RYWA 3SLHA 3V5VA 2QFTA 3FK1A 3FK0A 2YVWA 4E7DA 2RL2A 5BS5A 4E7GA 1YBGA 2GG6A 1X8TA 3FJZA 3NVSA 1QMIA 4EGRA 2QFQA 3KQAA 2PQ9A 3V4TA 2QFSA 4E7CA 1P89A 2BJBA 2AAYA 1A2NA 1RF5A 2RL1A 1Q36A 1DLGA 1G6SA 3ISSA 3KGDA 3TUTA 1Q3GA 3R38A 2PQDA 4EIIA 3TV1A 4O8JA 2O0ZA 3ZH4A 3TR1A 2AA9A 5BQ2A 3SWEA 2QFUA 2GGDA 3SU9A 1X8RA 2O0BA 3SWQA 4E7FA 3ROIA 4R7UA 4GFPA 3SWAA 2O15A 4ZNDA 2O0EA 3TI2A 1RF6A 3FJXA 2Z2CA 3PQVA 2GGAA 4FQDA 2GG4A 1NAWA 1P88A 3VCYA 1QMHA 1RF4A 1EJCA 3LTHA 4E7BA 3SWDA 2O0DA 4N3PA 3TUXA 3KQJA 3UPKA 2O0XA 4CLQA 2PQBA 4E7EA 2PQCA 3KR6A 3SWIA 1EJDA 3RMTA 5BUFA 3ZH3A 3SWGA 1G6TA 1MI4A 3SPBA 1EYNA
chains in the Genus database with same CATH topology
5U4HA 3SG1A 1UAEA 1RYWA 3SLHA 3V5VA 2QFTA 3FK1A 3FK0A 2YVWA 4E7DA 2RL2A 5BS5A 4E7GA 1YBGA 2GG6A 1X8TA 3FJZA 3NVSA 4EGRA 2QFQA 3KQAA 2PQ9A 3V4TA 2QFSA 4E7CA 1P89A 2BJBA 2AAYA 1A2NA 1RF5A 2RL1A 1Q36A 1DLGA 1G6SA 3ISSA 1Q3GA 3R38A 2PQDA 4EIIA 2O0ZA 3ZH4A 3TR1A 2AA9A 5BQ2A 3SWEA 2QFUA 2GGDA 3SU9A 1X8RA 2O0BA 3SWQA 4E7FA 3ROIA 4R7UA 4GFPA 3SWAA 2O15A 4ZNDA 2O0EA 3TI2A 1RF6A 3FJXA 2Z2CA 2GGAA 4FQDA 2GG4A 1NAWA 1P88A 3VCYA 1RF4A 1EJCA 3LTHA 4E7BA 3SWDA 2O0DA 4N3PA 3KQJA 3UPKA 2O0XA 2PQBA 4E7EA 2PQCA 3KR6A 3SWIA 1EJDA 3RMTA 5BUFA 3ZH3A 3SWGA 1G6TA 1MI4A 3SPBA 1EYNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5U4H A;  3SG1 A;  1UAE A;  1RYW A;  3SLH A;  3V5V A;  2QFT A;  3FK1 A;  3FK0 A;  2YVW A;  4E7D A;  2RL2 A;  5BS5 A;  4E7G A;  1YBG A;  2GG6 A;  1X8T A;  3FJZ A;  3NVS A;  4EGR A;  2QFQ A;  3KQA A;  2PQ9 A;  3V4T A;  2QFS A;  4E7C A;  1P89 A;  2BJB A;  2AAY A;  1A2N A;  1RF5 A;  2RL1 A;  1Q36 A;  1DLG A;  1G6S A;  3ISS A;  1Q3G A;  3R38 A;  2PQD A;  4EII A;  2O0Z A;  3ZH4 A;  3TR1 A;  2AA9 A;  5BQ2 A;  3SWE A;  2QFU A;  2GGD A;  3SU9 A;  1X8R A;  2O0B A;  3SWQ A;  4E7F A;  3ROI A;  4R7U A;  4GFP A;  3SWA A;  2O15 A;  4ZND A;  2O0E A;  3TI2 A;  1RF6 A;  3FJX A;  2Z2C A;  2GGA A;  4FQD A;  2GG4 A;  1NAW A;  1P88 A;  3VCY A;  1RF4 A;  1EJC A;  3LTH A;  4E7B A;  3SWD A;  2O0D A;  4N3P A;  3KQJ A;  3UPK A;  2O0X A;  2PQB A;  4E7E A;  2PQC A;  3KR6 A;  3SWI A;  1EJD A;  3RMT A;  5BUF A;  3ZH3 A;  3SWG A;  1G6T A;  1MI4 A;  3SPB A;  1EYN A; 
#chains in the Genus database with same CATH topology
 5U4H A;  3TW3 A;  3SG1 A;  4O89 A;  1UAE A;  1RYW A;  3SLH A;  3V5V A;  2QFT A;  3FK1 A;  3FK0 A;  2YVW A;  4E7D A;  2RL2 A;  5BS5 A;  4E7G A;  1YBG A;  2GG6 A;  1X8T A;  3FJZ A;  3NVS A;  1QMI A;  4EGR A;  2QFQ A;  3KQA A;  2PQ9 A;  3V4T A;  2QFS A;  4E7C A;  1P89 A;  2BJB A;  2AAY A;  1A2N A;  1RF5 A;  2RL1 A;  1Q36 A;  1DLG A;  1G6S A;  3ISS A;  3KGD A;  3TUT A;  1Q3G A;  3R38 A;  2PQD A;  4EII A;  3TV1 A;  4O8J A;  2O0Z A;  3ZH4 A;  3TR1 A;  2AA9 A;  5BQ2 A;  3SWE A;  2QFU A;  2GGD A;  3SU9 A;  1X8R A;  2O0B A;  3SWQ A;  4E7F A;  3ROI A;  4R7U A;  4GFP A;  3SWA A;  2O15 A;  4ZND A;  2O0E A;  3TI2 A;  1RF6 A;  3FJX A;  2Z2C A;  3PQV A;  2GGA A;  4FQD A;  2GG4 A;  1NAW A;  1P88 A;  3VCY A;  1QMH A;  1RF4 A;  1EJC A;  3LTH A;  4E7B A;  3SWD A;  2O0D A;  4N3P A;  3TUX A;  3KQJ A;  3UPK A;  2O0X A;  4CLQ A;  2PQB A;  4E7E A;  2PQC A;  3KR6 A;  3SWI A;  1EJD A;  3RMT A;  5BUF A;  3ZH3 A;  3SWG A;  1G6T A;  1MI4 A;  3SPB A;  1EYN A; 
#chains in the Genus database with same CATH homology
 5U4H A;  3SG1 A;  1UAE A;  1RYW A;  3SLH A;  3V5V A;  2QFT A;  3FK1 A;  3FK0 A;  2YVW A;  4E7D A;  2RL2 A;  5BS5 A;  4E7G A;  1YBG A;  2GG6 A;  1X8T A;  3FJZ A;  3NVS A;  4EGR A;  2QFQ A;  3KQA A;  2PQ9 A;  3V4T A;  2QFS A;  4E7C A;  1P89 A;  2BJB A;  2AAY A;  1A2N A;  1RF5 A;  2RL1 A;  1Q36 A;  1DLG A;  1G6S A;  3ISS A;  1Q3G A;  3R38 A;  2PQD A;  4EII A;  2O0Z A;  3ZH4 A;  3TR1 A;  2AA9 A;  5BQ2 A;  3SWE A;  2QFU A;  2GGD A;  3SU9 A;  1X8R A;  2O0B A;  3SWQ A;  4E7F A;  3ROI A;  4R7U A;  4GFP A;  3SWA A;  2O15 A;  4ZND A;  2O0E A;  3TI2 A;  1RF6 A;  3FJX A;  2Z2C A;  2GGA A;  4FQD A;  2GG4 A;  1NAW A;  1P88 A;  3VCY A;  1RF4 A;  1EJC A;  3LTH A;  4E7B A;  3SWD A;  2O0D A;  4N3P A;  3KQJ A;  3UPK A;  2O0X A;  2PQB A;  4E7E A;  2PQC A;  3KR6 A;  3SWI A;  1EJD A;  3RMT A;  5BUF A;  3ZH3 A;  3SWG A;  1G6T A;  1MI4 A;  3SPB A;  1EYN A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...