4UIJA

Crystal structure of the btb domain of kctd13
Total Genus 32

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
104
structure length
104
Chain Sequence
SKYVKLNVGGSLHYTTLRTLTGQDTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGEARYYLVQGLIEDCQLALQQKRET

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TI1 (79-82)TIV1 (46-49)S2 (50-55)S3 (77-78)AH1 (56-60)AH3 (92-102)O1 (62-64)EMPTYS4 (84-86)S1 (42-47)Updating...
connected with : NaN
molecule tags Signaling protein
source organism Homo sapiens
publication title Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
pubmed doi rcsb
molecule keywords BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEG
total genus 32
structure length 104
sequence length 104
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2015-03-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 4uijA00
3LBZA 1T1DA 2NZ0B 3OGMA 3MKSA 2Z8HA 3C6OA 3ZNGB 5HYWB 2I2RA 2IZVC 2VKPA 4U2MA 3BIMA 2ASSA 1NEXA 3OGKA 5BXBA 1FS1B 3HTMA 4BGCA 3OHUA 4CXIA 3DCGB 1FQVB 4CRHA 4W9HB 2IF5A 1FS2B 2ASTA 1LQBB 2A79B 5H7GA 4EOZA 3LNMB 2MA9C 2OVPA 4UIJA 3ZTCB 2P1NA 4ZOUA 3OGLA 3V7DA 3M52A 1EXBE 1A68A 2E31B 4W9HH 2JZ3C 1EODA 5BXDA 4W9CB 4W9EB 4B9KB 5IBKA 5LLIB 2OVQA 5BXHA 3M4TA 4APFA 2P1OA 2R9RB 3L2OA 5DADA 1LDKD 4W9LB 4WQOC 5A15A 1QDWA 3M5BA 4BKTB 4W9FB 4U77A 3OHVA 3ZUNB 4AJYC 3M8VA 4JTAB 3FKCA 4W9IB 1CS3A 5JH5B 3C6NA 3HQIA 3HVEB 2VPKA 2YY9A 3ZRFB 3WSOB 4N9F5 1R2BA 2C9WC 3HU6A 1HV2A 2E32B 4J8ZA 3ZRCB 4W9JB 2NN2A 4W9DB 4HXIA 4JGHC 4CXJA 3C6PA 4BKSB 1EOFA 1S1GA 5DAFA 3ZKJB 2Q81A 5FTAA 4W9GB 1R29A 4CP3A 5BO4C 3HVEA 2FNJC 2P1MA 3DRZA 2PPIA 3E4UA 1BUOA 1DSXA 1LM8C 5HZGC 5A6RA 4JTDB 4U2NA 3I3NA 5H7HA 5EUPA 4AP2A 4AWJB 2IHCA 4B95B 4B9KE 1QDVA 2OVRA 3KVTA 3ZTDB 4JTCB 2P1QA 2P1PA 3B84A 1VCBB 1R28A 4W9KB 3GA1A 4CXTA 1EOEA 1NN7A 1P22B 3LUTB 4UYIA 4I6JC
chains in the Genus database with same CATH superfamily
3LBZA 1T1DA 2NZ0B 3OGMA 3MKSA 2Z8HA 3C6OA 3ZNGB 5HYWB 2I2RA 2IZVC 2VKPA 4U2MA 3BIMA 2ASSA 1NEXA 3OGKA 5BXBA 1FS1B 3HTMA 4BGCA 3OHUA 4CXIA 3DCGB 1FQVB 4CRHA 4W9HB 2IF5A 1FS2B 2ASTA 1LQBB 2A79B 5H7GA 4EOZA 3LNMB 2MA9C 2OVPA 4UIJA 3ZTCB 2P1NA 4ZOUA 3OGLA 3V7DA 3M52A 1EXBE 1A68A 2E31B 4W9HH 2JZ3C 1EODA 5BXDA 4W9CB 4W9EB 4B9KB 5IBKA 5LLIB 2OVQA 5BXHA 3M4TA 4APFA 2P1OA 2R9RB 3L2OA 5DADA 1LDKD 4YY8A 4W9LB 4WQOC 5A15A 1QDWA 3M5BA 4BKTB 4W9FB 4U77A 3OHVA 3ZUNB 4AJYC 3M8VA 4JTAB 3FKCA 4W9IB 1CS3A 5JH5B 3C6NA 3HQIA 3DRXA 2VPKA 2YY9A 3HVEB 3ZRFB 3WSOB 4N9F5 1R2BA 2C9WC 3HU6A 1HV2A 2E32B 4J8ZA 3ZRCB 4W9JB 2NN2A 4W9DB 4HXIA 4JGHC 4CXJA 3C6PA 4BKSB 1EOFA 1S1GA 5DAFA 3ZKJB 2Q81A 5FTAA 4W9GB 1R29A 4CP3A 5BO4C 3HVEA 2FNJC 2P1MA 3DRZA 2PPIA 3E4UA 4ZGCA 1BUOA 1DSXA 1LM8C 3DRYA 5HZGC 5A6RA 4JTDB 4U2NA 3I3NA 5H7HA 5EUPA 4AP2A 4AWJB 2IHCA 4B95B 4B9KE 1QDVA 2OVRA 3KVTA 3ZTDB 4JTCB 2P1QA 2P1PA 3B84A 1VCBB 1R28A 4W9KB 3GA1A 4CXTA 1EOEA 1NN7A 1P22B 3LUTB 4UYIA 4I6JC
chains in the Genus database with same CATH topology
3LBZA 1T1DA 2NZ0B 3OGMA 3MKSA 2Z8HA 3C6OA 3ZNGB 5HYWB 2I2RA 2IZVC 2VKPA 4U2MA 3BIMA 2ASSA 1NEXA 3OGKA 5BXBA 1FS1B 3HTMA 4BGCA 3OHUA 4CXIA 3DCGB 1FQVB 4CRHA 4W9HB 2IF5A 1FS2B 2ASTA 1LQBB 2A79B 5H7GA 4EOZA 3LNMB 2MA9C 2OVPA 4UIJA 3ZTCB 2P1NA 4ZOUA 3OGLA 3V7DA 3M52A 1EXBE 1A68A 2E31B 4W9HH 2JZ3C 1EODA 5BXDA 4W9CB 4W9EB 4B9KB 5IBKA 5LLIB 2OVQA 5BXHA 3M4TA 4APFA 2P1OA 2R9RB 3L2OA 5DADA 1LDKD 4YY8A 4W9LB 4WQOC 5A15A 1QDWA 3M5BA 4BKTB 4W9FB 4U77A 3OHVA 3ZUNB 4AJYC 3M8VA 4JTAB 3FKCA 4W9IB 1CS3A 5JH5B 3C6NA 3HQIA 3DRXA 2VPKA 2YY9A 3HVEB 3ZRFB 3WSOB 4N9F5 1R2BA 2C9WC 3HU6A 1HV2A 2E32B 4J8ZA 3ZRCB 4W9JB 2NN2A 4W9DB 4HXIA 4JGHC 4CXJA 3C6PA 4BKSB 1EOFA 1S1GA 5DAFA 3ZKJB 2Q81A 5FTAA 4W9GB 1R29A 4CP3A 5BO4C 3HVEA 2FNJC 2P1MA 3DRZA 2PPIA 3E4UA 4ZGCA 1BUOA 1DSXA 1LM8C 3DRYA 5HZGC 5A6RA 4JTDB 4U2NA 3I3NA 5H7HA 5EUPA 4AP2A 4AWJB 2IHCA 4B95B 4B9KE 1QDVA 2OVRA 3KVTA 3ZTDB 4JTCB 2P1QA 2P1PA 3B84A 1VCBB 1R28A 4W9KB 3GA1A 4CXTA 1EOEA 1NN7A 1P22B 3LUTB 4UYIA 4I6JC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LBZ A;  1T1D A;  2NZ0 B;  3OGM A;  3MKS A;  2Z8H A;  3C6O A;  3ZNG B;  5HYW B;  2I2R A;  2IZV C;  2VKP A;  4U2M A;  3BIM A;  2ASS A;  1NEX A;  3OGK A;  5BXB A;  1FS1 B;  3HTM A;  4BGC A;  3OHU A;  4CXI A;  3DCG B;  1FQV B;  4CRH A;  4W9H B;  2IF5 A;  1FS2 B;  2AST A;  1LQB B;  2A79 B;  5H7G A;  4EOZ A;  3LNM B;  2MA9 C;  2OVP A;  4UIJ A;  3ZTC B;  2P1N A;  4ZOU A;  3OGL A;  3V7D A;  3M52 A;  1EXB E;  1A68 A;  2E31 B;  4W9H H;  2JZ3 C;  1EOD A;  5BXD A;  4W9C B;  4W9E B;  4B9K B;  5IBK A;  5LLI B;  2OVQ A;  5BXH A;  3M4T A;  4APF A;  2P1O A;  2R9R B;  3L2O A;  5DAD A;  1LDK D;  4W9L B;  4WQO C;  5A15 A;  1QDW A;  3M5B A;  4BKT B;  4W9F B;  4U77 A;  3OHV A;  3ZUN B;  4AJY C;  3M8V A;  4JTA B;  3FKC A;  4W9I B;  1CS3 A;  5JH5 B;  3C6N A;  3HQI A;  3HVE B;  2VPK A;  2YY9 A;  3ZRF B;  3WSO B;  4N9F 5;  1R2B A;  2C9W C;  3HU6 A;  1HV2 A;  2E32 B;  4J8Z A;  3ZRC B;  4W9J B;  2NN2 A;  4W9D B;  4HXI A;  4JGH C;  4CXJ A;  3C6P A;  4BKS B;  1EOF A;  1S1G A;  5DAF A;  3ZKJ B;  2Q81 A;  5FTA A;  4W9G B;  1R29 A;  4CP3 A;  5BO4 C;  3HVE A;  2FNJ C;  2P1M A;  3DRZ A;  2PPI A;  3E4U A;  1BUO A;  1DSX A;  1LM8 C;  5HZG C;  5A6R A;  4JTD B;  4U2N A;  3I3N A;  5H7H A;  5EUP A;  4AP2 A;  4AWJ B;  2IHC A;  4B95 B;  4B9K E;  1QDV A;  2OVR A;  3KVT A;  3ZTD B;  4JTC B;  2P1Q A;  2P1P A;  3B84 A;  1VCB B;  1R28 A;  4W9K B;  3GA1 A;  4CXT A;  1EOE A;  1NN7 A;  1P22 B;  3LUT B;  4UYI A;  4I6J C; 
#chains in the Genus database with same CATH topology
 3LBZ A;  1T1D A;  2NZ0 B;  3OGM A;  3MKS A;  2Z8H A;  3C6O A;  3ZNG B;  5HYW B;  2I2R A;  2IZV C;  2VKP A;  4U2M A;  3BIM A;  2ASS A;  1NEX A;  3OGK A;  5BXB A;  1FS1 B;  3HTM A;  4BGC A;  3OHU A;  4CXI A;  3DCG B;  1FQV B;  4CRH A;  4W9H B;  2IF5 A;  1FS2 B;  2AST A;  1LQB B;  2A79 B;  5H7G A;  4EOZ A;  3LNM B;  2MA9 C;  2OVP A;  4UIJ A;  3ZTC B;  2P1N A;  4ZOU A;  3OGL A;  3V7D A;  3M52 A;  1EXB E;  1A68 A;  2E31 B;  4W9H H;  2JZ3 C;  1EOD A;  5BXD A;  4W9C B;  4W9E B;  4B9K B;  5IBK A;  5LLI B;  2OVQ A;  5BXH A;  3M4T A;  4APF A;  2P1O A;  2R9R B;  3L2O A;  5DAD A;  1LDK D;  4YY8 A;  4W9L B;  4WQO C;  5A15 A;  1QDW A;  3M5B A;  4BKT B;  4W9F B;  4U77 A;  3OHV A;  3ZUN B;  4AJY C;  3M8V A;  4JTA B;  3FKC A;  4W9I B;  1CS3 A;  5JH5 B;  3C6N A;  3HQI A;  3DRX A;  2VPK A;  2YY9 A;  3HVE B;  3ZRF B;  3WSO B;  4N9F 5;  1R2B A;  2C9W C;  3HU6 A;  1HV2 A;  2E32 B;  4J8Z A;  3ZRC B;  4W9J B;  2NN2 A;  4W9D B;  4HXI A;  4JGH C;  4CXJ A;  3C6P A;  4BKS B;  1EOF A;  1S1G A;  5DAF A;  3ZKJ B;  2Q81 A;  5FTA A;  4W9G B;  1R29 A;  4CP3 A;  5BO4 C;  3HVE A;  2FNJ C;  2P1M A;  3DRZ A;  2PPI A;  3E4U A;  4ZGC A;  1BUO A;  1DSX A;  1LM8 C;  3DRY A;  5HZG C;  5A6R A;  4JTD B;  4U2N A;  3I3N A;  5H7H A;  5EUP A;  4AP2 A;  4AWJ B;  2IHC A;  4B95 B;  4B9K E;  1QDV A;  2OVR A;  3KVT A;  3ZTD B;  4JTC B;  2P1Q A;  2P1P A;  3B84 A;  1VCB B;  1R28 A;  4W9K B;  3GA1 A;  4CXT A;  1EOE A;  1NN7 A;  1P22 B;  3LUT B;  4UYI A;  4I6J C; 
#chains in the Genus database with same CATH homology
 3LBZ A;  1T1D A;  2NZ0 B;  3OGM A;  3MKS A;  2Z8H A;  3C6O A;  3ZNG B;  5HYW B;  2I2R A;  2IZV C;  2VKP A;  4U2M A;  3BIM A;  2ASS A;  1NEX A;  3OGK A;  5BXB A;  1FS1 B;  3HTM A;  4BGC A;  3OHU A;  4CXI A;  3DCG B;  1FQV B;  4CRH A;  4W9H B;  2IF5 A;  1FS2 B;  2AST A;  1LQB B;  2A79 B;  5H7G A;  4EOZ A;  3LNM B;  2MA9 C;  2OVP A;  4UIJ A;  3ZTC B;  2P1N A;  4ZOU A;  3OGL A;  3V7D A;  3M52 A;  1EXB E;  1A68 A;  2E31 B;  4W9H H;  2JZ3 C;  1EOD A;  5BXD A;  4W9C B;  4W9E B;  4B9K B;  5IBK A;  5LLI B;  2OVQ A;  5BXH A;  3M4T A;  4APF A;  2P1O A;  2R9R B;  3L2O A;  5DAD A;  1LDK D;  4YY8 A;  4W9L B;  4WQO C;  5A15 A;  1QDW A;  3M5B A;  4BKT B;  4W9F B;  4U77 A;  3OHV A;  3ZUN B;  4AJY C;  3M8V A;  4JTA B;  3FKC A;  4W9I B;  1CS3 A;  5JH5 B;  3C6N A;  3HQI A;  3DRX A;  2VPK A;  2YY9 A;  3HVE B;  3ZRF B;  3WSO B;  4N9F 5;  1R2B A;  2C9W C;  3HU6 A;  1HV2 A;  2E32 B;  4J8Z A;  3ZRC B;  4W9J B;  2NN2 A;  4W9D B;  4HXI A;  4JGH C;  4CXJ A;  3C6P A;  4BKS B;  1EOF A;  1S1G A;  5DAF A;  3ZKJ B;  2Q81 A;  5FTA A;  4W9G B;  1R29 A;  4CP3 A;  5BO4 C;  3HVE A;  2FNJ C;  2P1M A;  3DRZ A;  2PPI A;  3E4U A;  4ZGC A;  1BUO A;  1DSX A;  1LM8 C;  3DRY A;  5HZG C;  5A6R A;  4JTD B;  4U2N A;  3I3N A;  5H7H A;  5EUP A;  4AP2 A;  4AWJ B;  2IHC A;  4B95 B;  4B9K E;  1QDV A;  2OVR A;  3KVT A;  3ZTD B;  4JTC B;  2P1Q A;  2P1P A;  3B84 A;  1VCB B;  1R28 A;  4W9K B;  3GA1 A;  4CXT A;  1EOE A;  1NN7 A;  1P22 B;  3LUT B;  4UYI A;  4I6J C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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