3ZH4A

Crystal structure of s. pneumoniae hungary 19a mura1 in complex with citrate
Total Genus 131
50100150200250300350400020406080100120
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
418
structure length
411
Chain Sequence
MRKIVINGGLPLQGEITISGAKNSVVALIPAIILADDVVTLDCVPDISDVASLVEIMELMGATVKRYDDVLEIDPRGVQNIPMPINSLRASYYFYGSLLGRFGEATVGLDLGPRPIDLHLKAFEAMGATASYEGDNMKLSAKDTGLHGASIYMDTVSVGATINTMIAAVKANGRTIIENAAREPEIIDVATLLNNMGAHIRGAGTNIIIIDGVERLHGTRHQVIPDRIEAGTYISLAAAVGKGIRINNVLYEHLEGFIAKLEEMGVRMTVSEDSIFVEEQSNLKAINIKTAPYPGFATDLQQPLTPLLLRANGRGTIVDTIYEKRVNHVFELAKMDADISTTNGHILYTGGRDLRGTSVKATDLRAGAALVIAGLMAEGKTEITNIEFILRGYSDIIEKLRNLGADIRLVE
50100150200250300350400400300200100
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH13 (403-410)S2 (12-17)EMPTYAH1 (22-33)S13 (226-229)3H1 (92-98)AH3 (99-105)S12 (215-218)O1 (45-47)AH12 (393-398)S5 (70-74)TI1 (75-78)TI2 (88-91)S6 (107-111)AH4 (122-133)S8 (143-148)TIV2 (139-142)TII'2 (149-152)S10 (181-185)TVIII1 (160-163)AH5 (165-176)TVIII2 (212-215)TIV4 (184-187)AH6 (191-203)AH7 (234-247)TIV7 (300-303)AH9 (308-317)3H2 (258-260)S14 (248-254)AH8 (262-271)S16 (281-284)TI3 (278-281)S15 (275-278)S19 (346-349)S17 (295-297)TVIa1 (299-302)TIV8 (326-329)S18 (320-326)TI4 (329-332)S21 (365-367)AH11 (371-383)S22 (387-391)TIV12 (390-393)S3 (39-42)TII'1 (67-70)TIV1 (41-44)AH2 (48-60)TII1 (209-212)TIV6 (253-256)3H3 (305-307)TIV10 (348-351)AH10 (334-342)S20 (352-357)S1 (3-7)S11 (206-208)TIV13 (400-403)S4 (63-67)S9 (157-159)Updating...
connected with : NaN
molecule tags Transferase
source organism Streptococcus pneumoniae
publication title Heteroresistance to Fosfomycin is Predominant in Streptococcus Pneumoniae and Depends on Mura1 Gene.
pubmed doi rcsb
molecule keywords UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE
total genus 131
structure length 411
sequence length 418
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2012-12-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3zh4A02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3zh4A01
1Q36A 2PQBA 3NVSA 4R7UA 1G6SA 2YVWA 4N3PA 3TR1A 3FK1A 3SWQA 2GGAA 5BUFA 1P89A 1EJCA 3SG1A 3ZH4A 2QFSA 1UAEA 1X8RA 2BJBA 2GG4A 2O0ZA 5U4HA 1EYNA 1NAWA 4FQDA 3V4TA 3UPKA 3FJZA 3FJXA 3SWAA 1YBGA 3ZH3A 1P88A 2O0BA 2RL1A 1G6TA 3TI2A 4E7FA 3SWIA 1RF5A 4E7DA 2O0DA 2Z2CA 3VCYA 2O0EA 3R38A 2PQCA 2O0XA 1DLGA 4E7BA 3SPBA 3SWEA 2QFTA 2AA9A 2GGDA 1X8TA 2PQ9A 2PQDA 3SWGA 1MI4A 1EJDA 3KR6A 4E7GA 2QFQA 2GG6A 1RYWA 3FK0A 3RMTA 3ISSA 3V5VA 1RF4A 3KQJA 3SLHA 4EGRA 4ZNDA 4EIIA 3LTHA 1Q3GA 5BS5A 5BQ2A 4E7EA 1RF6A 4GFPA 2AAYA 3SU9A 2O15A 1A2NA 3KQAA 2RL2A 3SWDA 4E7CA 2QFUA 3ROIA
chains in the Genus database with same CATH superfamily
1Q36A 2PQBA 3KGDA 3NVSA 4R7UA 1G6SA 2YVWA 4N3PA 3TR1A 3FK1A 3SWQA 2GGAA 5BUFA 1P89A 1EJCA 3SG1A 3ZH4A 4O89A 2QFSA 1UAEA 1X8RA 2BJBA 2GG4A 2O0ZA 5U4HA 1EYNA 1NAWA 4FQDA 3V4TA 4O8JA 3UPKA 3FJZA 3FJXA 3SWAA 1YBGA 3ZH3A 1P88A 2O0BA 2RL1A 1G6TA 3TI2A 4E7FA 3SWIA 1RF5A 4E7DA 2O0DA 2Z2CA 3VCYA 2O0EA 3R38A 2PQCA 2O0XA 1DLGA 4E7BA 3PQVA 3SPBA 3SWEA 2QFTA 2AA9A 2GGDA 1X8TA 2PQ9A 1QMHA 2PQDA 3TW3A 1MI4A 3SWGA 1EJDA 1QMIA 3KR6A 4CLQA 4E7GA 2QFQA 2GG6A 1RYWA 3FK0A 3TV1A 3RMTA 3ISSA 3V5VA 1RF4A 3KQJA 3SLHA 4EGRA 3TUXA 4ZNDA 4EIIA 3LTHA 1Q3GA 5BS5A 5BQ2A 4E7EA 1RF6A 4GFPA 2AAYA 3SU9A 3TUTA 2O15A 1A2NA 3KQAA 2RL2A 3SWDA 4E7CA 2QFUA 3ROIA
chains in the Genus database with same CATH topology
1Q36A 2PQBA 3NVSA 4R7UA 1G6SA 2YVWA 4N3PA 3TR1A 3FK1A 3SWQA 2GGAA 5BUFA 1P89A 1EJCA 3SG1A 3ZH4A 2QFSA 1UAEA 1X8RA 2BJBA 2GG4A 2O0ZA 5U4HA 1EYNA 1NAWA 4FQDA 3V4TA 3UPKA 3FJZA 3FJXA 3SWAA 1YBGA 3ZH3A 1P88A 2O0BA 2RL1A 1G6TA 3TI2A 4E7FA 3SWIA 1RF5A 4E7DA 2O0DA 2Z2CA 3VCYA 2O0EA 3R38A 2PQCA 2O0XA 1DLGA 4E7BA 3SPBA 3SWEA 2QFTA 2AA9A 2GGDA 1X8TA 2PQ9A 2PQDA 3SWGA 1MI4A 1EJDA 3KR6A 4E7GA 2QFQA 2GG6A 1RYWA 3FK0A 3RMTA 3ISSA 3V5VA 1RF4A 3KQJA 3SLHA 4EGRA 4ZNDA 4EIIA 3LTHA 1Q3GA 5BS5A 5BQ2A 4E7EA 1RF6A 4GFPA 2AAYA 3SU9A 2O15A 1A2NA 3KQAA 2RL2A 3SWDA 4E7CA 2QFUA 3ROIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Q36 A;  2PQB A;  3NVS A;  4R7U A;  1G6S A;  2YVW A;  4N3P A;  3TR1 A;  3FK1 A;  3SWQ A;  2GGA A;  5BUF A;  1P89 A;  1EJC A;  3SG1 A;  3ZH4 A;  2QFS A;  1UAE A;  1X8R A;  2BJB A;  2GG4 A;  2O0Z A;  5U4H A;  1EYN A;  1NAW A;  4FQD A;  3V4T A;  3UPK A;  3FJZ A;  3FJX A;  3SWA A;  1YBG A;  3ZH3 A;  1P88 A;  2O0B A;  2RL1 A;  1G6T A;  3TI2 A;  4E7F A;  3SWI A;  1RF5 A;  4E7D A;  2O0D A;  2Z2C A;  3VCY A;  2O0E A;  3R38 A;  2PQC A;  2O0X A;  1DLG A;  4E7B A;  3SPB A;  3SWE A;  2QFT A;  2AA9 A;  2GGD A;  1X8T A;  2PQ9 A;  2PQD A;  3SWG A;  1MI4 A;  1EJD A;  3KR6 A;  4E7G A;  2QFQ A;  2GG6 A;  1RYW A;  3FK0 A;  3RMT A;  3ISS A;  3V5V A;  1RF4 A;  3KQJ A;  3SLH A;  4EGR A;  4ZND A;  4EII A;  3LTH A;  1Q3G A;  5BS5 A;  5BQ2 A;  4E7E A;  1RF6 A;  4GFP A;  2AAY A;  3SU9 A;  2O15 A;  1A2N A;  3KQA A;  2RL2 A;  3SWD A;  4E7C A;  2QFU A;  3ROI A; 
#chains in the Genus database with same CATH topology
 1Q36 A;  2PQB A;  3KGD A;  3NVS A;  4R7U A;  1G6S A;  2YVW A;  4N3P A;  3TR1 A;  3FK1 A;  3SWQ A;  2GGA A;  5BUF A;  1P89 A;  1EJC A;  3SG1 A;  3ZH4 A;  4O89 A;  2QFS A;  1UAE A;  1X8R A;  2BJB A;  2GG4 A;  2O0Z A;  5U4H A;  1EYN A;  1NAW A;  4FQD A;  3V4T A;  4O8J A;  3UPK A;  3FJZ A;  3FJX A;  3SWA A;  1YBG A;  3ZH3 A;  1P88 A;  2O0B A;  2RL1 A;  1G6T A;  3TI2 A;  4E7F A;  3SWI A;  1RF5 A;  4E7D A;  2O0D A;  2Z2C A;  3VCY A;  2O0E A;  3R38 A;  2PQC A;  2O0X A;  1DLG A;  4E7B A;  3PQV A;  3SPB A;  3SWE A;  2QFT A;  2AA9 A;  2GGD A;  1X8T A;  2PQ9 A;  1QMH A;  2PQD A;  3TW3 A;  1MI4 A;  3SWG A;  1EJD A;  1QMI A;  3KR6 A;  4CLQ A;  4E7G A;  2QFQ A;  2GG6 A;  1RYW A;  3FK0 A;  3TV1 A;  3RMT A;  3ISS A;  3V5V A;  1RF4 A;  3KQJ A;  3SLH A;  4EGR A;  3TUX A;  4ZND A;  4EII A;  3LTH A;  1Q3G A;  5BS5 A;  5BQ2 A;  4E7E A;  1RF6 A;  4GFP A;  2AAY A;  3SU9 A;  3TUT A;  2O15 A;  1A2N A;  3KQA A;  2RL2 A;  3SWD A;  4E7C A;  2QFU A;  3ROI A; 
#chains in the Genus database with same CATH homology
 1Q36 A;  2PQB A;  3NVS A;  4R7U A;  1G6S A;  2YVW A;  4N3P A;  3TR1 A;  3FK1 A;  3SWQ A;  2GGA A;  5BUF A;  1P89 A;  1EJC A;  3SG1 A;  3ZH4 A;  2QFS A;  1UAE A;  1X8R A;  2BJB A;  2GG4 A;  2O0Z A;  5U4H A;  1EYN A;  1NAW A;  4FQD A;  3V4T A;  3UPK A;  3FJZ A;  3FJX A;  3SWA A;  1YBG A;  3ZH3 A;  1P88 A;  2O0B A;  2RL1 A;  1G6T A;  3TI2 A;  4E7F A;  3SWI A;  1RF5 A;  4E7D A;  2O0D A;  2Z2C A;  3VCY A;  2O0E A;  3R38 A;  2PQC A;  2O0X A;  1DLG A;  4E7B A;  3SPB A;  3SWE A;  2QFT A;  2AA9 A;  2GGD A;  1X8T A;  2PQ9 A;  2PQD A;  3SWG A;  1MI4 A;  1EJD A;  3KR6 A;  4E7G A;  2QFQ A;  2GG6 A;  1RYW A;  3FK0 A;  3RMT A;  3ISS A;  3V5V A;  1RF4 A;  3KQJ A;  3SLH A;  4EGR A;  4ZND A;  4EII A;  3LTH A;  1Q3G A;  5BS5 A;  5BQ2 A;  4E7E A;  1RF6 A;  4GFP A;  2AAY A;  3SU9 A;  2O15 A;  1A2N A;  3KQA A;  2RL2 A;  3SWD A;  4E7C A;  2QFU A;  3ROI A; 
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