1TQ1A

Solution structure of at5g66040, a putative protein from arabidosis thaliana
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
119
structure length
119
Chain Sequence
AEESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords senescence-associated family protein
publication title Solution structure of a single-domain thiosulfate sulfurtransferase from Arabidopsis thaliana.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 20
structure length 119
sequence length 119
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2004-06-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1tq1A00
3ILMA 2FSXA 1YT8A 4WH9A 2IFDA 1YMLA 1BOHA 1T3KA 2ORAA 2WLXA 3HZUA 2EG4B 2DCQA 2GWFA 3P3AA 1OKGA 1E0CA 3AAXA 5HBPA 3NHVA 1H4MX 3AAYA 3MZZA 2J6PA 3O3WA 3FNJA 1CWRA 3ICRA 5LAOA 1YM9A 5LAMA 3HWIA 5HBOA 2EG3A 1VEEA 2VSWA 3IPOA 3ICSA 4WH7A 3UTNX 4F67A 1UARA 1C25A 2A2KA 2JTSA 2JTQA 3I3UA 1GMXA 3GK5A 1HZMA 2UZQA 3HIXA 1QXNA 1CWSA 1DP2A 2MRMA 3FLHA 2K0ZA 3OP3A 3FS5A 1WV9A 1YS0A 1ORBA 3ICTA 4JGTA 3I2VA 3NTAA 1BOIA 1URHA 2WLRA 1WHBA 1YMKA 2MOIA 1RHSA 3TG1B 3NT6A 2HHGA 1RHDA 3TP9A 3D1PA 3IWHA 3TG3A 2EG4A 2MOLA 3R2UA 2IFVA 2JTRA 2KL3A 1TQ1A 3IPPA 3G5JA 1YMDA 4OCGA 2OUCA 5HBQA 1QB0A 3F4AA 3FOJA 3NTDA 3K9RA 1CWTA 3OLHA 5HPAA 1GN0A 5HBLA 1H4KX
chains in the Genus database with same CATH superfamily
3ILMA 2FSXA 1YT8A 4WH9A 2IFDA 1YMLA 1BOHA 1T3KA 2ORAA 2WLXA 3HZUA 2EG4B 2DCQA 2GWFA 3P3AA 1OKGA 1E0CA 3AAXA 5HBPA 3NHVA 1H4MX 3AAYA 3MZZA 2J6PA 3O3WA 3FNJA 1CWRA 3ICRA 5LAOA 1YM9A 5LAMA 3HWIA 5HBOA 2EG3A 1VEEA 2VSWA 3IPOA 3ICSA 4WH7A 3UTNX 4F67A 1UARA 1C25A 2A2KA 2JTSA 2JTQA 3I3UA 1GMXA 3GK5A 1HZMA 2UZQA 3HIXA 1QXNA 1CWSA 1DP2A 2MRMA 3FLHA 2K0ZA 3OP3A 3FS5A 1WV9A 1YS0A 1ORBA 3ICTA 4JGTA 3I2VA 3NTAA 1BOIA 1URHA 2WLRA 1WHBA 1YMKA 2MOIA 1RHSA 3TG1B 3NT6A 2HHGA 1RHDA 3TP9A 3D1PA 3IWHA 3TG3A 2EG4A 2MOLA 3R2UA 2IFVA 2JTRA 2KL3A 1TQ1A 3IPPA 3G5JA 1YMDA 4OCGA 2OUCA 5HBQA 1QB0A 3F4AA 3FOJA 3NTDA 3K9RA 1CWTA 3OLHA 5HPAA 1GN0A 5HBLA 2Q82A 1H4KX
chains in the Genus database with same CATH topology
3ILMA 2FSXA 1YT8A 4WH9A 2IFDA 1YMLA 1BOHA 1T3KA 2ORAA 2WLXA 3HZUA 2EG4B 2DCQA 2GWFA 3P3AA 1OKGA 1E0CA 3AAXA 5HBPA 3NHVA 1H4MX 3AAYA 3MZZA 2J6PA 3O3WA 3FNJA 1CWRA 3ICRA 5LAOA 1YM9A 5LAMA 3HWIA 5HBOA 2EG3A 1VEEA 2VSWA 3IPOA 3ICSA 4WH7A 3UTNX 4F67A 1UARA 1C25A 2A2KA 2JTSA 2JTQA 3I3UA 1GMXA 3GK5A 1HZMA 2UZQA 3HIXA 1QXNA 1CWSA 1DP2A 2MRMA 3FLHA 2K0ZA 3OP3A 3FS5A 1WV9A 1YS0A 1ORBA 3ICTA 4JGTA 3I2VA 3NTAA 1BOIA 1URHA 2WLRA 1WHBA 1YMKA 2MOIA 1RHSA 3TG1B 3NT6A 2HHGA 1RHDA 3TP9A 3D1PA 3IWHA 3TG3A 2EG4A 2MOLA 3R2UA 2IFVA 2JTRA 2KL3A 1TQ1A 3IPPA 3G5JA 1YMDA 4OCGA 2OUCA 5HBQA 1QB0A 3F4AA 3FOJA 3NTDA 3K9RA 1CWTA 3OLHA 5HPAA 1GN0A 5HBLA 1H4KX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ILM A;  2FSX A;  1YT8 A;  4WH9 A;  2IFD A;  1YML A;  1BOH A;  1T3K A;  2ORA A;  2WLX A;  3HZU A;  2EG4 B;  2DCQ A;  2GWF A;  3P3A A;  1OKG A;  1E0C A;  3AAX A;  5HBP A;  3NHV A;  1H4M X;  3AAY A;  3MZZ A;  2J6P A;  3O3W A;  3FNJ A;  1CWR A;  3ICR A;  5LAO A;  1YM9 A;  5LAM A;  3HWI A;  5HBO A;  2EG3 A;  1VEE A;  2VSW A;  3IPO A;  3ICS A;  4WH7 A;  3UTN X;  4F67 A;  1UAR A;  1C25 A;  2A2K A;  2JTS A;  2JTQ A;  3I3U A;  1GMX A;  3GK5 A;  1HZM A;  2UZQ A;  3HIX A;  1QXN A;  1CWS A;  1DP2 A;  2MRM A;  3FLH A;  2K0Z A;  3OP3 A;  3FS5 A;  1WV9 A;  1YS0 A;  1ORB A;  3ICT A;  4JGT A;  3I2V A;  3NTA A;  1BOI A;  1URH A;  2WLR A;  1WHB A;  1YMK A;  2MOI A;  1RHS A;  3TG1 B;  3NT6 A;  2HHG A;  1RHD A;  3TP9 A;  3D1P A;  3IWH A;  3TG3 A;  2EG4 A;  2MOL A;  3R2U A;  2IFV A;  2JTR A;  2KL3 A;  1TQ1 A;  3IPP A;  3G5J A;  1YMD A;  4OCG A;  2OUC A;  5HBQ A;  1QB0 A;  3F4A A;  3FOJ A;  3NTD A;  3K9R A;  1CWT A;  3OLH A;  5HPA A;  1GN0 A;  5HBL A;  1H4K X; 
#chains in the Genus database with same CATH topology
 3ILM A;  2FSX A;  1YT8 A;  4WH9 A;  2IFD A;  1YML A;  1BOH A;  1T3K A;  2ORA A;  2WLX A;  3HZU A;  2EG4 B;  2DCQ A;  2GWF A;  3P3A A;  1OKG A;  1E0C A;  3AAX A;  5HBP A;  3NHV A;  1H4M X;  3AAY A;  3MZZ A;  2J6P A;  3O3W A;  3FNJ A;  1CWR A;  3ICR A;  5LAO A;  1YM9 A;  5LAM A;  3HWI A;  5HBO A;  2EG3 A;  1VEE A;  2VSW A;  3IPO A;  3ICS A;  4WH7 A;  3UTN X;  4F67 A;  1UAR A;  1C25 A;  2A2K A;  2JTS A;  2JTQ A;  3I3U A;  1GMX A;  3GK5 A;  1HZM A;  2UZQ A;  3HIX A;  1QXN A;  1CWS A;  1DP2 A;  2MRM A;  3FLH A;  2K0Z A;  3OP3 A;  3FS5 A;  1WV9 A;  1YS0 A;  1ORB A;  3ICT A;  4JGT A;  3I2V A;  3NTA A;  1BOI A;  1URH A;  2WLR A;  1WHB A;  1YMK A;  2MOI A;  1RHS A;  3TG1 B;  3NT6 A;  2HHG A;  1RHD A;  3TP9 A;  3D1P A;  3IWH A;  3TG3 A;  2EG4 A;  2MOL A;  3R2U A;  2IFV A;  2JTR A;  2KL3 A;  1TQ1 A;  3IPP A;  3G5J A;  1YMD A;  4OCG A;  2OUC A;  5HBQ A;  1QB0 A;  3F4A A;  3FOJ A;  3NTD A;  3K9R A;  1CWT A;  3OLH A;  5HPA A;  1GN0 A;  5HBL A;  2Q82 A;  1H4K X; 
#chains in the Genus database with same CATH homology
 3ILM A;  2FSX A;  1YT8 A;  4WH9 A;  2IFD A;  1YML A;  1BOH A;  1T3K A;  2ORA A;  2WLX A;  3HZU A;  2EG4 B;  2DCQ A;  2GWF A;  3P3A A;  1OKG A;  1E0C A;  3AAX A;  5HBP A;  3NHV A;  1H4M X;  3AAY A;  3MZZ A;  2J6P A;  3O3W A;  3FNJ A;  1CWR A;  3ICR A;  5LAO A;  1YM9 A;  5LAM A;  3HWI A;  5HBO A;  2EG3 A;  1VEE A;  2VSW A;  3IPO A;  3ICS A;  4WH7 A;  3UTN X;  4F67 A;  1UAR A;  1C25 A;  2A2K A;  2JTS A;  2JTQ A;  3I3U A;  1GMX A;  3GK5 A;  1HZM A;  2UZQ A;  3HIX A;  1QXN A;  1CWS A;  1DP2 A;  2MRM A;  3FLH A;  2K0Z A;  3OP3 A;  3FS5 A;  1WV9 A;  1YS0 A;  1ORB A;  3ICT A;  4JGT A;  3I2V A;  3NTA A;  1BOI A;  1URH A;  2WLR A;  1WHB A;  1YMK A;  2MOI A;  1RHS A;  3TG1 B;  3NT6 A;  2HHG A;  1RHD A;  3TP9 A;  3D1P A;  3IWH A;  3TG3 A;  2EG4 A;  2MOL A;  3R2U A;  2IFV A;  2JTR A;  2KL3 A;  1TQ1 A;  3IPP A;  3G5J A;  1YMD A;  4OCG A;  2OUC A;  5HBQ A;  1QB0 A;  3F4A A;  3FOJ A;  3NTD A;  3K9R A;  1CWT A;  3OLH A;  5HPA A;  1GN0 A;  5HBL A;  1H4K X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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