2J6PA

Structure of as-sb reductase from leishmania major
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
145
structure length
145
Chain Sequence
NYTYIKPEELVELLDNPDSLVKAAVIDCRDSDRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRPDLMYVKLGPEQKLISEEDLNSAVDH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural characterization of the As/Sb reductase LmACR2 from Leishmania major.
pubmed doi rcsb
molecule tags Oxidoreductase
source organism Leishmania major
molecule keywords SB(V)-AS(V) REDUCTASE
total genus 47
structure length 145
sequence length 145
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2006-10-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2j6pA00
1CWSA 1RHSA 1URHA 1WV9A 3FOJA 3IPOA 3AAXA 4JGTA 1UARA 2VSWA 2JTRA 3OP3A 2K0ZA 2WLRA 3MZZA 3AAYA 2IFDA 5HBLA 1HZMA 3I2VA 1BOIA 2A2KA 3ICTA 2MOLA 1YMLA 1C25A 3IWHA 2KL3A 1YS0A 4OCGA 3FS5A 2MRMA 3GK5A 2EG4B 1YM9A 2WLXA 3HIXA 2DCQA 1QB0A 1DP2A 1BOHA 2EG4A 2JTSA 3NTDA 3NT6A 4F67A 3F4AA 3D1PA 5LAMA 1YMDA 2MOIA 2JTQA 3NHVA 3P3AA 1GN0A 1TQ1A 2J6PA 1H4KX 2EG3A 1YMKA 1T3KA 3ICSA 3R2UA 3HZUA 1CWRA 1YT8A 3OLHA 3ICRA 2IFVA 3HWIA 4WH7A 5LAOA 5HBQA 3G5JA 2FSXA 2OUCA 5HBPA 1RHDA 5HBOA 2UZQA 4WH9A 3FNJA 1H4MX 3K9RA 3IPPA 1WHBA 3FLHA 3I3UA 2GWFA 1CWTA 3TG1B 3ILMA 3O3WA 1ORBA 3TP9A 1VEEA 1E0CA 3TG3A 2HHGA 3UTNX 3NTAA 1GMXA 2ORAA 1OKGA 1QXNA 5HPAA
chains in the Genus database with same CATH superfamily
1CWSA 1RHSA 1URHA 1WV9A 3FOJA 3IPOA 3AAXA 4JGTA 1UARA 2VSWA 2JTRA 3OP3A 2K0ZA 2WLRA 3MZZA 3AAYA 2IFDA 5HBLA 1HZMA 3I2VA 1BOIA 2A2KA 3ICTA 2MOLA 1YMLA 1C25A 3IWHA 2KL3A 1YS0A 4OCGA 3FS5A 2MRMA 3GK5A 2EG4B 1YM9A 2WLXA 3HIXA 2DCQA 1QB0A 1DP2A 1BOHA 2EG4A 2JTSA 3NTDA 3NT6A 4F67A 3F4AA 3D1PA 5LAMA 1YMDA 2MOIA 2JTQA 3NHVA 3P3AA 1GN0A 2Q82A 1TQ1A 2J6PA 1H4KX 2EG3A 1YMKA 1T3KA 3ICSA 3R2UA 3HZUA 1CWRA 1YT8A 3OLHA 3ICRA 2IFVA 3HWIA 4WH7A 5LAOA 5HBQA 3G5JA 2FSXA 2OUCA 5HBPA 1RHDA 5HBOA 2UZQA 4WH9A 3FNJA 1H4MX 3K9RA 3IPPA 1WHBA 3FLHA 3I3UA 2GWFA 1CWTA 3TG1B 3ILMA 3O3WA 1ORBA 3TP9A 1VEEA 1E0CA 3TG3A 2HHGA 3UTNX 3NTAA 1GMXA 2ORAA 1OKGA 1QXNA 5HPAA
chains in the Genus database with same CATH topology
1CWSA 1RHSA 1URHA 1WV9A 3FOJA 3IPOA 3AAXA 4JGTA 1UARA 2VSWA 2JTRA 3OP3A 2K0ZA 2WLRA 3MZZA 3AAYA 2IFDA 5HBLA 1HZMA 3I2VA 1BOIA 2A2KA 3ICTA 2MOLA 1YMLA 1C25A 3IWHA 2KL3A 1YS0A 4OCGA 3FS5A 2MRMA 3GK5A 2EG4B 1YM9A 2WLXA 3HIXA 2DCQA 1QB0A 1DP2A 1BOHA 2EG4A 2JTSA 3NTDA 3NT6A 4F67A 3F4AA 3D1PA 5LAMA 1YMDA 2MOIA 2JTQA 3NHVA 3P3AA 1GN0A 1TQ1A 2J6PA 1H4KX 2EG3A 1YMKA 1T3KA 3ICSA 3R2UA 3HZUA 1CWRA 1YT8A 3OLHA 3ICRA 2IFVA 3HWIA 4WH7A 5LAOA 5HBQA 3G5JA 2FSXA 2OUCA 5HBPA 1RHDA 5HBOA 2UZQA 4WH9A 3FNJA 1H4MX 3K9RA 3IPPA 1WHBA 3FLHA 3I3UA 2GWFA 1CWTA 3TG1B 3ILMA 3O3WA 1ORBA 3TP9A 1VEEA 1E0CA 3TG3A 2HHGA 3UTNX 3NTAA 1GMXA 2ORAA 1OKGA 1QXNA 5HPAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CWS A;  1RHS A;  1URH A;  1WV9 A;  3FOJ A;  3IPO A;  3AAX A;  4JGT A;  1UAR A;  2VSW A;  2JTR A;  3OP3 A;  2K0Z A;  2WLR A;  3MZZ A;  3AAY A;  2IFD A;  5HBL A;  1HZM A;  3I2V A;  1BOI A;  2A2K A;  3ICT A;  2MOL A;  1YML A;  1C25 A;  3IWH A;  2KL3 A;  1YS0 A;  4OCG A;  3FS5 A;  2MRM A;  3GK5 A;  2EG4 B;  1YM9 A;  2WLX A;  3HIX A;  2DCQ A;  1QB0 A;  1DP2 A;  1BOH A;  2EG4 A;  2JTS A;  3NTD A;  3NT6 A;  4F67 A;  3F4A A;  3D1P A;  5LAM A;  1YMD A;  2MOI A;  2JTQ A;  3NHV A;  3P3A A;  1GN0 A;  1TQ1 A;  2J6P A;  1H4K X;  2EG3 A;  1YMK A;  1T3K A;  3ICS A;  3R2U A;  3HZU A;  1CWR A;  1YT8 A;  3OLH A;  3ICR A;  2IFV A;  3HWI A;  4WH7 A;  5LAO A;  5HBQ A;  3G5J A;  2FSX A;  2OUC A;  5HBP A;  1RHD A;  5HBO A;  2UZQ A;  4WH9 A;  3FNJ A;  1H4M X;  3K9R A;  3IPP A;  1WHB A;  3FLH A;  3I3U A;  2GWF A;  1CWT A;  3TG1 B;  3ILM A;  3O3W A;  1ORB A;  3TP9 A;  1VEE A;  1E0C A;  3TG3 A;  2HHG A;  3UTN X;  3NTA A;  1GMX A;  2ORA A;  1OKG A;  1QXN A;  5HPA A; 
#chains in the Genus database with same CATH topology
 1CWS A;  1RHS A;  1URH A;  1WV9 A;  3FOJ A;  3IPO A;  3AAX A;  4JGT A;  1UAR A;  2VSW A;  2JTR A;  3OP3 A;  2K0Z A;  2WLR A;  3MZZ A;  3AAY A;  2IFD A;  5HBL A;  1HZM A;  3I2V A;  1BOI A;  2A2K A;  3ICT A;  2MOL A;  1YML A;  1C25 A;  3IWH A;  2KL3 A;  1YS0 A;  4OCG A;  3FS5 A;  2MRM A;  3GK5 A;  2EG4 B;  1YM9 A;  2WLX A;  3HIX A;  2DCQ A;  1QB0 A;  1DP2 A;  1BOH A;  2EG4 A;  2JTS A;  3NTD A;  3NT6 A;  4F67 A;  3F4A A;  3D1P A;  5LAM A;  1YMD A;  2MOI A;  2JTQ A;  3NHV A;  3P3A A;  1GN0 A;  2Q82 A;  1TQ1 A;  2J6P A;  1H4K X;  2EG3 A;  1YMK A;  1T3K A;  3ICS A;  3R2U A;  3HZU A;  1CWR A;  1YT8 A;  3OLH A;  3ICR A;  2IFV A;  3HWI A;  4WH7 A;  5LAO A;  5HBQ A;  3G5J A;  2FSX A;  2OUC A;  5HBP A;  1RHD A;  5HBO A;  2UZQ A;  4WH9 A;  3FNJ A;  1H4M X;  3K9R A;  3IPP A;  1WHB A;  3FLH A;  3I3U A;  2GWF A;  1CWT A;  3TG1 B;  3ILM A;  3O3W A;  1ORB A;  3TP9 A;  1VEE A;  1E0C A;  3TG3 A;  2HHG A;  3UTN X;  3NTA A;  1GMX A;  2ORA A;  1OKG A;  1QXN A;  5HPA A; 
#chains in the Genus database with same CATH homology
 1CWS A;  1RHS A;  1URH A;  1WV9 A;  3FOJ A;  3IPO A;  3AAX A;  4JGT A;  1UAR A;  2VSW A;  2JTR A;  3OP3 A;  2K0Z A;  2WLR A;  3MZZ A;  3AAY A;  2IFD A;  5HBL A;  1HZM A;  3I2V A;  1BOI A;  2A2K A;  3ICT A;  2MOL A;  1YML A;  1C25 A;  3IWH A;  2KL3 A;  1YS0 A;  4OCG A;  3FS5 A;  2MRM A;  3GK5 A;  2EG4 B;  1YM9 A;  2WLX A;  3HIX A;  2DCQ A;  1QB0 A;  1DP2 A;  1BOH A;  2EG4 A;  2JTS A;  3NTD A;  3NT6 A;  4F67 A;  3F4A A;  3D1P A;  5LAM A;  1YMD A;  2MOI A;  2JTQ A;  3NHV A;  3P3A A;  1GN0 A;  1TQ1 A;  2J6P A;  1H4K X;  2EG3 A;  1YMK A;  1T3K A;  3ICS A;  3R2U A;  3HZU A;  1CWR A;  1YT8 A;  3OLH A;  3ICR A;  2IFV A;  3HWI A;  4WH7 A;  5LAO A;  5HBQ A;  3G5J A;  2FSX A;  2OUC A;  5HBP A;  1RHD A;  5HBO A;  2UZQ A;  4WH9 A;  3FNJ A;  1H4M X;  3K9R A;  3IPP A;  1WHB A;  3FLH A;  3I3U A;  2GWF A;  1CWT A;  3TG1 B;  3ILM A;  3O3W A;  1ORB A;  3TP9 A;  1VEE A;  1E0C A;  3TG3 A;  2HHG A;  3UTN X;  3NTA A;  1GMX A;  2ORA A;  1OKG A;  1QXN A;  5HPA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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