4ZNDA

2.55 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii in complex with shikimate-3-phosphate, phosphate, and potassium
Total Genus 148
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
148
sequence length
436
structure length
436
Chain Sequence
AMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQKDKQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title 2.55 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in complex with shikimate-3-phosphate, phosphate, and potassium
rcsb
molecule tags Transferase
source organism Coxiella burnetii (strain rsa 493 / nine mile phase i)
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
total genus 148
structure length 436
sequence length 436
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2015-05-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4zndA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4zndA01
2PQDA 4FQDA 3KQAA 4E7GA 4EGRA 2PQBA 3TR1A 2Z2CA 4E7EA 3V4TA 1Q3GA 4E7DA 5BUFA 3SWGA 1P88A 3SWDA 1A2NA 2QFSA 4ZNDA 1Q36A 3SWQA 1YBGA 2O0XA 2O0BA 5BS5A 2GG4A 2GGDA 1EYNA 5U4HA 1G6SA 3SPBA 3R38A 3KQJA 3TI2A 1EJDA 2AA9A 1P89A 1NAWA 1DLGA 4E7CA 1X8TA 2O0EA 2PQCA 4EIIA 2O0DA 2O15A 4R7UA 2AAYA 2YVWA 3RMTA 2PQ9A 3SLHA 4GFPA 3LTHA 1G6TA 1RYWA 1RF5A 1EJCA 3SWIA 2QFQA 1RF6A 3FK1A 1RF4A 3SG1A 3FK0A 4E7BA 2BJBA 2RL1A 3FJZA 3SWEA 2GGAA 3KR6A 3ZH4A 1UAEA 3ROIA 4E7FA 3NVSA 2GG6A 2O0ZA 3UPKA 2QFUA 3SU9A 1X8RA 3SWAA 4N3PA 3ZH3A 5BQ2A 1MI4A 3VCYA 2QFTA 3ISSA 3FJXA 2RL2A 3V5VA
chains in the Genus database with same CATH superfamily
2PQDA 4FQDA 3KQAA 4E7GA 4EGRA 2PQBA 3TR1A 2Z2CA 4CLQA 4E7EA 3V4TA 1Q3GA 4E7DA 5BUFA 3SWGA 1P88A 3KGDA 3SWDA 1A2NA 2QFSA 4ZNDA 1Q36A 3SWQA 1YBGA 2O0XA 2O0BA 5BS5A 2GG4A 2GGDA 1EYNA 5U4HA 1G6SA 3SPBA 3R38A 3KQJA 3TI2A 1EJDA 3TUTA 2AA9A 1P89A 1NAWA 1DLGA 4E7CA 1X8TA 2O0EA 2PQCA 4EIIA 2O0DA 2O15A 4R7UA 2AAYA 3TW3A 2YVWA 3RMTA 2PQ9A 3SLHA 4GFPA 3LTHA 1G6TA 1RYWA 1RF5A 1EJCA 3SWIA 2QFQA 1RF6A 3FK1A 1RF4A 3SG1A 3FK0A 4E7BA 2BJBA 2RL1A 3FJZA 3SWEA 2GGAA 3KR6A 3ZH4A 1UAEA 3ROIA 4E7FA 3NVSA 1QMIA 4O89A 2GG6A 2O0ZA 3UPKA 2QFUA 3SU9A 3PQVA 1X8RA 1QMHA 3SWAA 3TUXA 4N3PA 3ZH3A 5BQ2A 1MI4A 3VCYA 2QFTA 3ISSA 3FJXA 4O8JA 2RL2A 3TV1A 3V5VA
chains in the Genus database with same CATH topology
2PQDA 4FQDA 3KQAA 4E7GA 4EGRA 2PQBA 3TR1A 2Z2CA 4E7EA 3V4TA 1Q3GA 4E7DA 5BUFA 3SWGA 1P88A 3SWDA 1A2NA 2QFSA 4ZNDA 1Q36A 3SWQA 1YBGA 2O0XA 2O0BA 5BS5A 2GG4A 2GGDA 1EYNA 5U4HA 1G6SA 3SPBA 3R38A 3KQJA 3TI2A 1EJDA 2AA9A 1P89A 1NAWA 1DLGA 4E7CA 1X8TA 2O0EA 2PQCA 4EIIA 2O0DA 2O15A 4R7UA 2AAYA 2YVWA 3RMTA 2PQ9A 3SLHA 4GFPA 3LTHA 1G6TA 1RYWA 1RF5A 1EJCA 3SWIA 2QFQA 1RF6A 3FK1A 1RF4A 3SG1A 3FK0A 4E7BA 2BJBA 2RL1A 3FJZA 3SWEA 2GGAA 3KR6A 3ZH4A 1UAEA 3ROIA 4E7FA 3NVSA 2GG6A 2O0ZA 3UPKA 2QFUA 3SU9A 1X8RA 3SWAA 4N3PA 3ZH3A 5BQ2A 1MI4A 3VCYA 2QFTA 3ISSA 3FJXA 2RL2A 3V5VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PQD A;  4FQD A;  3KQA A;  4E7G A;  4EGR A;  2PQB A;  3TR1 A;  2Z2C A;  4E7E A;  3V4T A;  1Q3G A;  4E7D A;  5BUF A;  3SWG A;  1P88 A;  3SWD A;  1A2N A;  2QFS A;  4ZND A;  1Q36 A;  3SWQ A;  1YBG A;  2O0X A;  2O0B A;  5BS5 A;  2GG4 A;  2GGD A;  1EYN A;  5U4H A;  1G6S A;  3SPB A;  3R38 A;  3KQJ A;  3TI2 A;  1EJD A;  2AA9 A;  1P89 A;  1NAW A;  1DLG A;  4E7C A;  1X8T A;  2O0E A;  2PQC A;  4EII A;  2O0D A;  2O15 A;  4R7U A;  2AAY A;  2YVW A;  3RMT A;  2PQ9 A;  3SLH A;  4GFP A;  3LTH A;  1G6T A;  1RYW A;  1RF5 A;  1EJC A;  3SWI A;  2QFQ A;  1RF6 A;  3FK1 A;  1RF4 A;  3SG1 A;  3FK0 A;  4E7B A;  2BJB A;  2RL1 A;  3FJZ A;  3SWE A;  2GGA A;  3KR6 A;  3ZH4 A;  1UAE A;  3ROI A;  4E7F A;  3NVS A;  2GG6 A;  2O0Z A;  3UPK A;  2QFU A;  3SU9 A;  1X8R A;  3SWA A;  4N3P A;  3ZH3 A;  5BQ2 A;  1MI4 A;  3VCY A;  2QFT A;  3ISS A;  3FJX A;  2RL2 A;  3V5V A; 
#chains in the Genus database with same CATH topology
 2PQD A;  4FQD A;  3KQA A;  4E7G A;  4EGR A;  2PQB A;  3TR1 A;  2Z2C A;  4CLQ A;  4E7E A;  3V4T A;  1Q3G A;  4E7D A;  5BUF A;  3SWG A;  1P88 A;  3KGD A;  3SWD A;  1A2N A;  2QFS A;  4ZND A;  1Q36 A;  3SWQ A;  1YBG A;  2O0X A;  2O0B A;  5BS5 A;  2GG4 A;  2GGD A;  1EYN A;  5U4H A;  1G6S A;  3SPB A;  3R38 A;  3KQJ A;  3TI2 A;  1EJD A;  3TUT A;  2AA9 A;  1P89 A;  1NAW A;  1DLG A;  4E7C A;  1X8T A;  2O0E A;  2PQC A;  4EII A;  2O0D A;  2O15 A;  4R7U A;  2AAY A;  3TW3 A;  2YVW A;  3RMT A;  2PQ9 A;  3SLH A;  4GFP A;  3LTH A;  1G6T A;  1RYW A;  1RF5 A;  1EJC A;  3SWI A;  2QFQ A;  1RF6 A;  3FK1 A;  1RF4 A;  3SG1 A;  3FK0 A;  4E7B A;  2BJB A;  2RL1 A;  3FJZ A;  3SWE A;  2GGA A;  3KR6 A;  3ZH4 A;  1UAE A;  3ROI A;  4E7F A;  3NVS A;  1QMI A;  4O89 A;  2GG6 A;  2O0Z A;  3UPK A;  2QFU A;  3SU9 A;  3PQV A;  1X8R A;  1QMH A;  3SWA A;  3TUX A;  4N3P A;  3ZH3 A;  5BQ2 A;  1MI4 A;  3VCY A;  2QFT A;  3ISS A;  3FJX A;  4O8J A;  2RL2 A;  3TV1 A;  3V5V A; 
#chains in the Genus database with same CATH homology
 2PQD A;  4FQD A;  3KQA A;  4E7G A;  4EGR A;  2PQB A;  3TR1 A;  2Z2C A;  4E7E A;  3V4T A;  1Q3G A;  4E7D A;  5BUF A;  3SWG A;  1P88 A;  3SWD A;  1A2N A;  2QFS A;  4ZND A;  1Q36 A;  3SWQ A;  1YBG A;  2O0X A;  2O0B A;  5BS5 A;  2GG4 A;  2GGD A;  1EYN A;  5U4H A;  1G6S A;  3SPB A;  3R38 A;  3KQJ A;  3TI2 A;  1EJD A;  2AA9 A;  1P89 A;  1NAW A;  1DLG A;  4E7C A;  1X8T A;  2O0E A;  2PQC A;  4EII A;  2O0D A;  2O15 A;  4R7U A;  2AAY A;  2YVW A;  3RMT A;  2PQ9 A;  3SLH A;  4GFP A;  3LTH A;  1G6T A;  1RYW A;  1RF5 A;  1EJC A;  3SWI A;  2QFQ A;  1RF6 A;  3FK1 A;  1RF4 A;  3SG1 A;  3FK0 A;  4E7B A;  2BJB A;  2RL1 A;  3FJZ A;  3SWE A;  2GGA A;  3KR6 A;  3ZH4 A;  1UAE A;  3ROI A;  4E7F A;  3NVS A;  2GG6 A;  2O0Z A;  3UPK A;  2QFU A;  3SU9 A;  1X8R A;  3SWA A;  4N3P A;  3ZH3 A;  5BQ2 A;  1MI4 A;  3VCY A;  2QFT A;  3ISS A;  3FJX A;  2RL2 A;  3V5V A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...