3U9XA

Covalent attachment of pyridoxal-phosphate derivatives to 14-3-3 proteins
Total Genus 99

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
99
sequence length
235
structure length
226
Chain Sequence
AMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (107-110)AH4 (79-104)AH5 (114-134)AH6 (137-161)AH8 (187-203)AH9 (210-230)EMPTYTI2 (163-166)AH7 (167-183)AH1 (3-16)AH3 (39-70)AH2 (19-32)TIV1 (104-107)3H2 (205-207)Updating...
connected with : NaN
molecule tags Signaling protein/inhibitor
source organism Homo sapiens
publication title Covalent attachment of pyridoxal-phosphate derivatives to 14-3-3 proteins.
pubmed doi rcsb
molecule keywords 14-3-3 protein sigma
total genus 99
structure length 226
sequence length 235
ec nomenclature
pdb deposition date 2011-10-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 3u9xA00
5D3EA 2V7DA 4DHPA 3CU8A 3IQUA 4WRQA 5EWZA 4FR3A 5F74A 4Y32A 4BG6A 5LU1A 5BY9A 1IB1A 4DHQA 3SMNA 4DHMA 5HF3A 3EFZA 4N84A 4DHTA 4F7RA 4DX0A 4JC3A 4O46A 4N7YA 1YWTA 3P1PA 4DHUA 1QJBA 2C1JA 4DHNA 4DHSA 1A37A 2C63A 3SMKA 3RDHA 4DATA 2WH0A 4ZDRA 5D2DA 1O9EA 4J6SA 1O9DA 3LW1A 1A4OA 5LU2A 3P1QA 2O98A 3SMLA 3IQVA 3P1NA 4HKCA 1A38A 5LX2A 5EXAA 2C74A 2O02A 2BR9A 4N7GA 3O8IA 3IQJA 3UALA 5J31A 3T0MA 4Y3BA 5BTVA 1QJAA 4JDDA 2C1NA 4FJ3A 1O9FA 4DHOA 3P1SA 4DNKA 3U9XA 3P1RA 5LVZA 2O8PA 3UX0A 4ZQ0A 5D3FA 3T0LA 1O9CA 3SPRA 3MHRA 4DHRA 1YZ5A 3UZDA 2B05A 4IEAA 3P1OA 3SP5A 4Y5IA 5IQPA 2BQ0A 4E2EA 2C23A 4IHLA 2NPMA 3AXYC 3M51A 4QLIA 2BTPA 4GNTA 3E6YA 3M50A 4DAUA 5LHOA 3SMMA 3NKXA 3SMOA 3UBWA 4FL5A
chains in the Genus database with same CATH superfamily
5D3EA 1JI6A 2V7DA 4DHPA 3CU8A 3IQUA 4WRQA 5EWZA 4FR3A 5F74A 4Y32A 4BG6A 3CQGA 5LU1A 5BY9A 1IB1A 4DHQA 3SMNA 1URJA 1DLCA 4DHMA 1S2XA 5HF3A 3EFZA 4N84A 4DHTA 4F7RA 3SMOA 4JC3A 4DX0A 4O46A 4N7YA 1YWTA 3P1PA 4DHUA 1QJBA 2C1JA 4QX3A 4DHNA 3CQCA 4DHSA 1A37A 2C63A 4QX2A 3SMKA 3RDHA 4DATA 2WH0A 4ZDRA 4ARXA 5D2DA 1O9EA 4J6SA 1O9DA 3LW1A 1A4OA 5LU2A 3P1QA 2O98A 3SMLA 3IQVA 3P1NA 4HKCA 1A38A 5LX2A 5EXAA 4QX0A 2C74A 2O02A 2BR9A 4N7GA 3O8IA 3IQJA 3UALA 5J31A 3T0MA 3X0UA 4Y3BA 5BTVA 1QJAA 4JDDA 2C1NA 1CIYA 4FJ3A 1O9FA 4W8JA 4ARYA 3ZHEB 4DHOA 3P1SA 4DNKA 3U9XA 3P1RA 5LVZA 4D8MA 2O8PA 3UX0A 4ZQ0A 5D3FA 1I5PA 3T0LA 2C9KA 1O9CA 3SPRA 3MHRA 4DHRA 1YZ5A 3I4RA 3UZDA 2B05A 4IEAA 3P1OA 3SP5A 4Y5IA 5IQPA 2BQ0A 4E2EA 2C23A 4IHLA 2NPMA 3EB7A 3AXYC 3M51A 4QLIA 2BTPA 4MOAA 4GNTA 4QX1A 3E6YA 3M50A 4DAUA 5LHOA 3SMMA 3NKXA 1W99A 3UBWA 4FL5A
chains in the Genus database with same CATH topology
5D3EA 2V7DA 4DHPA 3CU8A 3IQUA 4WRQA 5EWZA 4FR3A 5F74A 4Y32A 4BG6A 5LU1A 5BY9A 1IB1A 4DHQA 3SMNA 4DHMA 5HF3A 3EFZA 4N84A 4DHTA 4F7RA 4DX0A 4JC3A 4O46A 4N7YA 1YWTA 3P1PA 4DHUA 1QJBA 2C1JA 4DHNA 4DHSA 1A37A 2C63A 3SMKA 3RDHA 4DATA 2WH0A 4ZDRA 5D2DA 1O9EA 4J6SA 1O9DA 3LW1A 1A4OA 5LU2A 3P1QA 2O98A 3SMLA 3IQVA 3P1NA 4HKCA 1A38A 5LX2A 5EXAA 2C74A 2O02A 2BR9A 4N7GA 3O8IA 3IQJA 3UALA 5J31A 3T0MA 4Y3BA 5BTVA 1QJAA 4JDDA 2C1NA 4FJ3A 1O9FA 4DHOA 3P1SA 4DNKA 3U9XA 3P1RA 5LVZA 2O8PA 3UX0A 4ZQ0A 5D3FA 3T0LA 1O9CA 3SPRA 3MHRA 4DHRA 1YZ5A 3UZDA 2B05A 4IEAA 3P1OA 3SP5A 4Y5IA 5IQPA 2BQ0A 4E2EA 2C23A 4IHLA 2NPMA 3AXYC 3M51A 4QLIA 2BTPA 4GNTA 3E6YA 3M50A 4DAUA 5LHOA 3SMMA 3NKXA 3SMOA 3UBWA 4FL5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D3E A;  2V7D A;  4DHP A;  3CU8 A;  3IQU A;  4WRQ A;  5EWZ A;  4FR3 A;  5F74 A;  4Y32 A;  4BG6 A;  5LU1 A;  5BY9 A;  1IB1 A;  4DHQ A;  3SMN A;  4DHM A;  5HF3 A;  3EFZ A;  4N84 A;  4DHT A;  4F7R A;  4DX0 A;  4JC3 A;  4O46 A;  4N7Y A;  1YWT A;  3P1P A;  4DHU A;  1QJB A;  2C1J A;  4DHN A;  4DHS A;  1A37 A;  2C63 A;  3SMK A;  3RDH A;  4DAT A;  2WH0 A;  4ZDR A;  5D2D A;  1O9E A;  4J6S A;  1O9D A;  3LW1 A;  1A4O A;  5LU2 A;  3P1Q A;  2O98 A;  3SML A;  3IQV A;  3P1N A;  4HKC A;  1A38 A;  5LX2 A;  5EXA A;  2C74 A;  2O02 A;  2BR9 A;  4N7G A;  3O8I A;  3IQJ A;  3UAL A;  5J31 A;  3T0M A;  4Y3B A;  5BTV A;  1QJA A;  4JDD A;  2C1N A;  4FJ3 A;  1O9F A;  4DHO A;  3P1S A;  4DNK A;  3U9X A;  3P1R A;  5LVZ A;  2O8P A;  3UX0 A;  4ZQ0 A;  5D3F A;  3T0L A;  1O9C A;  3SPR A;  3MHR A;  4DHR A;  1YZ5 A;  3UZD A;  2B05 A;  4IEA A;  3P1O A;  3SP5 A;  4Y5I A;  5IQP A;  2BQ0 A;  4E2E A;  2C23 A;  4IHL A;  2NPM A;  3AXY C;  3M51 A;  4QLI A;  2BTP A;  4GNT A;  3E6Y A;  3M50 A;  4DAU A;  5LHO A;  3SMM A;  3NKX A;  3SMO A;  3UBW A;  4FL5 A; 
#chains in the Genus database with same CATH topology
 5D3E A;  1JI6 A;  2V7D A;  4DHP A;  3CU8 A;  3IQU A;  4WRQ A;  5EWZ A;  4FR3 A;  5F74 A;  4Y32 A;  4BG6 A;  3CQG A;  5LU1 A;  5BY9 A;  1IB1 A;  4DHQ A;  3SMN A;  1URJ A;  1DLC A;  4DHM A;  1S2X A;  5HF3 A;  3EFZ A;  4N84 A;  4DHT A;  4F7R A;  3SMO A;  4JC3 A;  4DX0 A;  4O46 A;  4N7Y A;  1YWT A;  3P1P A;  4DHU A;  1QJB A;  2C1J A;  4QX3 A;  4DHN A;  3CQC A;  4DHS A;  1A37 A;  2C63 A;  4QX2 A;  3SMK A;  3RDH A;  4DAT A;  2WH0 A;  4ZDR A;  4ARX A;  5D2D A;  1O9E A;  4J6S A;  1O9D A;  3LW1 A;  1A4O A;  5LU2 A;  3P1Q A;  2O98 A;  3SML A;  3IQV A;  3P1N A;  4HKC A;  1A38 A;  5LX2 A;  5EXA A;  4QX0 A;  2C74 A;  2O02 A;  2BR9 A;  4N7G A;  3O8I A;  3IQJ A;  3UAL A;  5J31 A;  3T0M A;  3X0U A;  4Y3B A;  5BTV A;  1QJA A;  4JDD A;  2C1N A;  1CIY A;  4FJ3 A;  1O9F A;  4W8J A;  4ARY A;  3ZHE B;  4DHO A;  3P1S A;  4DNK A;  3U9X A;  3P1R A;  5LVZ A;  4D8M A;  2O8P A;  3UX0 A;  4ZQ0 A;  5D3F A;  1I5P A;  3T0L A;  2C9K A;  1O9C A;  3SPR A;  3MHR A;  4DHR A;  1YZ5 A;  3I4R A;  3UZD A;  2B05 A;  4IEA A;  3P1O A;  3SP5 A;  4Y5I A;  5IQP A;  2BQ0 A;  4E2E A;  2C23 A;  4IHL A;  2NPM A;  3EB7 A;  3AXY C;  3M51 A;  4QLI A;  2BTP A;  4MOA A;  4GNT A;  4QX1 A;  3E6Y A;  3M50 A;  4DAU A;  5LHO A;  3SMM A;  3NKX A;  1W99 A;  3UBW A;  4FL5 A; 
#chains in the Genus database with same CATH homology
 5D3E A;  2V7D A;  4DHP A;  3CU8 A;  3IQU A;  4WRQ A;  5EWZ A;  4FR3 A;  5F74 A;  4Y32 A;  4BG6 A;  5LU1 A;  5BY9 A;  1IB1 A;  4DHQ A;  3SMN A;  4DHM A;  5HF3 A;  3EFZ A;  4N84 A;  4DHT A;  4F7R A;  4DX0 A;  4JC3 A;  4O46 A;  4N7Y A;  1YWT A;  3P1P A;  4DHU A;  1QJB A;  2C1J A;  4DHN A;  4DHS A;  1A37 A;  2C63 A;  3SMK A;  3RDH A;  4DAT A;  2WH0 A;  4ZDR A;  5D2D A;  1O9E A;  4J6S A;  1O9D A;  3LW1 A;  1A4O A;  5LU2 A;  3P1Q A;  2O98 A;  3SML A;  3IQV A;  3P1N A;  4HKC A;  1A38 A;  5LX2 A;  5EXA A;  2C74 A;  2O02 A;  2BR9 A;  4N7G A;  3O8I A;  3IQJ A;  3UAL A;  5J31 A;  3T0M A;  4Y3B A;  5BTV A;  1QJA A;  4JDD A;  2C1N A;  4FJ3 A;  1O9F A;  4DHO A;  3P1S A;  4DNK A;  3U9X A;  3P1R A;  5LVZ A;  2O8P A;  3UX0 A;  4ZQ0 A;  5D3F A;  3T0L A;  1O9C A;  3SPR A;  3MHR A;  4DHR A;  1YZ5 A;  3UZD A;  2B05 A;  4IEA A;  3P1O A;  3SP5 A;  4Y5I A;  5IQP A;  2BQ0 A;  4E2E A;  2C23 A;  4IHL A;  2NPM A;  3AXY C;  3M51 A;  4QLI A;  2BTP A;  4GNT A;  3E6Y A;  3M50 A;  4DAU A;  5LHO A;  3SMM A;  3NKX A;  3SMO A;  3UBW A;  4FL5 A; 
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