3MHRA

14-3-3 sigma in complex with yap ps127-peptide
Total Genus 102

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
102
sequence length
236
structure length
235
Chain Sequence
GAMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (3-16)TI2 (-2-1)AH3 (39-70)AH5 (114-134)TII1 (71-74)AH4 (79-104)3H1 (107-110)TIV1 (104-107)EMPTYAH7 (167-183)TI3 (163-166)AH9 (210-230)3H2 (205-207)AH2 (19-32)AH8 (187-203)AH6 (139-161)Updating...
connected with : NaN
molecule tags Peptide binding protein
source organism Homo sapiens
publication title Structure of a 14-3-3[sigma]-YAP phosphopeptide complex at 1.15 A resolution
pubmed doi rcsb
molecule keywords 14-3-3 protein sigma
total genus 102
structure length 235
sequence length 236
ec nomenclature
pdb deposition date 2010-04-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 3mhrA00
2BQ0A 3SMNA 4O46A 4DHPA 3P1NA 1O9CA 2O98A 1IB1A 3SP5A 3UBWA 1YZ5A 5BTVA 3SPRA 1QJAA 5D3FA 4QLIA 3IQVA 5EWZA 4DHTA 5LU1A 3P1OA 5J31A 3NKXA 3T0MA 4DX0A 4FL5A 3SMKA 4GNTA 2C1NA 4Y32A 4IEAA 3EFZA 3UX0A 2O02A 4ZQ0A 4DATA 2B05A 2C63A 3P1SA 3CU8A 4BG6A 5D2DA 4DHMA 3RDHA 1A37A 1O9FA 3O8IA 4WRQA 3AXYC 5LU2A 3SMOA 2O8PA 1QJBA 4FR3A 2WH0A 4DHQA 3M50A 2NPMA 1A4OA 4DAUA 3P1RA 4N7YA 2BTPA 3P1PA 5LX2A 2C23A 3LW1A 4N84A 4N7GA 3SMMA 3UZDA 4JC3A 1YWTA 4HKCA 4IHLA 4F7RA 4DHOA 3UALA 3E6YA 5BY9A 4E2EA 4DHSA 4JDDA 3IQJA 3U9XA 4ZDRA 4DNKA 4DHNA 4Y3BA 4DHRA 4J6SA 4FJ3A 2BR9A 3SMLA 4DHUA 4Y5IA 5EXAA 2C74A 5LVZA 3T0LA 2C1JA 1O9EA 5IQPA 5LHOA 5F74A 3P1QA 3IQUA 2V7DA 3MHRA 1O9DA 1A38A 3M51A 5HF3A 5D3EA
chains in the Genus database with same CATH superfamily
2BQ0A 4QX2A 3SMNA 4O46A 4DHPA 3P1NA 1I5PA 1O9CA 2O98A 1IB1A 1URJA 3SP5A 3UBWA 1YZ5A 5BTVA 3SPRA 4QX0A 1QJAA 5D3FA 4QLIA 3IQVA 5EWZA 4DHTA 5LU1A 3P1OA 5J31A 3NKXA 3T0MA 4DX0A 4FL5A 3SMKA 4GNTA 2C1NA 4Y32A 1JI6A 4IEAA 3EFZA 3UX0A 4D8MA 2O02A 4ZQ0A 4DATA 2B05A 2C63A 3P1SA 3CU8A 4BG6A 1CIYA 5D2DA 4DHMA 3RDHA 4W8JA 4ARXA 1A37A 3CQCA 1O9FA 3O8IA 4WRQA 3AXYC 5LU2A 3SMOA 2O8PA 1QJBA 4ARYA 4FR3A 1W99A 2WH0A 4DHQA 4QX1A 3M50A 1S2XA 1DLCA 2NPMA 1A4OA 4DAUA 3P1RA 4N7YA 2BTPA 3P1PA 5LX2A 2C23A 3CQGA 3LW1A 4N84A 4N7GA 3SMMA 3UZDA 4JC3A 1YWTA 4HKCA 4IHLA 4F7RA 3ZHEB 2C9KA 4MOAA 4DHOA 3UALA 3E6YA 5BY9A 4E2EA 4DHSA 4JDDA 3IQJA 3U9XA 4ZDRA 4DNKA 4DHNA 4Y3BA 3X0UA 4DHRA 4J6SA 4FJ3A 2BR9A 3SMLA 4DHUA 4Y5IA 5EXAA 3EB7A 2C74A 5LVZA 3T0LA 2C1JA 1O9EA 5IQPA 5LHOA 5F74A 3P1QA 4QX3A 3IQUA 2V7DA 3MHRA 1O9DA 1A38A 3M51A 5HF3A 3I4RA 5D3EA
chains in the Genus database with same CATH topology
2BQ0A 3SMNA 4O46A 4DHPA 3P1NA 1O9CA 2O98A 1IB1A 3SP5A 3UBWA 1YZ5A 5BTVA 3SPRA 1QJAA 5D3FA 4QLIA 3IQVA 5EWZA 4DHTA 5LU1A 3P1OA 5J31A 3NKXA 3T0MA 4DX0A 4FL5A 3SMKA 4GNTA 2C1NA 4Y32A 4IEAA 3EFZA 3UX0A 2O02A 4ZQ0A 4DATA 2B05A 2C63A 3P1SA 3CU8A 4BG6A 5D2DA 4DHMA 3RDHA 1A37A 1O9FA 3O8IA 4WRQA 3AXYC 5LU2A 3SMOA 2O8PA 1QJBA 4FR3A 2WH0A 4DHQA 3M50A 2NPMA 1A4OA 4DAUA 3P1RA 4N7YA 2BTPA 3P1PA 5LX2A 2C23A 3LW1A 4N84A 4N7GA 3SMMA 3UZDA 4JC3A 1YWTA 4HKCA 4IHLA 4F7RA 4DHOA 3UALA 3E6YA 5BY9A 4E2EA 4DHSA 4JDDA 3IQJA 3U9XA 4ZDRA 4DNKA 4DHNA 4Y3BA 4DHRA 4J6SA 4FJ3A 2BR9A 3SMLA 4DHUA 4Y5IA 5EXAA 2C74A 5LVZA 3T0LA 2C1JA 1O9EA 5IQPA 5LHOA 5F74A 3P1QA 3IQUA 2V7DA 3MHRA 1O9DA 1A38A 3M51A 5HF3A 5D3EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BQ0 A;  3SMN A;  4O46 A;  4DHP A;  3P1N A;  1O9C A;  2O98 A;  1IB1 A;  3SP5 A;  3UBW A;  1YZ5 A;  5BTV A;  3SPR A;  1QJA A;  5D3F A;  4QLI A;  3IQV A;  5EWZ A;  4DHT A;  5LU1 A;  3P1O A;  5J31 A;  3NKX A;  3T0M A;  4DX0 A;  4FL5 A;  3SMK A;  4GNT A;  2C1N A;  4Y32 A;  4IEA A;  3EFZ A;  3UX0 A;  2O02 A;  4ZQ0 A;  4DAT A;  2B05 A;  2C63 A;  3P1S A;  3CU8 A;  4BG6 A;  5D2D A;  4DHM A;  3RDH A;  1A37 A;  1O9F A;  3O8I A;  4WRQ A;  3AXY C;  5LU2 A;  3SMO A;  2O8P A;  1QJB A;  4FR3 A;  2WH0 A;  4DHQ A;  3M50 A;  2NPM A;  1A4O A;  4DAU A;  3P1R A;  4N7Y A;  2BTP A;  3P1P A;  5LX2 A;  2C23 A;  3LW1 A;  4N84 A;  4N7G A;  3SMM A;  3UZD A;  4JC3 A;  1YWT A;  4HKC A;  4IHL A;  4F7R A;  4DHO A;  3UAL A;  3E6Y A;  5BY9 A;  4E2E A;  4DHS A;  4JDD A;  3IQJ A;  3U9X A;  4ZDR A;  4DNK A;  4DHN A;  4Y3B A;  4DHR A;  4J6S A;  4FJ3 A;  2BR9 A;  3SML A;  4DHU A;  4Y5I A;  5EXA A;  2C74 A;  5LVZ A;  3T0L A;  2C1J A;  1O9E A;  5IQP A;  5LHO A;  5F74 A;  3P1Q A;  3IQU A;  2V7D A;  3MHR A;  1O9D A;  1A38 A;  3M51 A;  5HF3 A;  5D3E A; 
#chains in the Genus database with same CATH topology
 2BQ0 A;  4QX2 A;  3SMN A;  4O46 A;  4DHP A;  3P1N A;  1I5P A;  1O9C A;  2O98 A;  1IB1 A;  1URJ A;  3SP5 A;  3UBW A;  1YZ5 A;  5BTV A;  3SPR A;  4QX0 A;  1QJA A;  5D3F A;  4QLI A;  3IQV A;  5EWZ A;  4DHT A;  5LU1 A;  3P1O A;  5J31 A;  3NKX A;  3T0M A;  4DX0 A;  4FL5 A;  3SMK A;  4GNT A;  2C1N A;  4Y32 A;  1JI6 A;  4IEA A;  3EFZ A;  3UX0 A;  4D8M A;  2O02 A;  4ZQ0 A;  4DAT A;  2B05 A;  2C63 A;  3P1S A;  3CU8 A;  4BG6 A;  1CIY A;  5D2D A;  4DHM A;  3RDH A;  4W8J A;  4ARX A;  1A37 A;  3CQC A;  1O9F A;  3O8I A;  4WRQ A;  3AXY C;  5LU2 A;  3SMO A;  2O8P A;  1QJB A;  4ARY A;  4FR3 A;  1W99 A;  2WH0 A;  4DHQ A;  4QX1 A;  3M50 A;  1S2X A;  1DLC A;  2NPM A;  1A4O A;  4DAU A;  3P1R A;  4N7Y A;  2BTP A;  3P1P A;  5LX2 A;  2C23 A;  3CQG A;  3LW1 A;  4N84 A;  4N7G A;  3SMM A;  3UZD A;  4JC3 A;  1YWT A;  4HKC A;  4IHL A;  4F7R A;  3ZHE B;  2C9K A;  4MOA A;  4DHO A;  3UAL A;  3E6Y A;  5BY9 A;  4E2E A;  4DHS A;  4JDD A;  3IQJ A;  3U9X A;  4ZDR A;  4DNK A;  4DHN A;  4Y3B A;  3X0U A;  4DHR A;  4J6S A;  4FJ3 A;  2BR9 A;  3SML A;  4DHU A;  4Y5I A;  5EXA A;  3EB7 A;  2C74 A;  5LVZ A;  3T0L A;  2C1J A;  1O9E A;  5IQP A;  5LHO A;  5F74 A;  3P1Q A;  4QX3 A;  3IQU A;  2V7D A;  3MHR A;  1O9D A;  1A38 A;  3M51 A;  5HF3 A;  3I4R A;  5D3E A; 
#chains in the Genus database with same CATH homology
 2BQ0 A;  3SMN A;  4O46 A;  4DHP A;  3P1N A;  1O9C A;  2O98 A;  1IB1 A;  3SP5 A;  3UBW A;  1YZ5 A;  5BTV A;  3SPR A;  1QJA A;  5D3F A;  4QLI A;  3IQV A;  5EWZ A;  4DHT A;  5LU1 A;  3P1O A;  5J31 A;  3NKX A;  3T0M A;  4DX0 A;  4FL5 A;  3SMK A;  4GNT A;  2C1N A;  4Y32 A;  4IEA A;  3EFZ A;  3UX0 A;  2O02 A;  4ZQ0 A;  4DAT A;  2B05 A;  2C63 A;  3P1S A;  3CU8 A;  4BG6 A;  5D2D A;  4DHM A;  3RDH A;  1A37 A;  1O9F A;  3O8I A;  4WRQ A;  3AXY C;  5LU2 A;  3SMO A;  2O8P A;  1QJB A;  4FR3 A;  2WH0 A;  4DHQ A;  3M50 A;  2NPM A;  1A4O A;  4DAU A;  3P1R A;  4N7Y A;  2BTP A;  3P1P A;  5LX2 A;  2C23 A;  3LW1 A;  4N84 A;  4N7G A;  3SMM A;  3UZD A;  4JC3 A;  1YWT A;  4HKC A;  4IHL A;  4F7R A;  4DHO A;  3UAL A;  3E6Y A;  5BY9 A;  4E2E A;  4DHS A;  4JDD A;  3IQJ A;  3U9X A;  4ZDR A;  4DNK A;  4DHN A;  4Y3B A;  4DHR A;  4J6S A;  4FJ3 A;  2BR9 A;  3SML A;  4DHU A;  4Y5I A;  5EXA A;  2C74 A;  5LVZ A;  3T0L A;  2C1J A;  1O9E A;  5IQP A;  5LHO A;  5F74 A;  3P1Q A;  3IQU A;  2V7D A;  3MHR A;  1O9D A;  1A38 A;  3M51 A;  5HF3 A;  5D3E A; 
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