3HZUA

Crystal structure of probable thiosulfate sulfurtransferase ssea (rhodanese) from mycobacterium tuberculosis
Total Genus 99
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
99
sequence length
292
structure length
292
Chain Sequence
LPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Thiosulfate sulfurtransferase sseA
publication title Mycobacterium thermoresistibile as a source of thermostable orthologs of Mycobacterium tuberculosis proteins.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 99
structure length 292
sequence length 292
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2009-06-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3hzuA02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3hzuA01
2MOLA 2JTQA 2EG3A 2FSXA 1YMLA 3ICSA 5LAMA 5HBOA 1CWTA 1BOIA 1RHDA 3TG1B 3NT6A 3FLHA 1T3KA 2K0ZA 2OUCA 1YT8A 1E0CA 5HPAA 1H4KX 1YMDA 3FNJA 1H4MX 2EG4B 2HHGA 4JGTA 3AAXA 1QB0A 1DP2A 1GN0A 3TP9A 1URHA 2JTSA 3IPOA 1C25A 3NHVA 2ORAA 3P3AA 1RHSA 3ICRA 3I3UA 3G5JA 3TG3A 2A2KA 2DCQA 1CWRA 4WH7A 1OKGA 2KL3A 3D1PA 3UTNX 2WLRA 4F67A 2UZQA 3OP3A 2EG4A 3FS5A 1WHBA 1TQ1A 1UARA 3FOJA 5HBPA 2VSWA 2MRMA 2WLXA 1WV9A 3IWHA 5HBLA 1CWSA 2GWFA 5HBQA 3ILMA 4WH9A 3HZUA 5LAOA 1HZMA 3AAYA 3MZZA 1BOHA 1YM9A 3I2VA 1YS0A 3O3WA 3NTDA 3R2UA 1QXNA 3GK5A 3ICTA 2IFDA 1ORBA 1YMKA 1GMXA 3K9RA 2MOIA 3OLHA 2IFVA 3NTAA 1VEEA 2JTRA 2J6PA 3IPPA 3HWIA 4OCGA 3F4AA 3HIXA
chains in the Genus database with same CATH superfamily
2MOLA 2JTQA 2EG3A 2FSXA 1YMLA 3ICSA 5LAMA 5HBOA 1CWTA 1BOIA 1RHDA 3TG1B 3NT6A 3FLHA 1T3KA 2K0ZA 2OUCA 1YT8A 1E0CA 5HPAA 1H4KX 1YMDA 3FNJA 1H4MX 2EG4B 2HHGA 4JGTA 3AAXA 1QB0A 1DP2A 1GN0A 3TP9A 1URHA 2JTSA 3IPOA 1C25A 3NHVA 2ORAA 3P3AA 1RHSA 3ICRA 3I3UA 3G5JA 3TG3A 2A2KA 2DCQA 1CWRA 4WH7A 1OKGA 2KL3A 3D1PA 3UTNX 2WLRA 4F67A 2UZQA 3OP3A 2EG4A 3FS5A 1WHBA 1TQ1A 1UARA 3FOJA 5HBPA 2VSWA 2MRMA 2WLXA 1WV9A 3IWHA 5HBLA 1CWSA 2GWFA 5HBQA 3ILMA 2Q82A 4WH9A 3HZUA 5LAOA 1HZMA 3AAYA 3MZZA 1BOHA 1YM9A 3I2VA 1YS0A 3O3WA 3NTDA 3R2UA 1QXNA 3GK5A 3ICTA 2IFDA 1ORBA 1YMKA 1GMXA 3K9RA 2MOIA 3OLHA 2IFVA 3NTAA 1VEEA 2JTRA 2J6PA 3IPPA 3HWIA 4OCGA 3F4AA 3HIXA
chains in the Genus database with same CATH topology
2MOLA 2JTQA 2EG3A 2FSXA 1YMLA 3ICSA 5LAMA 5HBOA 1CWTA 1BOIA 1RHDA 3TG1B 3NT6A 3FLHA 1T3KA 2K0ZA 2OUCA 1YT8A 1E0CA 5HPAA 1H4KX 1YMDA 3FNJA 1H4MX 2EG4B 2HHGA 4JGTA 3AAXA 1QB0A 1DP2A 1GN0A 3TP9A 1URHA 2JTSA 3IPOA 1C25A 3NHVA 2ORAA 3P3AA 1RHSA 3ICRA 3I3UA 3G5JA 3TG3A 2A2KA 2DCQA 1CWRA 4WH7A 1OKGA 2KL3A 3D1PA 3UTNX 2WLRA 4F67A 2UZQA 3OP3A 2EG4A 3FS5A 1WHBA 1TQ1A 1UARA 3FOJA 5HBPA 2VSWA 2MRMA 2WLXA 1WV9A 3IWHA 5HBLA 1CWSA 2GWFA 5HBQA 3ILMA 4WH9A 3HZUA 5LAOA 1HZMA 3AAYA 3MZZA 1BOHA 1YM9A 3I2VA 1YS0A 3O3WA 3NTDA 3R2UA 1QXNA 3GK5A 3ICTA 2IFDA 1ORBA 1YMKA 1GMXA 3K9RA 2MOIA 3OLHA 2IFVA 3NTAA 1VEEA 2JTRA 2J6PA 3IPPA 3HWIA 4OCGA 3F4AA 3HIXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MOL A;  2JTQ A;  2EG3 A;  2FSX A;  1YML A;  3ICS A;  5LAM A;  5HBO A;  1CWT A;  1BOI A;  1RHD A;  3TG1 B;  3NT6 A;  3FLH A;  1T3K A;  2K0Z A;  2OUC A;  1YT8 A;  1E0C A;  5HPA A;  1H4K X;  1YMD A;  3FNJ A;  1H4M X;  2EG4 B;  2HHG A;  4JGT A;  3AAX A;  1QB0 A;  1DP2 A;  1GN0 A;  3TP9 A;  1URH A;  2JTS A;  3IPO A;  1C25 A;  3NHV A;  2ORA A;  3P3A A;  1RHS A;  3ICR A;  3I3U A;  3G5J A;  3TG3 A;  2A2K A;  2DCQ A;  1CWR A;  4WH7 A;  1OKG A;  2KL3 A;  3D1P A;  3UTN X;  2WLR A;  4F67 A;  2UZQ A;  3OP3 A;  2EG4 A;  3FS5 A;  1WHB A;  1TQ1 A;  1UAR A;  3FOJ A;  5HBP A;  2VSW A;  2MRM A;  2WLX A;  1WV9 A;  3IWH A;  5HBL A;  1CWS A;  2GWF A;  5HBQ A;  3ILM A;  4WH9 A;  3HZU A;  5LAO A;  1HZM A;  3AAY A;  3MZZ A;  1BOH A;  1YM9 A;  3I2V A;  1YS0 A;  3O3W A;  3NTD A;  3R2U A;  1QXN A;  3GK5 A;  3ICT A;  2IFD A;  1ORB A;  1YMK A;  1GMX A;  3K9R A;  2MOI A;  3OLH A;  2IFV A;  3NTA A;  1VEE A;  2JTR A;  2J6P A;  3IPP A;  3HWI A;  4OCG A;  3F4A A;  3HIX A; 
#chains in the Genus database with same CATH topology
 2MOL A;  2JTQ A;  2EG3 A;  2FSX A;  1YML A;  3ICS A;  5LAM A;  5HBO A;  1CWT A;  1BOI A;  1RHD A;  3TG1 B;  3NT6 A;  3FLH A;  1T3K A;  2K0Z A;  2OUC A;  1YT8 A;  1E0C A;  5HPA A;  1H4K X;  1YMD A;  3FNJ A;  1H4M X;  2EG4 B;  2HHG A;  4JGT A;  3AAX A;  1QB0 A;  1DP2 A;  1GN0 A;  3TP9 A;  1URH A;  2JTS A;  3IPO A;  1C25 A;  3NHV A;  2ORA A;  3P3A A;  1RHS A;  3ICR A;  3I3U A;  3G5J A;  3TG3 A;  2A2K A;  2DCQ A;  1CWR A;  4WH7 A;  1OKG A;  2KL3 A;  3D1P A;  3UTN X;  2WLR A;  4F67 A;  2UZQ A;  3OP3 A;  2EG4 A;  3FS5 A;  1WHB A;  1TQ1 A;  1UAR A;  3FOJ A;  5HBP A;  2VSW A;  2MRM A;  2WLX A;  1WV9 A;  3IWH A;  5HBL A;  1CWS A;  2GWF A;  5HBQ A;  3ILM A;  2Q82 A;  4WH9 A;  3HZU A;  5LAO A;  1HZM A;  3AAY A;  3MZZ A;  1BOH A;  1YM9 A;  3I2V A;  1YS0 A;  3O3W A;  3NTD A;  3R2U A;  1QXN A;  3GK5 A;  3ICT A;  2IFD A;  1ORB A;  1YMK A;  1GMX A;  3K9R A;  2MOI A;  3OLH A;  2IFV A;  3NTA A;  1VEE A;  2JTR A;  2J6P A;  3IPP A;  3HWI A;  4OCG A;  3F4A A;  3HIX A; 
#chains in the Genus database with same CATH homology
 2MOL A;  2JTQ A;  2EG3 A;  2FSX A;  1YML A;  3ICS A;  5LAM A;  5HBO A;  1CWT A;  1BOI A;  1RHD A;  3TG1 B;  3NT6 A;  3FLH A;  1T3K A;  2K0Z A;  2OUC A;  1YT8 A;  1E0C A;  5HPA A;  1H4K X;  1YMD A;  3FNJ A;  1H4M X;  2EG4 B;  2HHG A;  4JGT A;  3AAX A;  1QB0 A;  1DP2 A;  1GN0 A;  3TP9 A;  1URH A;  2JTS A;  3IPO A;  1C25 A;  3NHV A;  2ORA A;  3P3A A;  1RHS A;  3ICR A;  3I3U A;  3G5J A;  3TG3 A;  2A2K A;  2DCQ A;  1CWR A;  4WH7 A;  1OKG A;  2KL3 A;  3D1P A;  3UTN X;  2WLR A;  4F67 A;  2UZQ A;  3OP3 A;  2EG4 A;  3FS5 A;  1WHB A;  1TQ1 A;  1UAR A;  3FOJ A;  5HBP A;  2VSW A;  2MRM A;  2WLX A;  1WV9 A;  3IWH A;  5HBL A;  1CWS A;  2GWF A;  5HBQ A;  3ILM A;  4WH9 A;  3HZU A;  5LAO A;  1HZM A;  3AAY A;  3MZZ A;  1BOH A;  1YM9 A;  3I2V A;  1YS0 A;  3O3W A;  3NTD A;  3R2U A;  1QXN A;  3GK5 A;  3ICT A;  2IFD A;  1ORB A;  1YMK A;  1GMX A;  3K9R A;  2MOI A;  3OLH A;  2IFV A;  3NTA A;  1VEE A;  2JTR A;  2J6P A;  3IPP A;  3HWI A;  4OCG A;  3F4A A;  3HIX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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