2IHC | Genus

Total Genus 33

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	33
sequence length	120
structure length	117
Chain Sequence	SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQELNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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reading 117 atoms

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117 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription
source organism	Homo sapiens
publication title	Crystal structure of the bric-a-brac (BTB) domain of human BACH1 rcsb
molecule keywords	Transcription regulator protein BACH1
total genus	33
structure length	117
sequence length	120
chains with identical sequence	B, C, D
ec nomenclature
pdb deposition date	2006-09-26

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.710.10	Alpha Beta	2-Layer Sandwich	Potassium Channel Kv1.1; Chain A	Potassium Channel Kv1.1; Chain A	2ihcA01

5HYWB 4BKTB 4JGHC 2ASTA 3MKSA 2E31B 2PPIA 1EXBE 2JZ3C 1CS3A 2IZVC 1VCBB 1EOFA 4B9KE 3ZTDB 1FQVB 4I6JC 3C6PA 4B95B 3ZNGB 1S1GA 1HV2A 2MA9C 4W9EB 3OHUA 3OGKA 5BXHA 3HTMA 4W9KB 3I3NA 4W9DB 3B84A 2P1MA 4UIJA 4APFA 4AWJB 4W9JB 4CRHA 3LUTB 3HVEA 5H7HA 2A79B 2Z8HA 5DAFA 2C9WC 2OVQA 1LQBB 4JTAB 4BKSB 3BIMA 4EOZA 4JTDB 4W9IB 2YY9A 3ZRCB 1FS2B 1R28A 3M8VA 5H7GA 1BUOA 3C6NA 4UYIA 4CXJA 2P1OA 3M4TA 2I2RA 4W9GB 3ZKJB 3WSOB 3ZTCB 4AJYC 4CXIA 4ZOUA 2FNJC 1DSXA 1QDWA 1R2BA 3M52A 5BXBA 5LLIB 2OVPA 1FS1B 2VPKA 3HVEB 4W9HH 4W9LB 2OVRA 3GA1A 3OGMA 1P22B 3LBZA 2IHCA 3M5BA 4U77A 4W9FB 4W9CB 3C6OA 1LDKD 3HU6A 5BXDA 5A6RA 2E32B 3FKCA 4WQOC 3LNMB 1R29A 3L2OA 3ZUNB 1QDVA 5BO4C 3ZRFB 1NN7A 5A15A 1A68A 4N9F5 3DRZA 3HQIA 4U2MA 4BGCA 3KVTA 2ASSA 4CXTA 1EOEA 4W9HB 3V7DA 2VKPA 2P1QA 5JH5B 1T1DA 1EODA 3OGLA 4JTCB 4U2NA 3E4UA 4HXIA 5HZGC 3DCGB 2IF5A 2R9RB 2NZ0B 2Q81A 1NEXA 5FTAA 2P1NA 5EUPA 4B9KB 3OHVA 4J8ZA 5DADA 5IBKA 4CP3A 2P1PA 1LM8C 2NN2A 4AP2A
chains in the Genus database with same CATH superfamily

5HYWB 4BKTB 4JGHC 2ASTA 3MKSA 2E31B 2PPIA 1EXBE 2JZ3C 1CS3A 2IZVC 1VCBB 1EOFA 4B9KE 3ZTDB 1FQVB 4I6JC 3C6PA 4B95B 3ZNGB 1S1GA 1HV2A 2MA9C 4W9EB 3OHUA 3OGKA 5BXHA 3HTMA 4W9KB 3I3NA 4W9DB 3B84A 2P1MA 4UIJA 4APFA 4AWJB 4W9JB 4CRHA 3LUTB 3HVEA 5H7HA 2A79B 2Z8HA 5DAFA 2C9WC 2OVQA 1LQBB 4JTAB 4BKSB 3BIMA 4EOZA 4JTDB 3DRYA 4W9IB 2YY9A 3ZRCB 1FS2B 1R28A 3M8VA 5H7GA 1BUOA 3DRXA 3C6NA 4UYIA 4CXJA 2P1OA 3M4TA 2I2RA 4W9GB 3ZKJB 3WSOB 3ZTCB 4AJYC 4CXIA 4ZOUA 2FNJC 1DSXA 1QDWA 1R2BA 3M52A 5BXBA 5LLIB 2OVPA 1FS1B 2VPKA 3HVEB 4W9HH 4W9LB 2OVRA 3GA1A 3OGMA 1P22B 3LBZA 2IHCA 3M5BA 4U77A 4W9FB 4W9CB 3C6OA 1LDKD 3HU6A 5BXDA 5A6RA 2E32B 3FKCA 4WQOC 3LNMB 1R29A 3L2OA 3ZUNB 1QDVA 5BO4C 3ZRFB 1NN7A 5A15A 1A68A 4N9F5 3DRZA 3HQIA 4U2MA 4BGCA 3KVTA 2ASSA 4CXTA 1EOEA 4W9HB 3V7DA 2VKPA 2P1QA 4YY8A 1T1DA 5JH5B 1EODA 3OGLA 4JTCB 4U2NA 3E4UA 4HXIA 4ZGCA 3DCGB 5HZGC 2IF5A 2R9RB 2NZ0B 2Q81A 1NEXA 5FTAA 2P1NA 5EUPA 4B9KB 3OHVA 4J8ZA 5DADA 5IBKA 4CP3A 2P1PA 1LM8C 2NN2A 4AP2A
chains in the Genus database with same CATH topology

5HYWB 4BKTB 4JGHC 2ASTA 3MKSA 2E31B 2PPIA 1EXBE 2JZ3C 1CS3A 2IZVC 1VCBB 1EOFA 4B9KE 3ZTDB 1FQVB 4I6JC 3C6PA 4B95B 3ZNGB 1S1GA 1HV2A 2MA9C 4W9EB 3OHUA 3OGKA 5BXHA 3HTMA 4W9KB 3I3NA 4W9DB 3B84A 2P1MA 4UIJA 4APFA 4AWJB 4W9JB 4CRHA 3LUTB 3HVEA 5H7HA 2A79B 2Z8HA 5DAFA 2C9WC 2OVQA 1LQBB 4JTAB 4BKSB 3BIMA 4EOZA 4JTDB 3DRYA 4W9IB 2YY9A 3ZRCB 1FS2B 1R28A 3M8VA 5H7GA 1BUOA 3DRXA 3C6NA 4UYIA 4CXJA 2P1OA 3M4TA 2I2RA 4W9GB 3ZKJB 3WSOB 3ZTCB 4AJYC 4CXIA 4ZOUA 2FNJC 1DSXA 1QDWA 1R2BA 3M52A 5BXBA 5LLIB 2OVPA 1FS1B 2VPKA 3HVEB 4W9HH 4W9LB 2OVRA 3GA1A 3OGMA 1P22B 3LBZA 2IHCA 3M5BA 4U77A 4W9FB 4W9CB 3C6OA 1LDKD 3HU6A 5BXDA 5A6RA 2E32B 3FKCA 4WQOC 3LNMB 1R29A 3L2OA 3ZUNB 1QDVA 5BO4C 3ZRFB 1NN7A 5A15A 1A68A 4N9F5 3DRZA 3HQIA 4U2MA 4BGCA 3KVTA 2ASSA 4CXTA 1EOEA 4W9HB 3V7DA 2VKPA 2P1QA 4YY8A 1T1DA 5JH5B 1EODA 3OGLA 4JTCB 4U2NA 3E4UA 4HXIA 4ZGCA 3DCGB 5HZGC 2IF5A 2R9RB 2NZ0B 2Q81A 1NEXA 5FTAA 2P1NA 5EUPA 4B9KB 3OHVA 4J8ZA 5DADA 5IBKA 4CP3A 2P1PA 1LM8C 2NN2A 4AP2A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 5HYW B;  4BKT B;  4JGH C;  2AST A;  3MKS A;  2E31 B;  2PPI A;  1EXB E;  2JZ3 C;  1CS3 A;  2IZV C;  1VCB B;  1EOF A;  4B9K E;  3ZTD B;  1FQV B;  4I6J C;  3C6P A;  4B95 B;  3ZNG B;  1S1G A;  1HV2 A;  2MA9 C;  4W9E B;  3OHU A;  3OGK A;  5BXH A;  3HTM A;  4W9K B;  3I3N A;  4W9D B;  3B84 A;  2P1M A;  4UIJ A;  4APF A;  4AWJ B;  4W9J B;  4CRH A;  3LUT B;  3HVE A;  5H7H A;  2A79 B;  2Z8H A;  5DAF A;  2C9W C;  2OVQ A;  1LQB B;  4JTA B;  4BKS B;  3BIM A;  4EOZ A;  4JTD B;  4W9I B;  2YY9 A;  3ZRC B;  1FS2 B;  1R28 A;  3M8V A;  5H7G A;  1BUO A;  3C6N A;  4UYI A;  4CXJ A;  2P1O A;  3M4T A;  2I2R A;  4W9G B;  3ZKJ B;  3WSO B;  3ZTC B;  4AJY C;  4CXI A;  4ZOU A;  2FNJ C;  1DSX A;  1QDW A;  1R2B A;  3M52 A;  5BXB A;  5LLI B;  2OVP A;  1FS1 B;  2VPK A;  3HVE B;  4W9H H;  4W9L B;  2OVR A;  3GA1 A;  3OGM A;  1P22 B;  3LBZ A;  2IHC A;  3M5B A;  4U77 A;  4W9F B;  4W9C B;  3C6O A;  1LDK D;  3HU6 A;  5BXD A;  5A6R A;  2E32 B;  3FKC A;  4WQO C;  3LNM B;  1R29 A;  3L2O A;  3ZUN B;  1QDV A;  5BO4 C;  3ZRF B;  1NN7 A;  5A15 A;  1A68 A;  4N9F 5;  3DRZ A;  3HQI A;  4U2M A;  4BGC A;  3KVT A;  2ASS A;  4CXT A;  1EOE A;  4W9H B;  3V7D A;  2VKP A;  2P1Q A;  5JH5 B;  1T1D A;  1EOD A;  3OGL A;  4JTC B;  4U2N A;  3E4U A;  4HXI A;  5HZG C;  3DCG B;  2IF5 A;  2R9R B;  2NZ0 B;  2Q81 A;  1NEX A;  5FTA A;  2P1N A;  5EUP A;  4B9K B;  3OHV A;  4J8Z A;  5DAD A;  5IBK A;  4CP3 A;  2P1P A;  1LM8 C;  2NN2 A;  4AP2 A; 
#chains in the Genus database with same CATH topology
 5HYW B;  4BKT B;  4JGH C;  2AST A;  3MKS A;  2E31 B;  2PPI A;  1EXB E;  2JZ3 C;  1CS3 A;  2IZV C;  1VCB B;  1EOF A;  4B9K E;  3ZTD B;  1FQV B;  4I6J C;  3C6P A;  4B95 B;  3ZNG B;  1S1G A;  1HV2 A;  2MA9 C;  4W9E B;  3OHU A;  3OGK A;  5BXH A;  3HTM A;  4W9K B;  3I3N A;  4W9D B;  3B84 A;  2P1M A;  4UIJ A;  4APF A;  4AWJ B;  4W9J B;  4CRH A;  3LUT B;  3HVE A;  5H7H A;  2A79 B;  2Z8H A;  5DAF A;  2C9W C;  2OVQ A;  1LQB B;  4JTA B;  4BKS B;  3BIM A;  4EOZ A;  4JTD B;  3DRY A;  4W9I B;  2YY9 A;  3ZRC B;  1FS2 B;  1R28 A;  3M8V A;  5H7G A;  1BUO A;  3DRX A;  3C6N A;  4UYI A;  4CXJ A;  2P1O A;  3M4T A;  2I2R A;  4W9G B;  3ZKJ B;  3WSO B;  3ZTC B;  4AJY C;  4CXI A;  4ZOU A;  2FNJ C;  1DSX A;  1QDW A;  1R2B A;  3M52 A;  5BXB A;  5LLI B;  2OVP A;  1FS1 B;  2VPK A;  3HVE B;  4W9H H;  4W9L B;  2OVR A;  3GA1 A;  3OGM A;  1P22 B;  3LBZ A;  2IHC A;  3M5B A;  4U77 A;  4W9F B;  4W9C B;  3C6O A;  1LDK D;  3HU6 A;  5BXD A;  5A6R A;  2E32 B;  3FKC A;  4WQO C;  3LNM B;  1R29 A;  3L2O A;  3ZUN B;  1QDV A;  5BO4 C;  3ZRF B;  1NN7 A;  5A15 A;  1A68 A;  4N9F 5;  3DRZ A;  3HQI A;  4U2M A;  4BGC A;  3KVT A;  2ASS A;  4CXT A;  1EOE A;  4W9H B;  3V7D A;  2VKP A;  2P1Q A;  4YY8 A;  1T1D A;  5JH5 B;  1EOD A;  3OGL A;  4JTC B;  4U2N A;  3E4U A;  4HXI A;  4ZGC A;  3DCG B;  5HZG C;  2IF5 A;  2R9R B;  2NZ0 B;  2Q81 A;  1NEX A;  5FTA A;  2P1N A;  5EUP A;  4B9K B;  3OHV A;  4J8Z A;  5DAD A;  5IBK A;  4CP3 A;  2P1P A;  1LM8 C;  2NN2 A;  4AP2 A; 
#chains in the Genus database with same CATH homology
 5HYW B;  4BKT B;  4JGH C;  2AST A;  3MKS A;  2E31 B;  2PPI A;  1EXB E;  2JZ3 C;  1CS3 A;  2IZV C;  1VCB B;  1EOF A;  4B9K E;  3ZTD B;  1FQV B;  4I6J C;  3C6P A;  4B95 B;  3ZNG B;  1S1G A;  1HV2 A;  2MA9 C;  4W9E B;  3OHU A;  3OGK A;  5BXH A;  3HTM A;  4W9K B;  3I3N A;  4W9D B;  3B84 A;  2P1M A;  4UIJ A;  4APF A;  4AWJ B;  4W9J B;  4CRH A;  3LUT B;  3HVE A;  5H7H A;  2A79 B;  2Z8H A;  5DAF A;  2C9W C;  2OVQ A;  1LQB B;  4JTA B;  4BKS B;  3BIM A;  4EOZ A;  4JTD B;  3DRY A;  4W9I B;  2YY9 A;  3ZRC B;  1FS2 B;  1R28 A;  3M8V A;  5H7G A;  1BUO A;  3DRX A;  3C6N A;  4UYI A;  4CXJ A;  2P1O A;  3M4T A;  2I2R A;  4W9G B;  3ZKJ B;  3WSO B;  3ZTC B;  4AJY C;  4CXI A;  4ZOU A;  2FNJ C;  1DSX A;  1QDW A;  1R2B A;  3M52 A;  5BXB A;  5LLI B;  2OVP A;  1FS1 B;  2VPK A;  3HVE B;  4W9H H;  4W9L B;  2OVR A;  3GA1 A;  3OGM A;  1P22 B;  3LBZ A;  2IHC A;  3M5B A;  4U77 A;  4W9F B;  4W9C B;  3C6O A;  1LDK D;  3HU6 A;  5BXD A;  5A6R A;  2E32 B;  3FKC A;  4WQO C;  3LNM B;  1R29 A;  3L2O A;  3ZUN B;  1QDV A;  5BO4 C;  3ZRF B;  1NN7 A;  5A15 A;  1A68 A;  4N9F 5;  3DRZ A;  3HQI A;  4U2M A;  4BGC A;  3KVT A;  2ASS A;  4CXT A;  1EOE A;  4W9H B;  3V7D A;  2VKP A;  2P1Q A;  4YY8 A;  1T1D A;  5JH5 B;  1EOD A;  3OGL A;  4JTC B;  4U2N A;  3E4U A;  4HXI A;  4ZGC A;  3DCG B;  5HZG C;  2IF5 A;  2R9R B;  2NZ0 B;  2Q81 A;  1NEX A;  5FTA A;  2P1N A;  5EUP A;  4B9K B;  3OHV A;  4J8Z A;  5DAD A;  5IBK A;  4CP3 A;  2P1P A;  1LM8 C;  2NN2 A;  4AP2 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2IHCA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN