The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
144
|
sequence length |
482
|
structure length |
482
|
Chain Sequence |
EERVYQLLPKGDVEGMRELHQRGMSFSPYEPTGIYVKPDEEVVIQVEGTQQIKAYIGTYSYEKEGPKQFNLHPGENKISSSNGGLLYFYNYHNTGEVVAKVKKGGTPNPLFILGKHTTKDWKRMLAENPDPYAIEMKGENSLLTMHPETVAEHLKQEDPAALLKKHDEIINIEHKMSGLSKDGAGVANQGKHSIHFVEDWYTDDYMYATYYRTAYSKGNLESVLNLEELTNDGWGPWHEVGHQHQQDTWLWDGLGDVTVNIYSLAVQTTFGHKTRLEQEGRYEAAFAYLGKPDAQEKMNEFEKLVMFWQLHLAYGDQFYPNLHQMYRLLHDTELPKSDEEKKQMFIYMTSKVAGQNLIPFFDKWGLSANDATREKIEKLNLPKLEKEIWLSTDSNPIREKQIELYEAPYGEPNNEKIQNMVIGTTYDEEKAKELVQNLGEGVKTTGVIMQDTPEVGEKTVKVEIVDGKGNKNFIPVVVNVGY
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
publication title |
The crystal structure of a functionally unknown conserved protein mutant from Bacillus anthracis str. Ames.
rcsb |
molecule tags |
Unknown function
|
source organism |
Bacillus anthracis str. ames
|
molecule keywords |
Conserved domain protein
|
total genus |
144
|
structure length |
482
|
sequence length |
482
|
ec nomenclature | |
pdb deposition date | 2015-11-19 |
chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
---|---|---|---|
A | PF13402 | Peptidase_M60 | Peptidase M60, enhancin and enhancin-like |
A | PF17291 | M60-like_N | N-terminal domain of M60-like peptidases |
cath code
| Class | Architecture | Topology | Homology | Domain |
---|---|---|---|---|---|
Mainly Alpha | Orthogonal Bundle | Neutral Protease; domain 2 | Neutral Protease; domain 2 | ||
Mainly Alpha | Orthogonal Bundle | Rna Polymerase Sigma Factor; Chain: A | Rna Polymerase Sigma Factor; Chain: A | ||
Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulin-like | ||
Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls |