2EG4A

Crystal structure of probable thiosulfate sulfurtransferase
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
230
structure length
230
Chain Sequence
MNLPEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLGLGGLEVQLWTEGWEPYATEKEEPKPERTEVVAKLRRDWLLTADEAARHPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLERLGLQPGQEVGVYCHSGARSAVAFFVLRSLGVRARNYLGSMHEWLQEGLPTEP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Probable thiosulfate sulfurtransferase
publication title Crystal Structure of Probable Thiosulfate Sulfurtransferase
rcsb
source organism Thermus thermophilus
total genus 86
structure length 230
sequence length 230
ec nomenclature ec 2.8.1.-:
pdb deposition date 2007-02-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2eg4A01
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2eg4A02
3IPOA 3HZUA 1E0CA 2JTRA 1BOHA 1QB0A 2GWFA 1ORBA 5HBQA 3R2UA 5HPAA 3AAXA 1RHSA 2MOIA 3UTNX 3IPPA 1YMDA 2MRMA 3ICTA 3F4AA 3FNJA 3OLHA 1C25A 3FOJA 3G5JA 1QXNA 1CWTA 2HHGA 1CWSA 3ICSA 2EG4B 3NT6A 5HBOA 3TG3A 2WLRA 3I2VA 3O3WA 3GK5A 1WHBA 2FSXA 1DP2A 5HBPA 3MZZA 3FS5A 1GMXA 1TQ1A 2DCQA 3TG1B 1YT8A 1WV9A 2A2KA 3D1PA 2UZQA 2EG4A 3FLHA 3NTDA 3IWHA 4JGTA 3ILMA 3AAYA 4OCGA 1URHA 2IFVA 5LAOA 3NHVA 1BOIA 1YMLA 3ICRA 2EG3A 1UARA 3TP9A 1HZMA 1VEEA 2KL3A 3I3UA 2WLXA 3HIXA 3NTAA 5LAMA 1CWRA 2VSWA 3P3AA 2JTQA 3HWIA 1H4MX 5HBLA 2K0ZA 1YM9A 4WH9A 1YMKA 2IFDA 1OKGA 3K9RA 1H4KX 1RHDA 2ORAA 1T3KA 2MOLA 3OP3A 1YS0A 2JTSA 4WH7A 4F67A 2OUCA 2J6PA 1GN0A
chains in the Genus database with same CATH superfamily
3IPOA 3HZUA 1E0CA 2JTRA 1BOHA 1QB0A 2GWFA 1ORBA 5HBQA 3R2UA 5HPAA 3AAXA 1RHSA 2MOIA 3UTNX 3IPPA 1YMDA 2MRMA 3ICTA 3F4AA 3FNJA 3OLHA 1C25A 3FOJA 3G5JA 1QXNA 1CWTA 2HHGA 1CWSA 3ICSA 2EG4B 3NT6A 5HBOA 3TG3A 2WLRA 3I2VA 3O3WA 3GK5A 1WHBA 2FSXA 1DP2A 5HBPA 3MZZA 3FS5A 1GMXA 1TQ1A 2DCQA 3TG1B 1YT8A 1WV9A 2A2KA 3D1PA 2UZQA 2EG4A 3FLHA 3NTDA 3IWHA 4JGTA 3ILMA 3AAYA 4OCGA 2Q82A 1URHA 2IFVA 5LAOA 3NHVA 1BOIA 1YMLA 3ICRA 2EG3A 1UARA 3TP9A 1HZMA 1VEEA 2KL3A 3I3UA 2WLXA 3HIXA 3NTAA 5LAMA 1CWRA 2VSWA 3P3AA 2JTQA 3HWIA 1H4MX 5HBLA 2K0ZA 1YM9A 4WH9A 1YMKA 2IFDA 1OKGA 3K9RA 1H4KX 1RHDA 2ORAA 1T3KA 2MOLA 3OP3A 1YS0A 2JTSA 4WH7A 4F67A 2OUCA 2J6PA 1GN0A
chains in the Genus database with same CATH topology
3IPOA 3HZUA 1E0CA 2JTRA 1BOHA 1QB0A 2GWFA 1ORBA 5HBQA 3R2UA 5HPAA 3AAXA 1RHSA 2MOIA 3UTNX 3IPPA 1YMDA 2MRMA 3ICTA 3F4AA 3FNJA 3OLHA 1C25A 3FOJA 3G5JA 1QXNA 1CWTA 2HHGA 1CWSA 3ICSA 2EG4B 3NT6A 5HBOA 3TG3A 2WLRA 3I2VA 3O3WA 3GK5A 1WHBA 2FSXA 1DP2A 5HBPA 3MZZA 3FS5A 1GMXA 1TQ1A 2DCQA 3TG1B 1YT8A 1WV9A 2A2KA 3D1PA 2UZQA 2EG4A 3FLHA 3NTDA 3IWHA 4JGTA 3ILMA 3AAYA 4OCGA 1URHA 2IFVA 5LAOA 3NHVA 1BOIA 1YMLA 3ICRA 2EG3A 1UARA 3TP9A 1HZMA 1VEEA 2KL3A 3I3UA 2WLXA 3HIXA 3NTAA 5LAMA 1CWRA 2VSWA 3P3AA 2JTQA 3HWIA 1H4MX 5HBLA 2K0ZA 1YM9A 4WH9A 1YMKA 2IFDA 1OKGA 3K9RA 1H4KX 1RHDA 2ORAA 1T3KA 2MOLA 3OP3A 1YS0A 2JTSA 4WH7A 4F67A 2OUCA 2J6PA 1GN0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3IPO A;  3HZU A;  1E0C A;  2JTR A;  1BOH A;  1QB0 A;  2GWF A;  1ORB A;  5HBQ A;  3R2U A;  5HPA A;  3AAX A;  1RHS A;  2MOI A;  3UTN X;  3IPP A;  1YMD A;  2MRM A;  3ICT A;  3F4A A;  3FNJ A;  3OLH A;  1C25 A;  3FOJ A;  3G5J A;  1QXN A;  1CWT A;  2HHG A;  1CWS A;  3ICS A;  2EG4 B;  3NT6 A;  5HBO A;  3TG3 A;  2WLR A;  3I2V A;  3O3W A;  3GK5 A;  1WHB A;  2FSX A;  1DP2 A;  5HBP A;  3MZZ A;  3FS5 A;  1GMX A;  1TQ1 A;  2DCQ A;  3TG1 B;  1YT8 A;  1WV9 A;  2A2K A;  3D1P A;  2UZQ A;  2EG4 A;  3FLH A;  3NTD A;  3IWH A;  4JGT A;  3ILM A;  3AAY A;  4OCG A;  1URH A;  2IFV A;  5LAO A;  3NHV A;  1BOI A;  1YML A;  3ICR A;  2EG3 A;  1UAR A;  3TP9 A;  1HZM A;  1VEE A;  2KL3 A;  3I3U A;  2WLX A;  3HIX A;  3NTA A;  5LAM A;  1CWR A;  2VSW A;  3P3A A;  2JTQ A;  3HWI A;  1H4M X;  5HBL A;  2K0Z A;  1YM9 A;  4WH9 A;  1YMK A;  2IFD A;  1OKG A;  3K9R A;  1H4K X;  1RHD A;  2ORA A;  1T3K A;  2MOL A;  3OP3 A;  1YS0 A;  2JTS A;  4WH7 A;  4F67 A;  2OUC A;  2J6P A;  1GN0 A; 
#chains in the Genus database with same CATH topology
 3IPO A;  3HZU A;  1E0C A;  2JTR A;  1BOH A;  1QB0 A;  2GWF A;  1ORB A;  5HBQ A;  3R2U A;  5HPA A;  3AAX A;  1RHS A;  2MOI A;  3UTN X;  3IPP A;  1YMD A;  2MRM A;  3ICT A;  3F4A A;  3FNJ A;  3OLH A;  1C25 A;  3FOJ A;  3G5J A;  1QXN A;  1CWT A;  2HHG A;  1CWS A;  3ICS A;  2EG4 B;  3NT6 A;  5HBO A;  3TG3 A;  2WLR A;  3I2V A;  3O3W A;  3GK5 A;  1WHB A;  2FSX A;  1DP2 A;  5HBP A;  3MZZ A;  3FS5 A;  1GMX A;  1TQ1 A;  2DCQ A;  3TG1 B;  1YT8 A;  1WV9 A;  2A2K A;  3D1P A;  2UZQ A;  2EG4 A;  3FLH A;  3NTD A;  3IWH A;  4JGT A;  3ILM A;  3AAY A;  4OCG A;  2Q82 A;  1URH A;  2IFV A;  5LAO A;  3NHV A;  1BOI A;  1YML A;  3ICR A;  2EG3 A;  1UAR A;  3TP9 A;  1HZM A;  1VEE A;  2KL3 A;  3I3U A;  2WLX A;  3HIX A;  3NTA A;  5LAM A;  1CWR A;  2VSW A;  3P3A A;  2JTQ A;  3HWI A;  1H4M X;  5HBL A;  2K0Z A;  1YM9 A;  4WH9 A;  1YMK A;  2IFD A;  1OKG A;  3K9R A;  1H4K X;  1RHD A;  2ORA A;  1T3K A;  2MOL A;  3OP3 A;  1YS0 A;  2JTS A;  4WH7 A;  4F67 A;  2OUC A;  2J6P A;  1GN0 A; 
#chains in the Genus database with same CATH homology
 3IPO A;  3HZU A;  1E0C A;  2JTR A;  1BOH A;  1QB0 A;  2GWF A;  1ORB A;  5HBQ A;  3R2U A;  5HPA A;  3AAX A;  1RHS A;  2MOI A;  3UTN X;  3IPP A;  1YMD A;  2MRM A;  3ICT A;  3F4A A;  3FNJ A;  3OLH A;  1C25 A;  3FOJ A;  3G5J A;  1QXN A;  1CWT A;  2HHG A;  1CWS A;  3ICS A;  2EG4 B;  3NT6 A;  5HBO A;  3TG3 A;  2WLR A;  3I2V A;  3O3W A;  3GK5 A;  1WHB A;  2FSX A;  1DP2 A;  5HBP A;  3MZZ A;  3FS5 A;  1GMX A;  1TQ1 A;  2DCQ A;  3TG1 B;  1YT8 A;  1WV9 A;  2A2K A;  3D1P A;  2UZQ A;  2EG4 A;  3FLH A;  3NTD A;  3IWH A;  4JGT A;  3ILM A;  3AAY A;  4OCG A;  1URH A;  2IFV A;  5LAO A;  3NHV A;  1BOI A;  1YML A;  3ICR A;  2EG3 A;  1UAR A;  3TP9 A;  1HZM A;  1VEE A;  2KL3 A;  3I3U A;  2WLX A;  3HIX A;  3NTA A;  5LAM A;  1CWR A;  2VSW A;  3P3A A;  2JTQ A;  3HWI A;  1H4M X;  5HBL A;  2K0Z A;  1YM9 A;  4WH9 A;  1YMK A;  2IFD A;  1OKG A;  3K9R A;  1H4K X;  1RHD A;  2ORA A;  1T3K A;  2MOL A;  3OP3 A;  1YS0 A;  2JTS A;  4WH7 A;  4F67 A;  2OUC A;  2J6P A;  1GN0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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