5FTAA

Crystal structure of the n-terminal btb domain of human kctd10
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
101
structure length
101
Chain Sequence
SSKYVKLNVGGALYYTTMQTLTKQDTMLKAMLSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
pubmed doi rcsb
molecule tags Transferase
source organism Homo sapiens
molecule keywords BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEG
total genus 28
structure length 101
sequence length 101
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2016-01-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 5ftaA00
3ZKJB 4CRHA 4I6JC 2C9WC 2P1OA 5EUPA 1LM8C 1LQBB 2E31B 1EOEA 4AWJB 1T1DA 2OVQA 2Q81A 3HQIA 4W9FB 1FQVB 4U2MA 4CXIA 1BUOA 2ASSA 2VPKA 1EXBE 2OVRA 3ZRCB 2P1QA 2P1NA 4JGHC 4N9F5 4CXJA 4B95B 4CP3A 3L2OA 1FS1B 3FKCA 4W9IB 4W9HH 1QDWA 2P1MA 4J8ZA 3B84A 3ZUNB 4B9KB 2VKPA 1CS3A 3I3NA 5BXDA 2Z8HA 3M5BA 3C6PA 4W9DB 3ZTCB 1FS2B 2PPIA 5DAFA 2YY9A 5A15A 2ASTA 5A6RA 5H7GA 3M4TA 3DRZA 1R29A 5JH5B 1R2BA 3LNMB 4U2NA 3OGLA 3ZTDB 4B9KE 2I2RA 5H7HA 3WSOB 5BXBA 3OHUA 3GA1A 4CXTA 4ZOUA 1LDKD 1R28A 3M8VA 1DSXA 2JZ3C 4JTCB 1NN7A 3MKSA 4BGCA 1S1GA 4EOZA 2OVPA 4W9LB 5HZGC 4AP2A 4W9EB 4W9KB 2MA9C 4W9GB 2P1PA 3ZNGB 5FTAA 4WQOC 4APFA 2IZVC 3OGKA 3LBZA 2A79B 4JTAB 4UYIA 4JTDB 4BKSB 4BKTB 2NZ0B 1VCBB 1EOFA 3ZRFB 3HVEA 4W9CB 3C6NA 5HYWB 3KVTA 2IHCA 3HVEB 2FNJC 3HTMA 3OHVA 3E4UA 5BXHA 3LUTB 1NEXA 4AJYC 4U77A 5DADA 5LLIB 1QDVA 3OGMA 3HU6A 4HXIA 4W9JB 2E32B 1HV2A 3DCGB 2R9RB 3M52A 4W9HB 5BO4C 5IBKA 1EODA 2IF5A 3V7DA 3BIMA 3C6OA 4UIJA 2NN2A 1P22B 1A68A
chains in the Genus database with same CATH superfamily
3ZKJB 4CRHA 4I6JC 2C9WC 4YY8A 2P1OA 5EUPA 1LM8C 1LQBB 2E31B 1EOEA 4AWJB 1T1DA 2OVQA 2Q81A 3HQIA 4W9FB 1FQVB 4U2MA 4CXIA 1BUOA 2ASSA 2VPKA 1EXBE 2OVRA 3ZRCB 2P1QA 2P1NA 4JGHC 4N9F5 4CXJA 4B95B 4CP3A 3L2OA 1FS1B 3FKCA 4W9IB 4W9HH 1QDWA 2P1MA 4J8ZA 3B84A 3ZUNB 4B9KB 2VKPA 1CS3A 3I3NA 5BXDA 2Z8HA 3M5BA 3C6PA 4W9DB 3ZTCB 1FS2B 2PPIA 5DAFA 2YY9A 5A15A 2ASTA 5A6RA 5H7GA 3M4TA 3DRZA 1R29A 5JH5B 1R2BA 3LNMB 4U2NA 3OGLA 3ZTDB 4B9KE 4ZGCA 2I2RA 5H7HA 3WSOB 5BXBA 3OHUA 3DRYA 3GA1A 4CXTA 4ZOUA 1LDKD 1R28A 3M8VA 1DSXA 2JZ3C 4JTCB 1NN7A 3MKSA 4BGCA 1S1GA 4EOZA 2OVPA 4W9LB 5HZGC 4AP2A 4W9EB 4W9KB 2MA9C 4W9GB 2P1PA 3ZNGB 5FTAA 4WQOC 4APFA 2IZVC 3OGKA 3LBZA 2A79B 4JTAB 4UYIA 4JTDB 4BKSB 4BKTB 2NZ0B 1VCBB 1EOFA 3ZRFB 3HVEA 4W9CB 3C6NA 5HYWB 3KVTA 2IHCA 3HVEB 2FNJC 3HTMA 3OHVA 3E4UA 5BXHA 3LUTB 1NEXA 4AJYC 4U77A 5DADA 5LLIB 1QDVA 3OGMA 3HU6A 4HXIA 4W9JB 2E32B 1HV2A 3DCGB 2R9RB 3M52A 4W9HB 5BO4C 5IBKA 1EODA 2IF5A 3V7DA 3BIMA 3C6OA 4UIJA 2NN2A 1P22B 1A68A 3DRXA
chains in the Genus database with same CATH topology
3ZKJB 4CRHA 4I6JC 2C9WC 4YY8A 2P1OA 5EUPA 1LM8C 1LQBB 2E31B 1EOEA 4AWJB 1T1DA 2OVQA 2Q81A 3HQIA 4W9FB 1FQVB 4U2MA 4CXIA 1BUOA 2ASSA 2VPKA 1EXBE 2OVRA 3ZRCB 2P1QA 2P1NA 4JGHC 4N9F5 4CXJA 4B95B 4CP3A 3L2OA 1FS1B 3FKCA 4W9IB 4W9HH 1QDWA 2P1MA 4J8ZA 3B84A 3ZUNB 4B9KB 2VKPA 1CS3A 3I3NA 5BXDA 2Z8HA 3M5BA 3C6PA 4W9DB 3ZTCB 1FS2B 2PPIA 5DAFA 2YY9A 5A15A 2ASTA 5A6RA 5H7GA 3M4TA 3DRZA 1R29A 5JH5B 1R2BA 3LNMB 4U2NA 3OGLA 3ZTDB 4B9KE 4ZGCA 2I2RA 5H7HA 3WSOB 5BXBA 3OHUA 3DRYA 3GA1A 4CXTA 4ZOUA 1LDKD 1R28A 3M8VA 1DSXA 2JZ3C 4JTCB 1NN7A 3MKSA 4BGCA 1S1GA 4EOZA 2OVPA 4W9LB 5HZGC 4AP2A 4W9EB 4W9KB 2MA9C 4W9GB 2P1PA 3ZNGB 5FTAA 4WQOC 4APFA 2IZVC 3OGKA 3LBZA 2A79B 4JTAB 4UYIA 4JTDB 4BKSB 4BKTB 2NZ0B 1VCBB 1EOFA 3ZRFB 3HVEA 4W9CB 3C6NA 5HYWB 3KVTA 2IHCA 3HVEB 2FNJC 3HTMA 3OHVA 3E4UA 5BXHA 3LUTB 1NEXA 4AJYC 4U77A 5DADA 5LLIB 1QDVA 3OGMA 3HU6A 4HXIA 4W9JB 2E32B 1HV2A 3DCGB 2R9RB 3M52A 4W9HB 5BO4C 5IBKA 1EODA 2IF5A 3V7DA 3BIMA 3C6OA 4UIJA 2NN2A 1P22B 1A68A 3DRXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ZKJ B;  4CRH A;  4I6J C;  2C9W C;  2P1O A;  5EUP A;  1LM8 C;  1LQB B;  2E31 B;  1EOE A;  4AWJ B;  1T1D A;  2OVQ A;  2Q81 A;  3HQI A;  4W9F B;  1FQV B;  4U2M A;  4CXI A;  1BUO A;  2ASS A;  2VPK A;  1EXB E;  2OVR A;  3ZRC B;  2P1Q A;  2P1N A;  4JGH C;  4N9F 5;  4CXJ A;  4B95 B;  4CP3 A;  3L2O A;  1FS1 B;  3FKC A;  4W9I B;  4W9H H;  1QDW A;  2P1M A;  4J8Z A;  3B84 A;  3ZUN B;  4B9K B;  2VKP A;  1CS3 A;  3I3N A;  5BXD A;  2Z8H A;  3M5B A;  3C6P A;  4W9D B;  3ZTC B;  1FS2 B;  2PPI A;  5DAF A;  2YY9 A;  5A15 A;  2AST A;  5A6R A;  5H7G A;  3M4T A;  3DRZ A;  1R29 A;  5JH5 B;  1R2B A;  3LNM B;  4U2N A;  3OGL A;  3ZTD B;  4B9K E;  2I2R A;  5H7H A;  3WSO B;  5BXB A;  3OHU A;  3GA1 A;  4CXT A;  4ZOU A;  1LDK D;  1R28 A;  3M8V A;  1DSX A;  2JZ3 C;  4JTC B;  1NN7 A;  3MKS A;  4BGC A;  1S1G A;  4EOZ A;  2OVP A;  4W9L B;  5HZG C;  4AP2 A;  4W9E B;  4W9K B;  2MA9 C;  4W9G B;  2P1P A;  3ZNG B;  5FTA A;  4WQO C;  4APF A;  2IZV C;  3OGK A;  3LBZ A;  2A79 B;  4JTA B;  4UYI A;  4JTD B;  4BKS B;  4BKT B;  2NZ0 B;  1VCB B;  1EOF A;  3ZRF B;  3HVE A;  4W9C B;  3C6N A;  5HYW B;  3KVT A;  2IHC A;  3HVE B;  2FNJ C;  3HTM A;  3OHV A;  3E4U A;  5BXH A;  3LUT B;  1NEX A;  4AJY C;  4U77 A;  5DAD A;  5LLI B;  1QDV A;  3OGM A;  3HU6 A;  4HXI A;  4W9J B;  2E32 B;  1HV2 A;  3DCG B;  2R9R B;  3M52 A;  4W9H B;  5BO4 C;  5IBK A;  1EOD A;  2IF5 A;  3V7D A;  3BIM A;  3C6O A;  4UIJ A;  2NN2 A;  1P22 B;  1A68 A; 
#chains in the Genus database with same CATH topology
 3ZKJ B;  4CRH A;  4I6J C;  2C9W C;  4YY8 A;  2P1O A;  5EUP A;  1LM8 C;  1LQB B;  2E31 B;  1EOE A;  4AWJ B;  1T1D A;  2OVQ A;  2Q81 A;  3HQI A;  4W9F B;  1FQV B;  4U2M A;  4CXI A;  1BUO A;  2ASS A;  2VPK A;  1EXB E;  2OVR A;  3ZRC B;  2P1Q A;  2P1N A;  4JGH C;  4N9F 5;  4CXJ A;  4B95 B;  4CP3 A;  3L2O A;  1FS1 B;  3FKC A;  4W9I B;  4W9H H;  1QDW A;  2P1M A;  4J8Z A;  3B84 A;  3ZUN B;  4B9K B;  2VKP A;  1CS3 A;  3I3N A;  5BXD A;  2Z8H A;  3M5B A;  3C6P A;  4W9D B;  3ZTC B;  1FS2 B;  2PPI A;  5DAF A;  2YY9 A;  5A15 A;  2AST A;  5A6R A;  5H7G A;  3M4T A;  3DRZ A;  1R29 A;  5JH5 B;  1R2B A;  3LNM B;  4U2N A;  3OGL A;  3ZTD B;  4B9K E;  4ZGC A;  2I2R A;  5H7H A;  3WSO B;  5BXB A;  3OHU A;  3DRY A;  3GA1 A;  4CXT A;  4ZOU A;  1LDK D;  1R28 A;  3M8V A;  1DSX A;  2JZ3 C;  4JTC B;  1NN7 A;  3MKS A;  4BGC A;  1S1G A;  4EOZ A;  2OVP A;  4W9L B;  5HZG C;  4AP2 A;  4W9E B;  4W9K B;  2MA9 C;  4W9G B;  2P1P A;  3ZNG B;  5FTA A;  4WQO C;  4APF A;  2IZV C;  3OGK A;  3LBZ A;  2A79 B;  4JTA B;  4UYI A;  4JTD B;  4BKS B;  4BKT B;  2NZ0 B;  1VCB B;  1EOF A;  3ZRF B;  3HVE A;  4W9C B;  3C6N A;  5HYW B;  3KVT A;  2IHC A;  3HVE B;  2FNJ C;  3HTM A;  3OHV A;  3E4U A;  5BXH A;  3LUT B;  1NEX A;  4AJY C;  4U77 A;  5DAD A;  5LLI B;  1QDV A;  3OGM A;  3HU6 A;  4HXI A;  4W9J B;  2E32 B;  1HV2 A;  3DCG B;  2R9R B;  3M52 A;  4W9H B;  5BO4 C;  5IBK A;  1EOD A;  2IF5 A;  3V7D A;  3BIM A;  3C6O A;  4UIJ A;  2NN2 A;  1P22 B;  1A68 A;  3DRX A; 
#chains in the Genus database with same CATH homology
 3ZKJ B;  4CRH A;  4I6J C;  2C9W C;  4YY8 A;  2P1O A;  5EUP A;  1LM8 C;  1LQB B;  2E31 B;  1EOE A;  4AWJ B;  1T1D A;  2OVQ A;  2Q81 A;  3HQI A;  4W9F B;  1FQV B;  4U2M A;  4CXI A;  1BUO A;  2ASS A;  2VPK A;  1EXB E;  2OVR A;  3ZRC B;  2P1Q A;  2P1N A;  4JGH C;  4N9F 5;  4CXJ A;  4B95 B;  4CP3 A;  3L2O A;  1FS1 B;  3FKC A;  4W9I B;  4W9H H;  1QDW A;  2P1M A;  4J8Z A;  3B84 A;  3ZUN B;  4B9K B;  2VKP A;  1CS3 A;  3I3N A;  5BXD A;  2Z8H A;  3M5B A;  3C6P A;  4W9D B;  3ZTC B;  1FS2 B;  2PPI A;  5DAF A;  2YY9 A;  5A15 A;  2AST A;  5A6R A;  5H7G A;  3M4T A;  3DRZ A;  1R29 A;  5JH5 B;  1R2B A;  3LNM B;  4U2N A;  3OGL A;  3ZTD B;  4B9K E;  4ZGC A;  2I2R A;  5H7H A;  3WSO B;  5BXB A;  3OHU A;  3DRY A;  3GA1 A;  4CXT A;  4ZOU A;  1LDK D;  1R28 A;  3M8V A;  1DSX A;  2JZ3 C;  4JTC B;  1NN7 A;  3MKS A;  4BGC A;  1S1G A;  4EOZ A;  2OVP A;  4W9L B;  5HZG C;  4AP2 A;  4W9E B;  4W9K B;  2MA9 C;  4W9G B;  2P1P A;  3ZNG B;  5FTA A;  4WQO C;  4APF A;  2IZV C;  3OGK A;  3LBZ A;  2A79 B;  4JTA B;  4UYI A;  4JTD B;  4BKS B;  4BKT B;  2NZ0 B;  1VCB B;  1EOF A;  3ZRF B;  3HVE A;  4W9C B;  3C6N A;  5HYW B;  3KVT A;  2IHC A;  3HVE B;  2FNJ C;  3HTM A;  3OHV A;  3E4U A;  5BXH A;  3LUT B;  1NEX A;  4AJY C;  4U77 A;  5DAD A;  5LLI B;  1QDV A;  3OGM A;  3HU6 A;  4HXI A;  4W9J B;  2E32 B;  1HV2 A;  3DCG B;  2R9R B;  3M52 A;  4W9H B;  5BO4 C;  5IBK A;  1EOD A;  2IF5 A;  3V7D A;  3BIM A;  3C6O A;  4UIJ A;  2NN2 A;  1P22 B;  1A68 A;  3DRX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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