3SWEA

Haemophilus influenzae mura in complex with udp-n-acetylmuramic acid and covalent adduct of pep with cys117
Total Genus 142
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
142
sequence length
420
structure length
419
Chain Sequence
MDKFRVYGQSRLSGSVNISGAKNAALPILFAAILATEPVKLTNVPELKDIETTLKILRQLGVVVDRDATGAVLLDASNINHFTAPYELVKTMRASIWALAPLVARFHQGQVSLPGGSIGARPVDLHISGLEKLGADIVLEEGYVKAQVSDRLVGTRIVIEKVSVGATLSIMMAATLAKGTTVIENAAREPEIVDTADFLNKMGAKITGAGSAHITIEGVERLTGCEHSVVPDRIETGTFLIAAAISGGCVVCQNTKADTLDAVIDKLREAGAQVDVTENSITLDMLGNRPKAVNIRTAPHPGFPTDMQAQFTLLNMVAEGTSIITETIFENRFMHIPELIRMGGKAEIEGNTAVCHGVEQLSGTEVIATDLRASISLVLAGCIATGETIVDRIYHIDRGYEHIEDKLRGLGAKIERFSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
pubmed doi rcsb
molecule tags Transferase
source organism Haemophilus influenzae
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
total genus 142
structure length 419
sequence length 420
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2011-07-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3sweA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3sweA01
3KR6A 3ZH4A 4E7GA 4EIIA 2O15A 2PQCA 1EJCA 2PQBA 2O0EA 2RL1A 1EJDA 3SG1A 1P88A 4E7DA 1MI4A 3TI2A 4E7BA 2QFTA 3V4TA 4ZNDA 3SWQA 1NAWA 3SWAA 2YVWA 1G6TA 2O0BA 3SWDA 2O0XA 3KQAA 3VCYA 2Z2CA 3SWGA 3SU9A 1X8TA 2RL2A 4FQDA 1P89A 4E7CA 3FK1A 4GFPA 1DLGA 2PQDA 2AAYA 4R7UA 3ISSA 3LTHA 2GG4A 3TR1A 3V5VA 1RYWA 1YBGA 1A2NA 1RF5A 3SWEA 2QFSA 1UAEA 3FJXA 3KQJA 1X8RA 3FK0A 5BQ2A 5U4HA 2BJBA 2PQ9A 2AA9A 2QFUA 2O0DA 4E7FA 5BUFA 5BS5A 2GG6A 3NVSA 4E7EA 3ZH3A 1Q36A 3UPKA 1EYNA 4N3PA 3SPBA 4EGRA 2O0ZA 3R38A 1G6SA 3FJZA 2QFQA 2GGDA 1RF4A 3SWIA 2GGAA 3RMTA 1Q3GA 3SLHA 1RF6A 3ROIA
chains in the Genus database with same CATH superfamily
3KR6A 3ZH4A 4E7GA 4EIIA 2O15A 2PQCA 1EJCA 2PQBA 2O0EA 2RL1A 1EJDA 3SG1A 1P88A 4E7DA 1QMIA 1MI4A 3TI2A 4E7BA 2QFTA 3V4TA 4ZNDA 3SWQA 1NAWA 3KGDA 3SWAA 2YVWA 1G6TA 2O0BA 3SWDA 2O0XA 3KQAA 3VCYA 2Z2CA 3SWGA 3SU9A 1X8TA 2RL2A 4FQDA 1P89A 4E7CA 3FK1A 4GFPA 1DLGA 2PQDA 2AAYA 4R7UA 3ISSA 3LTHA 2GG4A 3TW3A 3TR1A 3V5VA 1RYWA 1YBGA 1A2NA 1RF5A 3SWEA 2QFSA 1UAEA 3PQVA 3FJXA 3KQJA 1X8RA 3FK0A 4O89A 5BQ2A 4CLQA 5U4HA 2BJBA 2PQ9A 2AA9A 2QFUA 2O0DA 4E7FA 5BUFA 5BS5A 2GG6A 3NVSA 3TUXA 4E7EA 3ZH3A 1Q36A 3UPKA 1QMHA 1EYNA 4N3PA 3SPBA 4EGRA 2O0ZA 3R38A 1G6SA 3FJZA 3TUTA 2QFQA 2GGDA 1RF4A 3SWIA 4O8JA 2GGAA 3RMTA 1Q3GA 3TV1A 3SLHA 1RF6A 3ROIA
chains in the Genus database with same CATH topology
3KR6A 3ZH4A 4E7GA 4EIIA 2O15A 2PQCA 1EJCA 2PQBA 2O0EA 2RL1A 1EJDA 3SG1A 1P88A 4E7DA 1MI4A 3TI2A 4E7BA 2QFTA 3V4TA 4ZNDA 3SWQA 1NAWA 3SWAA 2YVWA 1G6TA 2O0BA 3SWDA 2O0XA 3KQAA 3VCYA 2Z2CA 3SWGA 3SU9A 1X8TA 2RL2A 4FQDA 1P89A 4E7CA 3FK1A 4GFPA 1DLGA 2PQDA 2AAYA 4R7UA 3ISSA 3LTHA 2GG4A 3TR1A 3V5VA 1RYWA 1YBGA 1A2NA 1RF5A 3SWEA 2QFSA 1UAEA 3FJXA 3KQJA 1X8RA 3FK0A 5BQ2A 5U4HA 2BJBA 2PQ9A 2AA9A 2QFUA 2O0DA 4E7FA 5BUFA 5BS5A 2GG6A 3NVSA 4E7EA 3ZH3A 1Q36A 3UPKA 1EYNA 4N3PA 3SPBA 4EGRA 2O0ZA 3R38A 1G6SA 3FJZA 2QFQA 2GGDA 1RF4A 3SWIA 2GGAA 3RMTA 1Q3GA 3SLHA 1RF6A 3ROIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KR6 A;  3ZH4 A;  4E7G A;  4EII A;  2O15 A;  2PQC A;  1EJC A;  2PQB A;  2O0E A;  2RL1 A;  1EJD A;  3SG1 A;  1P88 A;  4E7D A;  1MI4 A;  3TI2 A;  4E7B A;  2QFT A;  3V4T A;  4ZND A;  3SWQ A;  1NAW A;  3SWA A;  2YVW A;  1G6T A;  2O0B A;  3SWD A;  2O0X A;  3KQA A;  3VCY A;  2Z2C A;  3SWG A;  3SU9 A;  1X8T A;  2RL2 A;  4FQD A;  1P89 A;  4E7C A;  3FK1 A;  4GFP A;  1DLG A;  2PQD A;  2AAY A;  4R7U A;  3ISS A;  3LTH A;  2GG4 A;  3TR1 A;  3V5V A;  1RYW A;  1YBG A;  1A2N A;  1RF5 A;  3SWE A;  2QFS A;  1UAE A;  3FJX A;  3KQJ A;  1X8R A;  3FK0 A;  5BQ2 A;  5U4H A;  2BJB A;  2PQ9 A;  2AA9 A;  2QFU A;  2O0D A;  4E7F A;  5BUF A;  5BS5 A;  2GG6 A;  3NVS A;  4E7E A;  3ZH3 A;  1Q36 A;  3UPK A;  1EYN A;  4N3P A;  3SPB A;  4EGR A;  2O0Z A;  3R38 A;  1G6S A;  3FJZ A;  2QFQ A;  2GGD A;  1RF4 A;  3SWI A;  2GGA A;  3RMT A;  1Q3G A;  3SLH A;  1RF6 A;  3ROI A; 
#chains in the Genus database with same CATH topology
 3KR6 A;  3ZH4 A;  4E7G A;  4EII A;  2O15 A;  2PQC A;  1EJC A;  2PQB A;  2O0E A;  2RL1 A;  1EJD A;  3SG1 A;  1P88 A;  4E7D A;  1QMI A;  1MI4 A;  3TI2 A;  4E7B A;  2QFT A;  3V4T A;  4ZND A;  3SWQ A;  1NAW A;  3KGD A;  3SWA A;  2YVW A;  1G6T A;  2O0B A;  3SWD A;  2O0X A;  3KQA A;  3VCY A;  2Z2C A;  3SWG A;  3SU9 A;  1X8T A;  2RL2 A;  4FQD A;  1P89 A;  4E7C A;  3FK1 A;  4GFP A;  1DLG A;  2PQD A;  2AAY A;  4R7U A;  3ISS A;  3LTH A;  2GG4 A;  3TW3 A;  3TR1 A;  3V5V A;  1RYW A;  1YBG A;  1A2N A;  1RF5 A;  3SWE A;  2QFS A;  1UAE A;  3PQV A;  3FJX A;  3KQJ A;  1X8R A;  3FK0 A;  4O89 A;  5BQ2 A;  4CLQ A;  5U4H A;  2BJB A;  2PQ9 A;  2AA9 A;  2QFU A;  2O0D A;  4E7F A;  5BUF A;  5BS5 A;  2GG6 A;  3NVS A;  3TUX A;  4E7E A;  3ZH3 A;  1Q36 A;  3UPK A;  1QMH A;  1EYN A;  4N3P A;  3SPB A;  4EGR A;  2O0Z A;  3R38 A;  1G6S A;  3FJZ A;  3TUT A;  2QFQ A;  2GGD A;  1RF4 A;  3SWI A;  4O8J A;  2GGA A;  3RMT A;  1Q3G A;  3TV1 A;  3SLH A;  1RF6 A;  3ROI A; 
#chains in the Genus database with same CATH homology
 3KR6 A;  3ZH4 A;  4E7G A;  4EII A;  2O15 A;  2PQC A;  1EJC A;  2PQB A;  2O0E A;  2RL1 A;  1EJD A;  3SG1 A;  1P88 A;  4E7D A;  1MI4 A;  3TI2 A;  4E7B A;  2QFT A;  3V4T A;  4ZND A;  3SWQ A;  1NAW A;  3SWA A;  2YVW A;  1G6T A;  2O0B A;  3SWD A;  2O0X A;  3KQA A;  3VCY A;  2Z2C A;  3SWG A;  3SU9 A;  1X8T A;  2RL2 A;  4FQD A;  1P89 A;  4E7C A;  3FK1 A;  4GFP A;  1DLG A;  2PQD A;  2AAY A;  4R7U A;  3ISS A;  3LTH A;  2GG4 A;  3TR1 A;  3V5V A;  1RYW A;  1YBG A;  1A2N A;  1RF5 A;  3SWE A;  2QFS A;  1UAE A;  3FJX A;  3KQJ A;  1X8R A;  3FK0 A;  5BQ2 A;  5U4H A;  2BJB A;  2PQ9 A;  2AA9 A;  2QFU A;  2O0D A;  4E7F A;  5BUF A;  5BS5 A;  2GG6 A;  3NVS A;  4E7E A;  3ZH3 A;  1Q36 A;  3UPK A;  1EYN A;  4N3P A;  3SPB A;  4EGR A;  2O0Z A;  3R38 A;  1G6S A;  3FJZ A;  2QFQ A;  2GGD A;  1RF4 A;  3SWI A;  2GGA A;  3RMT A;  1Q3G A;  3SLH A;  1RF6 A;  3ROI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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