5BY9A

The crystal structure of polyglycilated 14-3-3 protein from giardia intestinalis
Total Genus 88

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
236
structure length
236
Chain Sequence
AEAFTREDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRIVSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVFYYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFYYEILASPDRACELARKAFDAAITDLDKLTEESYKDSTLIMQLLRDNLNLWVT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (114-116)AH2 (23-35)AH3 (42-75)AH5 (120-139)AH4 (81-112)TVIII1 (76-79)EMPTYAH6 (144-165)AH7 (172-188)TI1 (168-171)TI2 (215-218)AH9 (218-234)AH8 (192-213)AH1 (7-20)Updating...
connected with : NaN
molecule tags Signaling protein
source organism Giardia intestinalis
publication title Molecular Dynamics Simulations and Structural Analysis of Giardia duodenalis 14-3-3 Protein-Protein Interactions.
pubmed doi rcsb
molecule keywords 14-3-3 protein
total genus 88
structure length 236
sequence length 236
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2015-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 5by9A00
3EFZA 1IB1A 5IQPA 4DAUA 2O02A 2C1JA 2BR9A 2C1NA 3SMNA 3RDHA 4HKCA 3E6YA 3SMOA 4E2EA 1O9CA 2BQ0A 3P1QA 1O9EA 3IQJA 4DHSA 1O9FA 5F74A 1QJBA 3SP5A 5D3EA 3SMMA 2WH0A 4DHRA 1O9DA 3UBWA 4DHNA 5LU2A 3M50A 1A37A 5BTVA 5LU1A 3IQVA 4DHQA 1A4OA 3T0MA 4Y5IA 4IHLA 4IEAA 2C74A 2BTPA 4N7YA 2NPMA 3SPRA 5D3FA 4ZDRA 3AXYC 3MHRA 4O46A 5LX2A 5EWZA 4FL5A 1QJAA 2C63A 4WRQA 4N7GA 3O8IA 3UZDA 4DHMA 5LVZA 5EXAA 4DHPA 2C23A 3U9XA 4GNTA 3M51A 5HF3A 4DHUA 5LHOA 4JC3A 4JDDA 2V7DA 1YWTA 4N84A 3UX0A 4FJ3A 4DX0A 3LW1A 4QLIA 3P1NA 3SMLA 4ZQ0A 4BG6A 3CU8A 4J6SA 3P1RA 5BY9A 1A38A 2O8PA 3SMKA 2B05A 3P1OA 3P1SA 5D2DA 4Y3BA 4DNKA 4DHTA 2O98A 4F7RA 1YZ5A 3T0LA 3IQUA 3UALA 4Y32A 5J31A 3NKXA 3P1PA 4FR3A 4DATA 4DHOA
chains in the Genus database with same CATH superfamily
3EFZA 1IB1A 5IQPA 4DAUA 2O02A 2C1JA 2BR9A 2C1NA 3SMNA 4ARXA 3RDHA 4HKCA 3E6YA 3SMOA 4E2EA 1O9CA 4MOAA 4D8MA 2BQ0A 3P1QA 1O9EA 3IQJA 4DHSA 1O9FA 3ZHEB 4QX3A 5F74A 1QJBA 3SP5A 5D3EA 3SMMA 2WH0A 4DHRA 1O9DA 4W8JA 3UBWA 4DHNA 5LU2A 3M50A 1A37A 5BTVA 5LU1A 3IQVA 4DHQA 1A4OA 3T0MA 4Y5IA 4IHLA 4IEAA 2C74A 2BTPA 4N7YA 3CQGA 2NPMA 3SPRA 5D3FA 4ZDRA 1CIYA 3AXYC 3CQCA 3MHRA 4O46A 5LX2A 5EWZA 4FL5A 1I5PA 1QJAA 2C63A 4WRQA 4N7GA 3X0UA 3O8IA 3UZDA 4DHMA 5LVZA 5EXAA 1JI6A 4DHPA 2C23A 3U9XA 4GNTA 3M51A 5HF3A 4DHUA 5LHOA 4JC3A 4JDDA 2V7DA 1YWTA 4N84A 3UX0A 4FJ3A 4DX0A 3LW1A 1DLCA 2C9KA 4QLIA 3P1NA 3SMLA 1URJA 4ZQ0A 1W99A 4BG6A 3CU8A 4J6SA 3P1RA 4ARYA 3EB7A 5BY9A 1A38A 2O8PA 3SMKA 2B05A 4QX2A 3P1OA 3P1SA 5D2DA 4Y3BA 4DNKA 4DHTA 2O98A 4F7RA 1YZ5A 3T0LA 3IQUA 3UALA 4QX1A 4Y32A 5J31A 3NKXA 3P1PA 3I4RA 4FR3A 4DATA 4QX0A 4DHOA 1S2XA
chains in the Genus database with same CATH topology
3EFZA 1IB1A 5IQPA 4DAUA 2O02A 2C1JA 2BR9A 2C1NA 3SMNA 3RDHA 4HKCA 3E6YA 3SMOA 4E2EA 1O9CA 2BQ0A 3P1QA 1O9EA 3IQJA 4DHSA 1O9FA 5F74A 1QJBA 3SP5A 5D3EA 3SMMA 2WH0A 4DHRA 1O9DA 3UBWA 4DHNA 5LU2A 3M50A 1A37A 5BTVA 5LU1A 3IQVA 4DHQA 1A4OA 3T0MA 4Y5IA 4IHLA 4IEAA 2C74A 2BTPA 4N7YA 2NPMA 3SPRA 5D3FA 4ZDRA 3AXYC 3MHRA 4O46A 5LX2A 5EWZA 4FL5A 1QJAA 2C63A 4WRQA 4N7GA 3O8IA 3UZDA 4DHMA 5LVZA 5EXAA 4DHPA 2C23A 3U9XA 4GNTA 3M51A 5HF3A 4DHUA 5LHOA 4JC3A 4JDDA 2V7DA 1YWTA 4N84A 3UX0A 4FJ3A 4DX0A 3LW1A 4QLIA 3P1NA 3SMLA 4ZQ0A 4BG6A 3CU8A 4J6SA 3P1RA 5BY9A 1A38A 2O8PA 3SMKA 2B05A 3P1OA 3P1SA 5D2DA 4Y3BA 4DNKA 4DHTA 2O98A 4F7RA 1YZ5A 3T0LA 3IQUA 3UALA 4Y32A 5J31A 3NKXA 3P1PA 4FR3A 4DATA 4DHOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EFZ A;  1IB1 A;  5IQP A;  4DAU A;  2O02 A;  2C1J A;  2BR9 A;  2C1N A;  3SMN A;  3RDH A;  4HKC A;  3E6Y A;  3SMO A;  4E2E A;  1O9C A;  2BQ0 A;  3P1Q A;  1O9E A;  3IQJ A;  4DHS A;  1O9F A;  5F74 A;  1QJB A;  3SP5 A;  5D3E A;  3SMM A;  2WH0 A;  4DHR A;  1O9D A;  3UBW A;  4DHN A;  5LU2 A;  3M50 A;  1A37 A;  5BTV A;  5LU1 A;  3IQV A;  4DHQ A;  1A4O A;  3T0M A;  4Y5I A;  4IHL A;  4IEA A;  2C74 A;  2BTP A;  4N7Y A;  2NPM A;  3SPR A;  5D3F A;  4ZDR A;  3AXY C;  3MHR A;  4O46 A;  5LX2 A;  5EWZ A;  4FL5 A;  1QJA A;  2C63 A;  4WRQ A;  4N7G A;  3O8I A;  3UZD A;  4DHM A;  5LVZ A;  5EXA A;  4DHP A;  2C23 A;  3U9X A;  4GNT A;  3M51 A;  5HF3 A;  4DHU A;  5LHO A;  4JC3 A;  4JDD A;  2V7D A;  1YWT A;  4N84 A;  3UX0 A;  4FJ3 A;  4DX0 A;  3LW1 A;  4QLI A;  3P1N A;  3SML A;  4ZQ0 A;  4BG6 A;  3CU8 A;  4J6S A;  3P1R A;  5BY9 A;  1A38 A;  2O8P A;  3SMK A;  2B05 A;  3P1O A;  3P1S A;  5D2D A;  4Y3B A;  4DNK A;  4DHT A;  2O98 A;  4F7R A;  1YZ5 A;  3T0L A;  3IQU A;  3UAL A;  4Y32 A;  5J31 A;  3NKX A;  3P1P A;  4FR3 A;  4DAT A;  4DHO A; 
#chains in the Genus database with same CATH topology
 3EFZ A;  1IB1 A;  5IQP A;  4DAU A;  2O02 A;  2C1J A;  2BR9 A;  2C1N A;  3SMN A;  4ARX A;  3RDH A;  4HKC A;  3E6Y A;  3SMO A;  4E2E A;  1O9C A;  4MOA A;  4D8M A;  2BQ0 A;  3P1Q A;  1O9E A;  3IQJ A;  4DHS A;  1O9F A;  3ZHE B;  4QX3 A;  5F74 A;  1QJB A;  3SP5 A;  5D3E A;  3SMM A;  2WH0 A;  4DHR A;  1O9D A;  4W8J A;  3UBW A;  4DHN A;  5LU2 A;  3M50 A;  1A37 A;  5BTV A;  5LU1 A;  3IQV A;  4DHQ A;  1A4O A;  3T0M A;  4Y5I A;  4IHL A;  4IEA A;  2C74 A;  2BTP A;  4N7Y A;  3CQG A;  2NPM A;  3SPR A;  5D3F A;  4ZDR A;  1CIY A;  3AXY C;  3CQC A;  3MHR A;  4O46 A;  5LX2 A;  5EWZ A;  4FL5 A;  1I5P A;  1QJA A;  2C63 A;  4WRQ A;  4N7G A;  3X0U A;  3O8I A;  3UZD A;  4DHM A;  5LVZ A;  5EXA A;  1JI6 A;  4DHP A;  2C23 A;  3U9X A;  4GNT A;  3M51 A;  5HF3 A;  4DHU A;  5LHO A;  4JC3 A;  4JDD A;  2V7D A;  1YWT A;  4N84 A;  3UX0 A;  4FJ3 A;  4DX0 A;  3LW1 A;  1DLC A;  2C9K A;  4QLI A;  3P1N A;  3SML A;  1URJ A;  4ZQ0 A;  1W99 A;  4BG6 A;  3CU8 A;  4J6S A;  3P1R A;  4ARY A;  3EB7 A;  5BY9 A;  1A38 A;  2O8P A;  3SMK A;  2B05 A;  4QX2 A;  3P1O A;  3P1S A;  5D2D A;  4Y3B A;  4DNK A;  4DHT A;  2O98 A;  4F7R A;  1YZ5 A;  3T0L A;  3IQU A;  3UAL A;  4QX1 A;  4Y32 A;  5J31 A;  3NKX A;  3P1P A;  3I4R A;  4FR3 A;  4DAT A;  4QX0 A;  4DHO A;  1S2X A; 
#chains in the Genus database with same CATH homology
 3EFZ A;  1IB1 A;  5IQP A;  4DAU A;  2O02 A;  2C1J A;  2BR9 A;  2C1N A;  3SMN A;  3RDH A;  4HKC A;  3E6Y A;  3SMO A;  4E2E A;  1O9C A;  2BQ0 A;  3P1Q A;  1O9E A;  3IQJ A;  4DHS A;  1O9F A;  5F74 A;  1QJB A;  3SP5 A;  5D3E A;  3SMM A;  2WH0 A;  4DHR A;  1O9D A;  3UBW A;  4DHN A;  5LU2 A;  3M50 A;  1A37 A;  5BTV A;  5LU1 A;  3IQV A;  4DHQ A;  1A4O A;  3T0M A;  4Y5I A;  4IHL A;  4IEA A;  2C74 A;  2BTP A;  4N7Y A;  2NPM A;  3SPR A;  5D3F A;  4ZDR A;  3AXY C;  3MHR A;  4O46 A;  5LX2 A;  5EWZ A;  4FL5 A;  1QJA A;  2C63 A;  4WRQ A;  4N7G A;  3O8I A;  3UZD A;  4DHM A;  5LVZ A;  5EXA A;  4DHP A;  2C23 A;  3U9X A;  4GNT A;  3M51 A;  5HF3 A;  4DHU A;  5LHO A;  4JC3 A;  4JDD A;  2V7D A;  1YWT A;  4N84 A;  3UX0 A;  4FJ3 A;  4DX0 A;  3LW1 A;  4QLI A;  3P1N A;  3SML A;  4ZQ0 A;  4BG6 A;  3CU8 A;  4J6S A;  3P1R A;  5BY9 A;  1A38 A;  2O8P A;  3SMK A;  2B05 A;  3P1O A;  3P1S A;  5D2D A;  4Y3B A;  4DNK A;  4DHT A;  2O98 A;  4F7R A;  1YZ5 A;  3T0L A;  3IQU A;  3UAL A;  4Y32 A;  5J31 A;  3NKX A;  3P1P A;  4FR3 A;  4DAT A;  4DHO A; 
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