1XTN | Genus

Total Genus 30

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	30
sequence length	111
structure length	111
Chain Sequence	ESCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNSLKKQFPAMALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase
source organism	Mus musculus
publication title	Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX) pubmed doi rcsb
molecule keywords	Serine/threonine-protein kinase Sgk3
total genus	30
structure length	111
sequence length	111
chains with identical sequence	B
ec nomenclature	ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date	2004-10-22

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00787	PX	PX domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1520.10	Alpha Beta	2-Layer Sandwich	PX Domain	Phox-like domain	1xtnA00

1H6HA 2CZOA 3HPCX 1O7KA 2REDA 2WWEA 4PZGA 4OXWA 2I4KA 3HPBA 2ETTA 2V6VA 2YPSA 4P2IA 4P2JA 1XTEA 4PQOA 3FOGA 4IKBB 4IKBA 1KQ6A 4HASA 4AZ9A 1XTNA 4AKVA 2RAKA 1OCUA 1KMDA 4IKDA 1GD5A 2L73A 2RAJA 2V14A 3P0CA 2AR5A 3LUIA 4ON3A 4PQPA 1OCSA 2CSKA 2REAA 2IWLX 3DYTA 3IQ2A 2RAIA 4BGJA 2DYBA
chains in the Genus database with same CATH superfamily

#chains in the Genus database with same CATH superfamily
 1H6H A;  2CZO A;  3HPC X;  1O7K A;  2RED A;  2WWE A;  4PZG A;  4OXW A;  2I4K A;  3HPB A;  2ETT A;  2V6V A;  2YPS A;  4P2I A;  4P2J A;  1XTE A;  4PQO A;  3FOG A;  4IKB B;  4IKB A;  1KQ6 A;  4HAS A;  4AZ9 A;  1XTN A;  4AKV A;  2RAK A;  1OCU A;  1KMD A;  4IKD A;  1GD5 A;  2L73 A;  2RAJ A;  2V14 A;  3P0C A;  2AR5 A;  3LUI A;  4ON3 A;  4PQP A;  1OCS A;  2CSK A;  2REA A;  2IWL X;  3DYT A;  3IQ2 A;  2RAI A;  4BGJ A;  2DYB A; 
#chains in the Genus database with same CATH topology
 1H6H A;  2CZO A;  3HPC X;  1O7K A;  2RED A;  2WWE A;  4PZG A;  4OXW A;  2I4K A;  3HPB A;  2ETT A;  2V6V A;  2YPS A;  4P2I A;  4P2J A;  1XTE A;  4PQO A;  3FOG A;  4IKB B;  4IKB A;  1KQ6 A;  4HAS A;  4AZ9 A;  1XTN A;  4AKV A;  2RAK A;  1OCU A;  1KMD A;  4IKD A;  1GD5 A;  2L73 A;  2RAJ A;  2V14 A;  3P0C A;  2AR5 A;  3LUI A;  4ON3 A;  4PQP A;  1OCS A;  2CSK A;  2REA A;  2IWL X;  3DYT A;  3IQ2 A;  2RAI A;  4BGJ A;  2DYB A; 
#chains in the Genus database with same CATH homology
 1H6H A;  2CZO A;  3HPC X;  1O7K A;  2RED A;  2WWE A;  4PZG A;  4OXW A;  2I4K A;  3HPB A;  2ETT A;  2V6V A;  2YPS A;  4P2I A;  4P2J A;  1XTE A;  4PQO A;  3FOG A;  4IKB B;  4IKB A;  1KQ6 A;  4HAS A;  4AZ9 A;  1XTN A;  4AKV A;  2RAK A;  1OCU A;  1KMD A;  4IKD A;  1GD5 A;  2L73 A;  2RAJ A;  2V14 A;  3P0C A;  2AR5 A;  3LUI A;  4ON3 A;  4PQP A;  1OCS A;  2CSK A;  2REA A;  2IWL X;  3DYT A;  3IQ2 A;  2RAI A;  4BGJ A;  2DYB A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1XTNA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations