2RJIA

Malarial eba-175 region vi crystallographic structure reveals a kix-like binding interface
Total Genus 33
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
84
structure length
84
Chain Sequence
DDSTTKELIKKLAEINKCENEISAKYCDHMIHEEIPLKTCTKEKTRNLCCAVSDYCMSYFTYDSEEYYDCTKREFDDPSYTCFR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Protein transport, cell invasion
source organism Plasmodium falciparum
publication title Malarial EBA-175 Region VI Crystallographic Structure Reveals a KIX-Like Binding Interface
pubmed doi rcsb
molecule keywords Erythrocyte binding antigen 175
total genus 33
structure length 84
sequence length 84
chains with identical sequence B
ec nomenclature
pdb deposition date 2007-10-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF11556 EBA-175_VI Erythrocyte binding antigen 175
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1740.170 Mainly Alpha Orthogonal Bundle Rna Polymerase Sigma Factor; Chain: A Rna Polymerase Sigma Factor; Chain: A 2rjiA00
2RJIA
chains in the Genus database with same CATH superfamily
4ZX5A 3RASA 1ONNA 3AU8A 3A06A 3ANLA 1SQMA 4XN9A 4FLSA 3QJXA 5DULA 3UEQA 3FTZA 1R0LA 3FHEA 4XN7A 3B2XA 3B37A 4MKTA 5JAZA 3T0YA 1OR7A 3B7SA 3CZGA 3VVLA 4QMEA 4ZQTA 1K5HA 3HW2A 3U9WA 4ZW5A 2XPYA 1JGIA 3JT1A 4XMZA 4ZX3A 3FU0A 2C82A 3CZLA 3T8VA 1T1RA 3FH7A 4OOFA 4RSYA 2QJ1A 4RVBA 4AR8A 4XMTA 2JCXA 4FLOA 2VLAA 2Y1GA 3FU3A 3FULA 1G5AA 4XN8A 2WZGA 4XMWA 4XMXA 4ZW3A 1H19A 3A14A 4K5NA 2JD2A 1H3LA 4QUOA 2O7GA 3R0IA 4BKXA 4K5LA 4DPRA 4AR9A 5HLTA 5JO0A 4R7LA 3CIAA 4Q4EA 3JSZA 4XNBA 4XN2A 2MAOA 3ANMA 4AICA 3FTUA 3RC8A 4K5MA 3CHQA 3AUAA 5DLLA 2MAPA 1ZS2A 3PUUA 4FCAA 4ARFA 3FTVA 3FUFA 2EGHA 1S46A 3CHPA 3RC3A 1JG9A 2R72A 3FUEA 1Q0HA 2WZFA 4ZW8A 2Y1EA 2PL5A 2C5ZA 4RCVA 4Y6SA 4XNDA 3VVMA 3KEDA 5JBIA 5JMWA 2QVWA 2ZXGA 4QIRA 5JNLA 1RP3A 1HS6A 3Q44A 2GTQA 2R70A 1X3WA 3ZHZA 3B3BA 2VJ8A 3FUNA 4XN5A 1Q0QA 1MW2A 1JVSA 4J3BA 4OOEA 1MW3A 4A03A 1SG7A 3FUJA 3B34A 3ANNA 4FLRA 3FU6A 3Q43A 2JCYA 3CHSA 3FUDA 2JV7A 4L2LA 4XN4A 2HPTA 5JC1A 4LUPA 1R0KA 1MW0A 3EBHA 4GAAA 4ZQEA 2HPOA 4K5OA 4ZX4A 4XO5A 3FH5A 2JCVA 4FLQA 3ZHXA 2Y1CA 4Y67A 3EBIA 3WQSB 3B7TA 3B2PA 4ZW7A 3WQQA 4ZW6A 3FUHA 2Y1DA 4QPEA 3B7RL 4Q4IA 2PUSA 1MW1A 3AU9A 3FUKA 3CHRA 5FWQA 1ONOA 2PGGA 2JD0A 3CXBA 4ZN6A 4R5VA 1X3ZA 2JD1A 1ONPA 2FFLA 2Y1FA 2R59A 3B7UX 2A7OA 2B61A 2DQMA 1Q0LA 3IIEA 4ZQGA 5DYFA 4KP7A 3ZI0A 1MVYA 2DQ6A 3FTXA 4XO4A 1GW6A 3UERA 4R5TA 4NQWA 4ZQHA 4R5XA 4AR1A 4AYSA 4MS6A 5HNHA 3FUMA 2XQ0A 3EBGA 3FU5A 2WPGA 3FTYA 3WQRA 3UCQA 4XMVA 3CZEA 1SC5A 4QHPA 1T1SA 4XNAA 3CHOA 4K5PA 3CZKA 5AENA 4ZQFA 3FTWA 4JNDA 5EV7A 4PW4A 4PVBA 5BPPA 2RJIA 3FTSA 4ZX6A 2XPZA 4XO3A 5JMPA 4Y6PA 4XMUA 5HNFA 4XN1A 4Y6RA 4X2UA 3FH8A 4PU2A 3ZHYA 4CXFA 4GAEA 3FUIA
chains in the Genus database with same CATH topology
4ZX5A 3RASA 1ONNA 3AU8A 3A06A 3ANLA 1SQMA 4XN9A 4FLSA 3QJXA 5DULA 3UEQA 3FTZA 1R0LA 3FHEA 4XN7A 3B2XA 3B37A 4MKTA 5JAZA 3T0YA 1OR7A 3B7SA 3CZGA 3VVLA 4QMEA 4ZQTA 1K5HA 3U9WA 4ZW5A 2XPYA 1JGIA 3JT1A 4XMZA 4ZX3A 3FU0A 2C82A 3CZLA 3T8VA 1T1RA 3FH7A 4OOFA 4RSYA 2QJ1A 4RVBA 4AR8A 4XMTA 2JCXA 4FLOA 2VLAA 2Y1GA 3FU3A 3FULA 1G5AA 4XN8A 2WZGA 4XMWA 4XMXA 4ZW3A 1H19A 3A14A 4K5NA 2JD2A 1H3LA 4QUOA 2O7GA 3R0IA 4BKXA 4K5LA 4DPRA 4AR9A 5HLTA 5JO0A 4R7LA 3CIAA 4Q4EA 3JSZA 4XNBA 4XN2A 2MAOA 3ANMA 4AICA 3FTUA 3RC8A 4K5MA 3CHQA 3AUAA 5DLLA 2MAPA 1ZS2A 3PUUA 4FCAA 4ARFA 3FTVA 3FUFA 2EGHA 1S46A 3CHPA 3RC3A 1JG9A 2R72A 3FUEA 1Q0HA 2WZFA 4ZW8A 2Y1EA 2PL5A 2C5ZA 4RCVA 4Y6SA 4XNDA 3VVMA 3KEDA 5JBIA 5JMWA 2QVWA 2ZXGA 4QIRA 5JNLA 1RP3A 1HS6A 3Q44A 2GTQA 2R70A 1X3WA 3ZHZA 3B3BA 2VJ8A 3FUNA 4XN5A 1Q0QA 1MW2A 1JVSA 4J3BA 4OOEA 1MW3A 4A03A 1SG7A 3FUJA 3B34A 3ANNA 4FLRA 3FU6A 3Q43A 2JCYA 3CHSA 3FUDA 2JV7A 4L2LA 4XN4A 2HPTA 5JC1A 4LUPA 1R0KA 1MW0A 3EBHA 4GAAA 4ZQEA 2HPOA 4K5OA 4ZX4A 4XO5A 3FH5A 2JCVA 4FLQA 3ZHXA 2Y1CA 4Y67A 3EBIA 3WQSB 3B7TA 3B2PA 4ZW7A 3WQQA 4ZW6A 3FUHA 2Y1DA 4QPEA 3B7RL 4Q4IA 2PUSA 1MW1A 3AU9A 3FUKA 3CHRA 5FWQA 1ONOA 2PGGA 2JD0A 4ZN6A 4R5VA 1X3ZA 2JD1A 1ONPA 2FFLA 2Y1FA 2R59A 3B7UX 2A7OA 2B61A 2DQMA 1Q0LA 3IIEA 4ZQGA 5DYFA 4KP7A 3ZI0A 1MVYA 2DQ6A 3FTXA 4XO4A 1GW6A 3UERA 4R5TA 4NQWA 4ZQHA 4R5XA 4AR1A 4AYSA 4MS6A 5HNHA 3FUMA 2XQ0A 3EBGA 3FU5A 2WPGA 3FTYA 3WQRA 3UCQA 4XMVA 3CZEA 1SC5A 4QHPA 1T1SA 4XNAA 3CHOA 4K5PA 3CZKA 5AENA 4ZQFA 3FTWA 4JNDA 5EV7A 4PW4A 4PVBA 5BPPA 2RJIA 3FTSA 4ZX6A 2XPZA 4XO3A 5JMPA 4Y6PA 4XMUA 5HNFA 4XN1A 4Y6RA 4X2UA 3FH8A 4PU2A 3ZHYA 4CXFA 4GAEA 3FUIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RJI A; 
#chains in the Genus database with same CATH topology
 4ZX5 A;  3RAS A;  1ONN A;  3AU8 A;  3A06 A;  3ANL A;  1SQM A;  4XN9 A;  4FLS A;  3QJX A;  5DUL A;  3UEQ A;  3FTZ A;  1R0L A;  3FHE A;  4XN7 A;  3B2X A;  3B37 A;  4MKT A;  5JAZ A;  3T0Y A;  1OR7 A;  3B7S A;  3CZG A;  3VVL A;  4QME A;  4ZQT A;  1K5H A;  3HW2 A;  3U9W A;  4ZW5 A;  2XPY A;  1JGI A;  3JT1 A;  4XMZ A;  4ZX3 A;  3FU0 A;  2C82 A;  3CZL A;  3T8V A;  1T1R A;  3FH7 A;  4OOF A;  4RSY A;  2QJ1 A;  4RVB A;  4AR8 A;  4XMT A;  2JCX A;  4FLO A;  2VLA A;  2Y1G A;  3FU3 A;  3FUL A;  1G5A A;  4XN8 A;  2WZG A;  4XMW A;  4XMX A;  4ZW3 A;  1H19 A;  3A14 A;  4K5N A;  2JD2 A;  1H3L A;  4QUO A;  2O7G A;  3R0I A;  4BKX A;  4K5L A;  4DPR A;  4AR9 A;  5HLT A;  5JO0 A;  4R7L A;  3CIA A;  4Q4E A;  3JSZ A;  4XNB A;  4XN2 A;  2MAO A;  3ANM A;  4AIC A;  3FTU A;  3RC8 A;  4K5M A;  3CHQ A;  3AUA A;  5DLL A;  2MAP A;  1ZS2 A;  3PUU A;  4FCA A;  4ARF A;  3FTV A;  3FUF A;  2EGH A;  1S46 A;  3CHP A;  3RC3 A;  1JG9 A;  2R72 A;  3FUE A;  1Q0H A;  2WZF A;  4ZW8 A;  2Y1E A;  2PL5 A;  2C5Z A;  4RCV A;  4Y6S A;  4XND A;  3VVM A;  3KED A;  5JBI A;  5JMW A;  2QVW A;  2ZXG A;  4QIR A;  5JNL A;  1RP3 A;  1HS6 A;  3Q44 A;  2GTQ A;  2R70 A;  1X3W A;  3ZHZ A;  3B3B A;  2VJ8 A;  3FUN A;  4XN5 A;  1Q0Q A;  1MW2 A;  1JVS A;  4J3B A;  4OOE A;  1MW3 A;  4A03 A;  1SG7 A;  3FUJ A;  3B34 A;  3ANN A;  4FLR A;  3FU6 A;  3Q43 A;  2JCY A;  3CHS A;  3FUD A;  2JV7 A;  4L2L A;  4XN4 A;  2HPT A;  5JC1 A;  4LUP A;  1R0K A;  1MW0 A;  3EBH A;  4GAA A;  4ZQE A;  2HPO A;  4K5O A;  4ZX4 A;  4XO5 A;  3FH5 A;  2JCV A;  4FLQ A;  3ZHX A;  2Y1C A;  4Y67 A;  3EBI A;  3WQS B;  3B7T A;  3B2P A;  4ZW7 A;  3WQQ A;  4ZW6 A;  3FUH A;  2Y1D A;  4QPE A;  3B7R L;  4Q4I A;  2PUS A;  1MW1 A;  3AU9 A;  3FUK A;  3CHR A;  5FWQ A;  1ONO A;  2PGG A;  2JD0 A;  3CXB A;  4ZN6 A;  4R5V A;  1X3Z A;  2JD1 A;  1ONP A;  2FFL A;  2Y1F A;  2R59 A;  3B7U X;  2A7O A;  2B61 A;  2DQM A;  1Q0L A;  3IIE A;  4ZQG A;  5DYF A;  4KP7 A;  3ZI0 A;  1MVY A;  2DQ6 A;  3FTX A;  4XO4 A;  1GW6 A;  3UER A;  4R5T A;  4NQW A;  4ZQH A;  4R5X A;  4AR1 A;  4AYS A;  4MS6 A;  5HNH A;  3FUM A;  2XQ0 A;  3EBG A;  3FU5 A;  2WPG A;  3FTY A;  3WQR A;  3UCQ A;  4XMV A;  3CZE A;  1SC5 A;  4QHP A;  1T1S A;  4XNA A;  3CHO A;  4K5P A;  3CZK A;  5AEN A;  4ZQF A;  3FTW A;  4JND A;  5EV7 A;  4PW4 A;  4PVB A;  5BPP A;  2RJI A;  3FTS A;  4ZX6 A;  2XPZ A;  4XO3 A;  5JMP A;  4Y6P A;  4XMU A;  5HNF A;  4XN1 A;  4Y6R A;  4X2U A;  3FH8 A;  4PU2 A;  3ZHY A;  4CXF A;  4GAE A;  3FUI A; 
#chains in the Genus database with same CATH homology
 4ZX5 A;  3RAS A;  1ONN A;  3AU8 A;  3A06 A;  3ANL A;  1SQM A;  4XN9 A;  4FLS A;  3QJX A;  5DUL A;  3UEQ A;  3FTZ A;  1R0L A;  3FHE A;  4XN7 A;  3B2X A;  3B37 A;  4MKT A;  5JAZ A;  3T0Y A;  1OR7 A;  3B7S A;  3CZG A;  3VVL A;  4QME A;  4ZQT A;  1K5H A;  3U9W A;  4ZW5 A;  2XPY A;  1JGI A;  3JT1 A;  4XMZ A;  4ZX3 A;  3FU0 A;  2C82 A;  3CZL A;  3T8V A;  1T1R A;  3FH7 A;  4OOF A;  4RSY A;  2QJ1 A;  4RVB A;  4AR8 A;  4XMT A;  2JCX A;  4FLO A;  2VLA A;  2Y1G A;  3FU3 A;  3FUL A;  1G5A A;  4XN8 A;  2WZG A;  4XMW A;  4XMX A;  4ZW3 A;  1H19 A;  3A14 A;  4K5N A;  2JD2 A;  1H3L A;  4QUO A;  2O7G A;  3R0I A;  4BKX A;  4K5L A;  4DPR A;  4AR9 A;  5HLT A;  5JO0 A;  4R7L A;  3CIA A;  4Q4E A;  3JSZ A;  4XNB A;  4XN2 A;  2MAO A;  3ANM A;  4AIC A;  3FTU A;  3RC8 A;  4K5M A;  3CHQ A;  3AUA A;  5DLL A;  2MAP A;  1ZS2 A;  3PUU A;  4FCA A;  4ARF A;  3FTV A;  3FUF A;  2EGH A;  1S46 A;  3CHP A;  3RC3 A;  1JG9 A;  2R72 A;  3FUE A;  1Q0H A;  2WZF A;  4ZW8 A;  2Y1E A;  2PL5 A;  2C5Z A;  4RCV A;  4Y6S A;  4XND A;  3VVM A;  3KED A;  5JBI A;  5JMW A;  2QVW A;  2ZXG A;  4QIR A;  5JNL A;  1RP3 A;  1HS6 A;  3Q44 A;  2GTQ A;  2R70 A;  1X3W A;  3ZHZ A;  3B3B A;  2VJ8 A;  3FUN A;  4XN5 A;  1Q0Q A;  1MW2 A;  1JVS A;  4J3B A;  4OOE A;  1MW3 A;  4A03 A;  1SG7 A;  3FUJ A;  3B34 A;  3ANN A;  4FLR A;  3FU6 A;  3Q43 A;  2JCY A;  3CHS A;  3FUD A;  2JV7 A;  4L2L A;  4XN4 A;  2HPT A;  5JC1 A;  4LUP A;  1R0K A;  1MW0 A;  3EBH A;  4GAA A;  4ZQE A;  2HPO A;  4K5O A;  4ZX4 A;  4XO5 A;  3FH5 A;  2JCV A;  4FLQ A;  3ZHX A;  2Y1C A;  4Y67 A;  3EBI A;  3WQS B;  3B7T A;  3B2P A;  4ZW7 A;  3WQQ A;  4ZW6 A;  3FUH A;  2Y1D A;  4QPE A;  3B7R L;  4Q4I A;  2PUS A;  1MW1 A;  3AU9 A;  3FUK A;  3CHR A;  5FWQ A;  1ONO A;  2PGG A;  2JD0 A;  4ZN6 A;  4R5V A;  1X3Z A;  2JD1 A;  1ONP A;  2FFL A;  2Y1F A;  2R59 A;  3B7U X;  2A7O A;  2B61 A;  2DQM A;  1Q0L A;  3IIE A;  4ZQG A;  5DYF A;  4KP7 A;  3ZI0 A;  1MVY A;  2DQ6 A;  3FTX A;  4XO4 A;  1GW6 A;  3UER A;  4R5T A;  4NQW A;  4ZQH A;  4R5X A;  4AR1 A;  4AYS A;  4MS6 A;  5HNH A;  3FUM A;  2XQ0 A;  3EBG A;  3FU5 A;  2WPG A;  3FTY A;  3WQR A;  3UCQ A;  4XMV A;  3CZE A;  1SC5 A;  4QHP A;  1T1S A;  4XNA A;  3CHO A;  4K5P A;  3CZK A;  5AEN A;  4ZQF A;  3FTW A;  4JND A;  5EV7 A;  4PW4 A;  4PVB A;  5BPP A;  2RJI A;  3FTS A;  4ZX6 A;  2XPZ A;  4XO3 A;  5JMP A;  4Y6P A;  4XMU A;  5HNF A;  4XN1 A;  4Y6R A;  4X2U A;  3FH8 A;  4PU2 A;  3ZHY A;  4CXF A;  4GAE A;  3FUI A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...