4U98A

Structure of mycobacterial maltokinase, the missing link in the essential glge-pathway (appcp complex)
Total Genus 141
50100150200250300350400020406080100120140
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
451
structure length
451
Chain Sequence
TLAFGDWIVHRRWYAGRSRELVSAEPAVVTPLRDDLDHILLDVTYTDGTVERYQLVVRWADSPVAGFGEAATIGTALGPQGERIAYDALFDPDAARHLLRLVDASATVADLRFTREPGATLPLYAPPKVSSAEQSNTSVIFGKDAMLKVFRRVTPGINPDIELNRVLAQAGNRHVARLLGSFETSWAGPGTDRCALGMVTAFAANSAEGWDMATASAREMFADVVGSDFADESYRLGNAVASVHATLAEALGTSTEPFPVDTVLARLQSAARSAPELAGRAAAVEERYRRLDGRAITVQRVHGDLHLGQVLRTPDDWLLIDFEGEPGQPLDERRRPDSPLRDVAGVLRSFEYAAYQKLVELAPEQDADGRLADRARNWVDRNSAAFCAGYAAVAGDDPRRDGDVLAAYELDKAVYEAAYEARFRPSWLPIPMRSIDRILGKLAAALEHHHH
50100150200250300350400400300200100
020406080100120140Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYO1 (3-5)AH1 (5-10)3H1 (70-72)TI1 (12-15)TII'1 (17-20)S3 (51-61)TI2 (34-37)TI3 (46-49)S11 (153-154)S12 (179-186)S13 (194-202)3H2 (89-91)S5 (82-88)TIV1 (61-64)TI4 (65-68)S4 (73-79)TI5 (79-82)S10 (146-151)S7 (112-116)S6 (108-109)TII'2 (109-112)S9 (137-142)TI6 (123-126)S8 (128-130)TII'3 (142-145)AH3 (160-171)S16 (296-300)AH8 (331-335)TIV3 (173-176)TI9 (314-317)TII2 (189-192)TIV4 (186-189)S17 (311-314)TII3 (204-207)S14 (208-209)TI7 (307-310)AH4 (210-218)AH10 (371-395)AH9 (340-361)TI11 (367-370)TII4 (220-223)AH5 (228-252)S15 (254-258)O2 (259-261)TII5 (292-295)AH11 (403-424)AH6 (261-274)3H3 (276-278)TI12 (398-401)S18 (317-320)TIV5 (303-306)TI10 (326-329)3H4 (364-366)TIV6 (399-402)AH12 (429-448)3H5 (426-428)S2 (37-46)AH2 (93-105)TII1 (117-120)AH7 (279-291)S1 (22-34)Updating...
connected with : NaN
molecule tags Transferase
source organism Mycobacterium vanbaalenii
publication title Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway.
pubmed doi rcsb
molecule keywords Maltokinase
total genus 141
structure length 451
sequence length 451
ec nomenclature ec 2.7.1.175: Maltokinase.
pdb deposition date 2014-08-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01636 APH Phosphotransferase enzyme family
A PF18085 Mak_N_cap Maltokinase N-terminal cap domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 4u98A02
1L8TA 3HAVA 4DA5A 2PU8A 2PPQA 4FEUA 3TM0A 3SGCA 4EJ7A 5EQYA 2CKOA 3SG8A 1J7LA 5IQFA 4DTBA 3W0NA 3HAMA 2PYWA 2I7QA 2B0QA 1NW1A 4R7BA 3UZRA 1ND4A 4ORKA 4U98A 4DE4A 4PDYA 3W0PA 4DCAA 2IG7A 3N4UA 3F2RA 4CGAA 5IQCA 3DXPA 3N4TA 4DT8A 3ATSA 4BR3A 3FEGA 3LQ3A 5EQPA 5IQDA 2PULA 3MESA 3CSVA 2PUNA 5AFVA 2PUPA 4CG9A 5IQIA 2QG7A 3TDVA 4O7PA 4DFUA 5IQBA 3W0QA 5IQEA 2Q83A 3W0RA 2CKPA 5EQEA 3TDWA 3ATTA 4WZYA 3TYKA 4R78A 4R77A 4DTAA 4DBXA 3N4VA 4FEVA 2OLCA 4DT9A 3JR1A 4N57A 3ZM9A 5C4KA 3FI8A 2BKKA 5C4LA 3C5IA 5BYLA 4H05A 4U94A 5FTGA 4DFBA 1J7UA 2CKQA 3Q2JA 5IQHA 3W0MA 3G15A 3DXQA 5FUTA 3W0SA 2PUIA 4GKHA 3SG9A 1J7IA 4FEWA 5IQGA 4O7OA 3W0OA 4CG8A 4FEXA 5IQAA 4GKIA
chains in the Genus database with same CATH superfamily
1L8TA 3HAVA 4DA5A 2PU8A 2PPQA 4FEUA 3TM0A 3SGCA 4EJ7A 5EQYA 2CKOA 3SG8A 1J7LA 5IQFA 4DTBA 3W0NA 3HAMA 2PYWA 2I7QA 2B0QA 1NW1A 4R7BA 3UZRA 1ND4A 4ORKA 4U98A 4DE4A 4PDYA 3W0PA 4DCAA 2IG7A 3N4UA 3F2RA 4CGAA 5IQCA 3DXPA 3N4TA 4DT8A 3ATSA 4BR3A 3FEGA 3LQ3A 5EQPA 5IQDA 2PULA 3MESA 3CSVA 2PUNA 5AFVA 2PUPA 4CG9A 5IQIA 2QG7A 3TDVA 4O7PA 4DFUA 5IQBA 3W0QA 5IQEA 2Q83A 3W0RA 2CKPA 5EQEA 3TDWA 3ATTA 4WZYA 3TYKA 4R78A 4R77A 4DTAA 4DBXA 3N4VA 4FEVA 2OLCA 4DT9A 3JR1A 4N57A 3ZM9A 5C4KA 3FI8A 2BKKA 5C4LA 3C5IA 5BYLA 4H05A 4U94A 5FTGA 4DFBA 1J7UA 2CKQA 3Q2JA 5IQHA 3W0MA 3G15A 3DXQA 5FUTA 3W0SA 2PUIA 4GKHA 3SG9A 1J7IA 4FEWA 5IQGA 4O7OA 3W0OA 4CG8A 4FEXA 5IQAA 4GKIA
chains in the Genus database with same CATH topology
1L8TA 3HAVA 4DA5A 2PU8A 2PPQA 4FEUA 3TM0A 3SGCA 4EJ7A 5EQYA 2CKOA 3SG8A 1J7LA 5IQFA 4DTBA 3W0NA 3HAMA 2PYWA 2I7QA 2B0QA 1NW1A 4R7BA 3UZRA 1ND4A 4ORKA 4U98A 4DE4A 4PDYA 3W0PA 4DCAA 2IG7A 3N4UA 3F2RA 4CGAA 5IQCA 3DXPA 3N4TA 4DT8A 3ATSA 4BR3A 3FEGA 3LQ3A 5EQPA 5IQDA 2PULA 3MESA 3CSVA 2PUNA 5AFVA 2PUPA 4CG9A 5IQIA 2QG7A 3TDVA 4O7PA 4DFUA 5IQBA 3W0QA 5IQEA 2Q83A 3W0RA 2CKPA 5EQEA 3TDWA 3ATTA 4WZYA 3TYKA 4R78A 4R77A 4DTAA 4DBXA 3N4VA 4FEVA 2OLCA 4DT9A 3JR1A 4N57A 3ZM9A 5C4KA 3FI8A 2BKKA 5C4LA 3C5IA 5BYLA 4H05A 4U94A 5FTGA 4DFBA 1J7UA 2CKQA 3Q2JA 5IQHA 3W0MA 3G15A 3DXQA 5FUTA 3W0SA 2PUIA 4GKHA 3SG9A 1J7IA 4FEWA 5IQGA 4O7OA 3W0OA 4CG8A 4FEXA 5IQAA 4GKIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1L8T A;  3HAV A;  4DA5 A;  2PU8 A;  2PPQ A;  4FEU A;  3TM0 A;  3SGC A;  4EJ7 A;  5EQY A;  2CKO A;  3SG8 A;  1J7L A;  5IQF A;  4DTB A;  3W0N A;  3HAM A;  2PYW A;  2I7Q A;  2B0Q A;  1NW1 A;  4R7B A;  3UZR A;  1ND4 A;  4ORK A;  4U98 A;  4DE4 A;  4PDY A;  3W0P A;  4DCA A;  2IG7 A;  3N4U A;  3F2R A;  4CGA A;  5IQC A;  3DXP A;  3N4T A;  4DT8 A;  3ATS A;  4BR3 A;  3FEG A;  3LQ3 A;  5EQP A;  5IQD A;  2PUL A;  3MES A;  3CSV A;  2PUN A;  5AFV A;  2PUP A;  4CG9 A;  5IQI A;  2QG7 A;  3TDV A;  4O7P A;  4DFU A;  5IQB A;  3W0Q A;  5IQE A;  2Q83 A;  3W0R A;  2CKP A;  5EQE A;  3TDW A;  3ATT A;  4WZY A;  3TYK A;  4R78 A;  4R77 A;  4DTA A;  4DBX A;  3N4V A;  4FEV A;  2OLC A;  4DT9 A;  3JR1 A;  4N57 A;  3ZM9 A;  5C4K A;  3FI8 A;  2BKK A;  5C4L A;  3C5I A;  5BYL A;  4H05 A;  4U94 A;  5FTG A;  4DFB A;  1J7U A;  2CKQ A;  3Q2J A;  5IQH A;  3W0M A;  3G15 A;  3DXQ A;  5FUT A;  3W0S A;  2PUI A;  4GKH A;  3SG9 A;  1J7I A;  4FEW A;  5IQG A;  4O7O A;  3W0O A;  4CG8 A;  4FEX A;  5IQA A;  4GKI A; 
#chains in the Genus database with same CATH topology
 1L8T A;  3HAV A;  4DA5 A;  2PU8 A;  2PPQ A;  4FEU A;  3TM0 A;  3SGC A;  4EJ7 A;  5EQY A;  2CKO A;  3SG8 A;  1J7L A;  5IQF A;  4DTB A;  3W0N A;  3HAM A;  2PYW A;  2I7Q A;  2B0Q A;  1NW1 A;  4R7B A;  3UZR A;  1ND4 A;  4ORK A;  4U98 A;  4DE4 A;  4PDY A;  3W0P A;  4DCA A;  2IG7 A;  3N4U A;  3F2R A;  4CGA A;  5IQC A;  3DXP A;  3N4T A;  4DT8 A;  3ATS A;  4BR3 A;  3FEG A;  3LQ3 A;  5EQP A;  5IQD A;  2PUL A;  3MES A;  3CSV A;  2PUN A;  5AFV A;  2PUP A;  4CG9 A;  5IQI A;  2QG7 A;  3TDV A;  4O7P A;  4DFU A;  5IQB A;  3W0Q A;  5IQE A;  2Q83 A;  3W0R A;  2CKP A;  5EQE A;  3TDW A;  3ATT A;  4WZY A;  3TYK A;  4R78 A;  4R77 A;  4DTA A;  4DBX A;  3N4V A;  4FEV A;  2OLC A;  4DT9 A;  3JR1 A;  4N57 A;  3ZM9 A;  5C4K A;  3FI8 A;  2BKK A;  5C4L A;  3C5I A;  5BYL A;  4H05 A;  4U94 A;  5FTG A;  4DFB A;  1J7U A;  2CKQ A;  3Q2J A;  5IQH A;  3W0M A;  3G15 A;  3DXQ A;  5FUT A;  3W0S A;  2PUI A;  4GKH A;  3SG9 A;  1J7I A;  4FEW A;  5IQG A;  4O7O A;  3W0O A;  4CG8 A;  4FEX A;  5IQA A;  4GKI A; 
#chains in the Genus database with same CATH homology
 1L8T A;  3HAV A;  4DA5 A;  2PU8 A;  2PPQ A;  4FEU A;  3TM0 A;  3SGC A;  4EJ7 A;  5EQY A;  2CKO A;  3SG8 A;  1J7L A;  5IQF A;  4DTB A;  3W0N A;  3HAM A;  2PYW A;  2I7Q A;  2B0Q A;  1NW1 A;  4R7B A;  3UZR A;  1ND4 A;  4ORK A;  4U98 A;  4DE4 A;  4PDY A;  3W0P A;  4DCA A;  2IG7 A;  3N4U A;  3F2R A;  4CGA A;  5IQC A;  3DXP A;  3N4T A;  4DT8 A;  3ATS A;  4BR3 A;  3FEG A;  3LQ3 A;  5EQP A;  5IQD A;  2PUL A;  3MES A;  3CSV A;  2PUN A;  5AFV A;  2PUP A;  4CG9 A;  5IQI A;  2QG7 A;  3TDV A;  4O7P A;  4DFU A;  5IQB A;  3W0Q A;  5IQE A;  2Q83 A;  3W0R A;  2CKP A;  5EQE A;  3TDW A;  3ATT A;  4WZY A;  3TYK A;  4R78 A;  4R77 A;  4DTA A;  4DBX A;  3N4V A;  4FEV A;  2OLC A;  4DT9 A;  3JR1 A;  4N57 A;  3ZM9 A;  5C4K A;  3FI8 A;  2BKK A;  5C4L A;  3C5I A;  5BYL A;  4H05 A;  4U94 A;  5FTG A;  4DFB A;  1J7U A;  2CKQ A;  3Q2J A;  5IQH A;  3W0M A;  3G15 A;  3DXQ A;  5FUT A;  3W0S A;  2PUI A;  4GKH A;  3SG9 A;  1J7I A;  4FEW A;  5IQG A;  4O7O A;  3W0O A;  4CG8 A;  4FEX A;  5IQA A;  4GKI A; 
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