4FL5A

Crystal structure of human 14-3-3 sigma in complex with a tau-protein peptide surrounding ps214
Total Genus 100

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
236
structure length
229
Chain Sequence
GAMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH5 (114-134)EMPTYAH7 (167-184)AH6 (137-161)TI3 (163-166)AH9 (210-230)AH1 (3-16)AH3 (39-70)AH2 (19-31)AH4 (79-107)AH8 (187-203)3H1 (205-207)TIV1 (109-112)Updating...
connected with : NaN
molecule tags Signaling protein
source organism Homo sapiens
publication title Involvement of 14-3-3 in tubulin instability and impaired axon development is mediated by Tau.
pubmed doi rcsb
molecule keywords 14-3-3 protein sigma
total genus 100
structure length 229
sequence length 236
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-06-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 4fl5A00
4QLIA 5BTVA 2V7DA 1A38A 3P1NA 2O8PA 3IQUA 2C63A 3RDHA 5D2DA 3U9XA 3NKXA 5EWZA 2C74A 3MHRA 4GNTA 3UX0A 5D3EA 2C23A 2BTPA 1O9EA 4DHRA 4F7RA 3E6YA 4DHPA 3O8IA 4DHNA 4DHTA 4DAUA 5BY9A 4FR3A 5LU1A 2BQ0A 3T0LA 1YZ5A 5IQPA 3AXYC 3UBWA 3P1SA 3IQVA 1A37A 1QJBA 3SMNA 1QJAA 5LU2A 3SMOA 3IQJA 4JC3A 5LVZA 4WRQA 4DATA 3P1PA 4DHOA 4N84A 5LX2A 4JDDA 1A4OA 4BG6A 5LHOA 3LW1A 3T0MA 4DHQA 3P1OA 4IHLA 4N7GA 3P1RA 4O46A 4FJ3A 1O9DA 4DHSA 3P1QA 2NPMA 3UZDA 4HKCA 4J6SA 5F74A 4N7YA 1O9CA 4E2EA 4Y3BA 2WH0A 4DX0A 5J31A 4IEAA 4FL5A 4DHMA 2C1NA 3SP5A 4DHUA 3UALA 5EXAA 4Y5IA 3SMLA 3CU8A 4ZQ0A 5HF3A 3SPRA 4DNKA 3M50A 3EFZA 1YWTA 2C1JA 3M51A 3SMMA 1IB1A 4Y32A 4ZDRA 2O02A 3SMKA 2BR9A 2O98A 1O9FA 5D3FA 2B05A
chains in the Genus database with same CATH superfamily
4QLIA 4QX3A 4QX1A 5BTVA 2V7DA 1A38A 4W8JA 3P1NA 2O8PA 3IQUA 2C63A 3RDHA 5D2DA 3U9XA 3NKXA 5EWZA 2C74A 3MHRA 4GNTA 1I5PA 3UX0A 5D3EA 2C23A 2BTPA 1O9EA 4DHRA 4F7RA 4QX2A 3E6YA 4DHPA 3O8IA 4DHNA 4DHTA 4DAUA 5BY9A 4D8MA 4FR3A 5LU1A 2BQ0A 3T0LA 1YZ5A 5IQPA 3AXYC 4ARYA 3ZHEB 3UBWA 3P1SA 3IQVA 1A37A 1QJBA 3SMNA 1QJAA 5LU2A 3SMOA 3IQJA 4JC3A 2C9KA 5LVZA 4WRQA 4DATA 3P1PA 4DHOA 4N84A 5LX2A 1CIYA 4JDDA 1A4OA 4BG6A 5LHOA 3LW1A 3T0MA 1JI6A 4DHQA 3P1OA 4IHLA 4N7GA 3P1RA 4O46A 4FJ3A 1O9DA 4DHSA 3P1QA 2NPMA 3UZDA 4HKCA 4J6SA 5F74A 4N7YA 1O9CA 4E2EA 4Y3BA 2WH0A 4DX0A 5J31A 4IEAA 4FL5A 4DHMA 3X0UA 2C1NA 4ARXA 3SP5A 4DHUA 3UALA 5EXAA 1URJA 4Y5IA 3SMLA 3CU8A 1DLCA 4ZQ0A 1W99A 5HF3A 3SPRA 1S2XA 4DNKA 3M50A 3EFZA 3EB7A 1YWTA 2C1JA 3I4RA 3CQCA 3M51A 4MOAA 4QX0A 3SMMA 1IB1A 4Y32A 4ZDRA 2O02A 3SMKA 2BR9A 3CQGA 2O98A 1O9FA 5D3FA 2B05A
chains in the Genus database with same CATH topology
4QLIA 5BTVA 2V7DA 1A38A 3P1NA 2O8PA 3IQUA 2C63A 3RDHA 5D2DA 3U9XA 3NKXA 5EWZA 2C74A 3MHRA 4GNTA 3UX0A 5D3EA 2C23A 2BTPA 1O9EA 4DHRA 4F7RA 3E6YA 4DHPA 3O8IA 4DHNA 4DHTA 4DAUA 5BY9A 4FR3A 5LU1A 2BQ0A 3T0LA 1YZ5A 5IQPA 3AXYC 3UBWA 3P1SA 3IQVA 1A37A 1QJBA 3SMNA 1QJAA 5LU2A 3SMOA 3IQJA 4JC3A 5LVZA 4WRQA 4DATA 3P1PA 4DHOA 4N84A 5LX2A 4JDDA 1A4OA 4BG6A 5LHOA 3LW1A 3T0MA 4DHQA 3P1OA 4IHLA 4N7GA 3P1RA 4O46A 4FJ3A 1O9DA 4DHSA 3P1QA 2NPMA 3UZDA 4HKCA 4J6SA 5F74A 4N7YA 1O9CA 4E2EA 4Y3BA 2WH0A 4DX0A 5J31A 4IEAA 4FL5A 4DHMA 2C1NA 3SP5A 4DHUA 3UALA 5EXAA 4Y5IA 3SMLA 3CU8A 4ZQ0A 5HF3A 3SPRA 4DNKA 3M50A 3EFZA 1YWTA 2C1JA 3M51A 3SMMA 1IB1A 4Y32A 4ZDRA 2O02A 3SMKA 2BR9A 2O98A 1O9FA 5D3FA 2B05A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QLI A;  5BTV A;  2V7D A;  1A38 A;  3P1N A;  2O8P A;  3IQU A;  2C63 A;  3RDH A;  5D2D A;  3U9X A;  3NKX A;  5EWZ A;  2C74 A;  3MHR A;  4GNT A;  3UX0 A;  5D3E A;  2C23 A;  2BTP A;  1O9E A;  4DHR A;  4F7R A;  3E6Y A;  4DHP A;  3O8I A;  4DHN A;  4DHT A;  4DAU A;  5BY9 A;  4FR3 A;  5LU1 A;  2BQ0 A;  3T0L A;  1YZ5 A;  5IQP A;  3AXY C;  3UBW A;  3P1S A;  3IQV A;  1A37 A;  1QJB A;  3SMN A;  1QJA A;  5LU2 A;  3SMO A;  3IQJ A;  4JC3 A;  5LVZ A;  4WRQ A;  4DAT A;  3P1P A;  4DHO A;  4N84 A;  5LX2 A;  4JDD A;  1A4O A;  4BG6 A;  5LHO A;  3LW1 A;  3T0M A;  4DHQ A;  3P1O A;  4IHL A;  4N7G A;  3P1R A;  4O46 A;  4FJ3 A;  1O9D A;  4DHS A;  3P1Q A;  2NPM A;  3UZD A;  4HKC A;  4J6S A;  5F74 A;  4N7Y A;  1O9C A;  4E2E A;  4Y3B A;  2WH0 A;  4DX0 A;  5J31 A;  4IEA A;  4FL5 A;  4DHM A;  2C1N A;  3SP5 A;  4DHU A;  3UAL A;  5EXA A;  4Y5I A;  3SML A;  3CU8 A;  4ZQ0 A;  5HF3 A;  3SPR A;  4DNK A;  3M50 A;  3EFZ A;  1YWT A;  2C1J A;  3M51 A;  3SMM A;  1IB1 A;  4Y32 A;  4ZDR A;  2O02 A;  3SMK A;  2BR9 A;  2O98 A;  1O9F A;  5D3F A;  2B05 A; 
#chains in the Genus database with same CATH topology
 4QLI A;  4QX3 A;  4QX1 A;  5BTV A;  2V7D A;  1A38 A;  4W8J A;  3P1N A;  2O8P A;  3IQU A;  2C63 A;  3RDH A;  5D2D A;  3U9X A;  3NKX A;  5EWZ A;  2C74 A;  3MHR A;  4GNT A;  1I5P A;  3UX0 A;  5D3E A;  2C23 A;  2BTP A;  1O9E A;  4DHR A;  4F7R A;  4QX2 A;  3E6Y A;  4DHP A;  3O8I A;  4DHN A;  4DHT A;  4DAU A;  5BY9 A;  4D8M A;  4FR3 A;  5LU1 A;  2BQ0 A;  3T0L A;  1YZ5 A;  5IQP A;  3AXY C;  4ARY A;  3ZHE B;  3UBW A;  3P1S A;  3IQV A;  1A37 A;  1QJB A;  3SMN A;  1QJA A;  5LU2 A;  3SMO A;  3IQJ A;  4JC3 A;  2C9K A;  5LVZ A;  4WRQ A;  4DAT A;  3P1P A;  4DHO A;  4N84 A;  5LX2 A;  1CIY A;  4JDD A;  1A4O A;  4BG6 A;  5LHO A;  3LW1 A;  3T0M A;  1JI6 A;  4DHQ A;  3P1O A;  4IHL A;  4N7G A;  3P1R A;  4O46 A;  4FJ3 A;  1O9D A;  4DHS A;  3P1Q A;  2NPM A;  3UZD A;  4HKC A;  4J6S A;  5F74 A;  4N7Y A;  1O9C A;  4E2E A;  4Y3B A;  2WH0 A;  4DX0 A;  5J31 A;  4IEA A;  4FL5 A;  4DHM A;  3X0U A;  2C1N A;  4ARX A;  3SP5 A;  4DHU A;  3UAL A;  5EXA A;  1URJ A;  4Y5I A;  3SML A;  3CU8 A;  1DLC A;  4ZQ0 A;  1W99 A;  5HF3 A;  3SPR A;  1S2X A;  4DNK A;  3M50 A;  3EFZ A;  3EB7 A;  1YWT A;  2C1J A;  3I4R A;  3CQC A;  3M51 A;  4MOA A;  4QX0 A;  3SMM A;  1IB1 A;  4Y32 A;  4ZDR A;  2O02 A;  3SMK A;  2BR9 A;  3CQG A;  2O98 A;  1O9F A;  5D3F A;  2B05 A; 
#chains in the Genus database with same CATH homology
 4QLI A;  5BTV A;  2V7D A;  1A38 A;  3P1N A;  2O8P A;  3IQU A;  2C63 A;  3RDH A;  5D2D A;  3U9X A;  3NKX A;  5EWZ A;  2C74 A;  3MHR A;  4GNT A;  3UX0 A;  5D3E A;  2C23 A;  2BTP A;  1O9E A;  4DHR A;  4F7R A;  3E6Y A;  4DHP A;  3O8I A;  4DHN A;  4DHT A;  4DAU A;  5BY9 A;  4FR3 A;  5LU1 A;  2BQ0 A;  3T0L A;  1YZ5 A;  5IQP A;  3AXY C;  3UBW A;  3P1S A;  3IQV A;  1A37 A;  1QJB A;  3SMN A;  1QJA A;  5LU2 A;  3SMO A;  3IQJ A;  4JC3 A;  5LVZ A;  4WRQ A;  4DAT A;  3P1P A;  4DHO A;  4N84 A;  5LX2 A;  4JDD A;  1A4O A;  4BG6 A;  5LHO A;  3LW1 A;  3T0M A;  4DHQ A;  3P1O A;  4IHL A;  4N7G A;  3P1R A;  4O46 A;  4FJ3 A;  1O9D A;  4DHS A;  3P1Q A;  2NPM A;  3UZD A;  4HKC A;  4J6S A;  5F74 A;  4N7Y A;  1O9C A;  4E2E A;  4Y3B A;  2WH0 A;  4DX0 A;  5J31 A;  4IEA A;  4FL5 A;  4DHM A;  2C1N A;  3SP5 A;  4DHU A;  3UAL A;  5EXA A;  4Y5I A;  3SML A;  3CU8 A;  4ZQ0 A;  5HF3 A;  3SPR A;  4DNK A;  3M50 A;  3EFZ A;  1YWT A;  2C1J A;  3M51 A;  3SMM A;  1IB1 A;  4Y32 A;  4ZDR A;  2O02 A;  3SMK A;  2BR9 A;  2O98 A;  1O9F A;  5D3F A;  2B05 A; 
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