3P1PA

Crystal structure of human 14-3-3 sigma c38n/n166h in complex with task-3 peptide
Total Genus 106

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
106
sequence length
236
structure length
236
Chain Sequence
GAMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSNEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTHPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (3-16)TI2 (-2-1)AH2 (19-32)AH3 (38-70)TII1 (71-74)AH4 (79-104)EMPTYAH5 (114-134)AH7 (167-183)TI3 (163-166)AH9 (210-230)3H2 (205-207)TIV1 (104-107)3H1 (107-110)AH6 (139-161)AH8 (187-203)Updating...
connected with : NaN
molecule tags Peptide binding protein
source organism Homo sapiens
publication title A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of K+ channels at the cell surface
pubmed doi rcsb
molecule keywords 14-3-3 protein sigma
total genus 106
structure length 236
sequence length 236
ec nomenclature
pdb deposition date 2010-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 3p1pA00
5D3FA 3P1OA 3UX0A 5LX2A 1A38A 4DHNA 3P1QA 4FJ3A 4QLIA 3SMNA 5LHOA 5LU2A 3SMLA 5LU1A 4HKCA 3IQVA 2O02A 3SMKA 2B05A 4DHPA 2C63A 3MHRA 4N7YA 5BY9A 4DHRA 1QJBA 4DHSA 4BG6A 3RDHA 1O9EA 3EFZA 4WRQA 4N7GA 2NPMA 1A37A 3CU8A 3UZDA 3IQJA 1O9CA 1YZ5A 3M51A 2V7DA 3E6YA 4ZQ0A 1QJAA 3P1NA 3P1SA 1YWTA 3T0MA 1IB1A 4GNTA 3LW1A 3U9XA 4E2EA 5D2DA 2WH0A 5IQPA 4Y3BA 4N84A 4FR3A 4DHTA 2BR9A 4DNKA 5HF3A 3SMMA 3NKXA 1A4OA 2O8PA 4JC3A 4IEAA 3UALA 4DHMA 3UBWA 5D3EA 3SMOA 5J31A 3IQUA 2C1NA 1O9FA 3P1PA 3SPRA 5BTVA 3P1RA 4J6SA 4DHOA 3T0LA 4Y32A 4DATA 2BTPA 3O8IA 2C1JA 3SP5A 3AXYC 4DX0A 4DAUA 4DHUA 4JDDA 2BQ0A 3M50A 4Y5IA 4IHLA 2C23A 4DHQA 1O9DA 4O46A 2C74A 4FL5A 5LVZA 4F7RA 5EXAA 2O98A 5EWZA 5F74A 4ZDRA
chains in the Genus database with same CATH superfamily
5D3FA 3P1OA 3UX0A 5LX2A 1A38A 4DHNA 3P1QA 3I4RA 4FJ3A 4QLIA 3SMNA 5LHOA 5LU2A 3SMLA 5LU1A 4HKCA 3IQVA 2O02A 3SMKA 1I5PA 2B05A 4DHPA 2C63A 3ZHEB 3MHRA 4N7YA 5BY9A 4DHRA 1QJBA 4DHSA 4QX2A 4BG6A 3RDHA 1O9EA 1URJA 3EFZA 4WRQA 4N7GA 2NPMA 4QX0A 1A37A 3CU8A 3UZDA 3IQJA 1O9CA 1YZ5A 3M51A 2V7DA 3E6YA 4ZQ0A 4ARYA 1CIYA 3P1NA 1QJAA 3P1SA 4QX3A 3EB7A 3CQCA 2C9KA 1YWTA 3T0MA 1IB1A 4GNTA 3LW1A 3U9XA 4QX1A 4E2EA 2WH0A 5D2DA 5IQPA 4N84A 4Y3BA 4FR3A 4DHTA 2BR9A 4DNKA 5HF3A 3SMMA 3NKXA 1A4OA 2O8PA 4JC3A 4IEAA 3UALA 4DHMA 3UBWA 3CQGA 5D3EA 1JI6A 3SMOA 5J31A 3IQUA 2C1NA 4ARXA 1DLCA 4D8MA 1O9FA 3P1PA 3SPRA 5BTVA 3P1RA 4J6SA 4DHOA 3T0LA 4Y32A 4DATA 2BTPA 1S2XA 3O8IA 2C1JA 3SP5A 3AXYC 3X0UA 4DX0A 4DAUA 4W8JA 4DHUA 4JDDA 2BQ0A 3M50A 4Y5IA 4IHLA 2C23A 4DHQA 1O9DA 4O46A 2C74A 4FL5A 5LVZA 4F7RA 5EXAA 2O98A 1W99A 5EWZA 5F74A 4ZDRA 4MOAA
chains in the Genus database with same CATH topology
5D3FA 3P1OA 3UX0A 5LX2A 1A38A 4DHNA 3P1QA 4FJ3A 4QLIA 3SMNA 5LHOA 5LU2A 3SMLA 5LU1A 4HKCA 3IQVA 2O02A 3SMKA 2B05A 4DHPA 2C63A 3MHRA 4N7YA 5BY9A 4DHRA 1QJBA 4DHSA 4BG6A 3RDHA 1O9EA 3EFZA 4WRQA 4N7GA 2NPMA 1A37A 3CU8A 3UZDA 3IQJA 1O9CA 1YZ5A 3M51A 2V7DA 3E6YA 4ZQ0A 1QJAA 3P1NA 3P1SA 1YWTA 3T0MA 1IB1A 4GNTA 3LW1A 3U9XA 4E2EA 5D2DA 2WH0A 5IQPA 4Y3BA 4N84A 4FR3A 4DHTA 2BR9A 4DNKA 5HF3A 3SMMA 3NKXA 1A4OA 2O8PA 4JC3A 4IEAA 3UALA 4DHMA 3UBWA 5D3EA 3SMOA 5J31A 3IQUA 2C1NA 1O9FA 3P1PA 3SPRA 5BTVA 3P1RA 4J6SA 4DHOA 3T0LA 4Y32A 4DATA 2BTPA 3O8IA 2C1JA 3SP5A 3AXYC 4DX0A 4DAUA 4DHUA 4JDDA 2BQ0A 3M50A 4Y5IA 4IHLA 2C23A 4DHQA 1O9DA 4O46A 2C74A 4FL5A 5LVZA 4F7RA 5EXAA 2O98A 5EWZA 5F74A 4ZDRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D3F A;  3P1O A;  3UX0 A;  5LX2 A;  1A38 A;  4DHN A;  3P1Q A;  4FJ3 A;  4QLI A;  3SMN A;  5LHO A;  5LU2 A;  3SML A;  5LU1 A;  4HKC A;  3IQV A;  2O02 A;  3SMK A;  2B05 A;  4DHP A;  2C63 A;  3MHR A;  4N7Y A;  5BY9 A;  4DHR A;  1QJB A;  4DHS A;  4BG6 A;  3RDH A;  1O9E A;  3EFZ A;  4WRQ A;  4N7G A;  2NPM A;  1A37 A;  3CU8 A;  3UZD A;  3IQJ A;  1O9C A;  1YZ5 A;  3M51 A;  2V7D A;  3E6Y A;  4ZQ0 A;  1QJA A;  3P1N A;  3P1S A;  1YWT A;  3T0M A;  1IB1 A;  4GNT A;  3LW1 A;  3U9X A;  4E2E A;  5D2D A;  2WH0 A;  5IQP A;  4Y3B A;  4N84 A;  4FR3 A;  4DHT A;  2BR9 A;  4DNK A;  5HF3 A;  3SMM A;  3NKX A;  1A4O A;  2O8P A;  4JC3 A;  4IEA A;  3UAL A;  4DHM A;  3UBW A;  5D3E A;  3SMO A;  5J31 A;  3IQU A;  2C1N A;  1O9F A;  3P1P A;  3SPR A;  5BTV A;  3P1R A;  4J6S A;  4DHO A;  3T0L A;  4Y32 A;  4DAT A;  2BTP A;  3O8I A;  2C1J A;  3SP5 A;  3AXY C;  4DX0 A;  4DAU A;  4DHU A;  4JDD A;  2BQ0 A;  3M50 A;  4Y5I A;  4IHL A;  2C23 A;  4DHQ A;  1O9D A;  4O46 A;  2C74 A;  4FL5 A;  5LVZ A;  4F7R A;  5EXA A;  2O98 A;  5EWZ A;  5F74 A;  4ZDR A; 
#chains in the Genus database with same CATH topology
 5D3F A;  3P1O A;  3UX0 A;  5LX2 A;  1A38 A;  4DHN A;  3P1Q A;  3I4R A;  4FJ3 A;  4QLI A;  3SMN A;  5LHO A;  5LU2 A;  3SML A;  5LU1 A;  4HKC A;  3IQV A;  2O02 A;  3SMK A;  1I5P A;  2B05 A;  4DHP A;  2C63 A;  3ZHE B;  3MHR A;  4N7Y A;  5BY9 A;  4DHR A;  1QJB A;  4DHS A;  4QX2 A;  4BG6 A;  3RDH A;  1O9E A;  1URJ A;  3EFZ A;  4WRQ A;  4N7G A;  2NPM A;  4QX0 A;  1A37 A;  3CU8 A;  3UZD A;  3IQJ A;  1O9C A;  1YZ5 A;  3M51 A;  2V7D A;  3E6Y A;  4ZQ0 A;  4ARY A;  1CIY A;  3P1N A;  1QJA A;  3P1S A;  4QX3 A;  3EB7 A;  3CQC A;  2C9K A;  1YWT A;  3T0M A;  1IB1 A;  4GNT A;  3LW1 A;  3U9X A;  4QX1 A;  4E2E A;  2WH0 A;  5D2D A;  5IQP A;  4N84 A;  4Y3B A;  4FR3 A;  4DHT A;  2BR9 A;  4DNK A;  5HF3 A;  3SMM A;  3NKX A;  1A4O A;  2O8P A;  4JC3 A;  4IEA A;  3UAL A;  4DHM A;  3UBW A;  3CQG A;  5D3E A;  1JI6 A;  3SMO A;  5J31 A;  3IQU A;  2C1N A;  4ARX A;  1DLC A;  4D8M A;  1O9F A;  3P1P A;  3SPR A;  5BTV A;  3P1R A;  4J6S A;  4DHO A;  3T0L A;  4Y32 A;  4DAT A;  2BTP A;  1S2X A;  3O8I A;  2C1J A;  3SP5 A;  3AXY C;  3X0U A;  4DX0 A;  4DAU A;  4W8J A;  4DHU A;  4JDD A;  2BQ0 A;  3M50 A;  4Y5I A;  4IHL A;  2C23 A;  4DHQ A;  1O9D A;  4O46 A;  2C74 A;  4FL5 A;  5LVZ A;  4F7R A;  5EXA A;  2O98 A;  1W99 A;  5EWZ A;  5F74 A;  4ZDR A;  4MOA A; 
#chains in the Genus database with same CATH homology
 5D3F A;  3P1O A;  3UX0 A;  5LX2 A;  1A38 A;  4DHN A;  3P1Q A;  4FJ3 A;  4QLI A;  3SMN A;  5LHO A;  5LU2 A;  3SML A;  5LU1 A;  4HKC A;  3IQV A;  2O02 A;  3SMK A;  2B05 A;  4DHP A;  2C63 A;  3MHR A;  4N7Y A;  5BY9 A;  4DHR A;  1QJB A;  4DHS A;  4BG6 A;  3RDH A;  1O9E A;  3EFZ A;  4WRQ A;  4N7G A;  2NPM A;  1A37 A;  3CU8 A;  3UZD A;  3IQJ A;  1O9C A;  1YZ5 A;  3M51 A;  2V7D A;  3E6Y A;  4ZQ0 A;  1QJA A;  3P1N A;  3P1S A;  1YWT A;  3T0M A;  1IB1 A;  4GNT A;  3LW1 A;  3U9X A;  4E2E A;  5D2D A;  2WH0 A;  5IQP A;  4Y3B A;  4N84 A;  4FR3 A;  4DHT A;  2BR9 A;  4DNK A;  5HF3 A;  3SMM A;  3NKX A;  1A4O A;  2O8P A;  4JC3 A;  4IEA A;  3UAL A;  4DHM A;  3UBW A;  5D3E A;  3SMO A;  5J31 A;  3IQU A;  2C1N A;  1O9F A;  3P1P A;  3SPR A;  5BTV A;  3P1R A;  4J6S A;  4DHO A;  3T0L A;  4Y32 A;  4DAT A;  2BTP A;  3O8I A;  2C1J A;  3SP5 A;  3AXY C;  4DX0 A;  4DAU A;  4DHU A;  4JDD A;  2BQ0 A;  3M50 A;  4Y5I A;  4IHL A;  2C23 A;  4DHQ A;  1O9D A;  4O46 A;  2C74 A;  4FL5 A;  5LVZ A;  4F7R A;  5EXA A;  2O98 A;  5EWZ A;  5F74 A;  4ZDR A; 
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