1T3CA

Clostridium botulinum type e catalytic domain e212q mutant
Total Genus 137
50100150200250300350400020406080100120140
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
411
structure length
411
Chain Sequence
PKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETNSSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHQLIHSLHGLYGAKGITTKYTITQKQNPLITNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNINKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITGRGLVKKIIRFC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TI1 (7-10)AH1 (76-94)TI10 (135-138)TIV1 (13-16)S2 (29-35)TII1 (22-25)EMPTYAH2 (97-108)TII2 (35-38)S6 (147-151)S3 (38-44)TII3 (46-49)3H1 (51-54)TI2 (58-61)TIV3 (56-59)TI3 (59-62)TII4 (61-64)TI4 (63-66)TII6 (398-401)TVIII3 (153-156)TI5 (69-72)TII5 (71-74)TI12 (186-189)TI20 (364-367)TIV12 (365-368)TI21 (369-372)AH8 (335-342)TVIII2 (94-97)AH7 (320-332)AH5 (264-286)TI6 (115-118)TI7 (119-122)TI8 (126-129)TI9 (127-130)S5 (140-143)S7 (160-163)TIV4 (152-155)TI11 (155-158)AH3 (205-221)3H2 (167-169)3H3 (172-174)TI14 (224-227)AH6 (296-306)TIV5 (175-178)S9 (189-194)S15 (356-359)S10 (200-202)TI13 (195-198)3H6 (377-386)TI15 (225-228)TI16 (226-229)TIV6 (227-230)AH4 (248-254)S11 (231-232)S12 (246-247)TI17 (233-236)TIV10 (242-245)S14 (315-318)3H5 (293-295)TVIII5 (290-293)S13 (308-311)S16 (395-396)TIV11 (359-362)TI19 (361-364)TI22 (370-373)TII'1 (372-375)TIV13 (373-376)TI23 (387-390)TI24 (388-391)3H7 (392-394)AH9 (403-407)TII7 (400-403)S1 (17-21)S4 (131-134)S8 (181-184)TIV15 (407-410)3H4 (256-261)TI18 (311-314)Updating...
connected with : NaN
molecule tags Hydrolase, toxin
source organism Clostridium botulinum
publication title Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway
pubmed doi rcsb
molecule keywords neurotoxin type E
total genus 137
structure length 411
sequence length 411
chains with identical sequence B
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2004-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01742 Peptidase_M27 Clostridial neurotoxin zinc protease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 1t3cA00
1ZB7A 3ZUSA 1ZKXA 2QN0A 2G7KA 2ISHA 3QW5A 3VUOA 1S0FA 3C89A 3FFZA 3DSEA 3C8AA 4ZKTB 3NF3A 1S0EA 3C8BA 2IMBA 2G7QA 2NYYA 3DDBA 1EPWA 4KUFA 2ETFA 2A97A 1S0CA 4J1LA 2IMCA 1S0BA 4KS6A 2NP0A 3ZURA 2FPQA 2ISGA 1G9AA 1T3AA 1G9BA 1ZKWA 3BOOA 3DEBA 1XTFA 3QIZA 3BTAA 1YVGA 1G9DA 1G9CA 3DDAA 4KTXA 3V0AA 1ZN3A 3K3QB 5BQMA 1ZL5A 3V0AB 1Z7HA 1S0DA 2G7NA 3V0BA 1F31A 3QW7A 2NZ9A 3QIYA 3QW8A 2IMAA 3V0BB 3FIEA 2ILPA 4EL4A 1XTGA 3QJ0A 2ISEA 2A8AA 1E1HA 3DS9A 1T3CA 1I1EA 4HEVA 3D3XA 2G7PA 1S0GA 3C88A 3QIXA 3BWIA 4ELCA 5BQNA 4EJ5A 2XHLA 3ZUQA 3QW6A 1F82A 3FIIA 2W2DA 4ZJXA 1ZL6A 3BONA 3BOKA
chains in the Genus database with same CATH superfamily
1ZB7A 3ZUSA 1ZKXA 2QN0A 2G7KA 2ISHA 3QW5A 3VUOA 1S0FA 3C89A 3FFZA 3DSEA 3C8AA 4ZKTB 3NF3A 1S0EA 3C8BA 3CQBA 2IMBA 2G7QA 2NYYA 3DDBA 1EPWA 4KUFA 2ETFA 2A97A 1S0CA 4J1LA 2IMCA 2EJQA 1S0BA 4KS6A 2NP0A 3ZURA 2FPQA 2ISGA 1G9AA 1T3AA 1G9BA 1ZKWA 3BOOA 3DEBA 1XTFA 3QIZA 3BTAA 1YVGA 1G9DA 1G9CA 3DDAA 4KTXA 4AW6A 3V0AA 1ZN3A 4QHFA 3K3QB 5BQMA 1ZL5A 3V0AB 1Z7HA 1S0DA 2G7NA 3V0BA 1F31A 3E11A 3QW7A 2NZ9A 3QIYA 3QW8A 2IMAA 3V0BB 3FIEA 2ILPA 4EL4A 1XTGA 3QJ0A 4IL3A 2ISEA 2A8AA 1E1HA 3DS9A 1T3CA 4JIUA 1I1EA 4HEVA 3D3XA 2G7PA 1S0GA 3C88A 3QIXA 3BWIA 4ELCA 5BQNA 4EJ5A 2XHLA 3ZUQA 3QW6A 1F82A 3FIIA 4JIXA 2YPTA 2W2DA 4ZJXA 1ZL6A 3BONA 3BOKA
chains in the Genus database with same CATH topology
1ZB7A 3ZUSA 1ZKXA 2QN0A 2G7KA 2ISHA 3QW5A 3VUOA 1S0FA 3C89A 3FFZA 3DSEA 3C8AA 4ZKTB 3NF3A 1S0EA 3C8BA 2IMBA 2G7QA 2NYYA 3DDBA 1EPWA 4KUFA 2ETFA 2A97A 1S0CA 4J1LA 2IMCA 1S0BA 4KS6A 2NP0A 3ZURA 2FPQA 2ISGA 1G9AA 1T3AA 1G9BA 1ZKWA 3BOOA 3DEBA 1XTFA 3QIZA 3BTAA 1YVGA 1G9DA 1G9CA 3DDAA 4KTXA 3V0AA 1ZN3A 3K3QB 5BQMA 1ZL5A 3V0AB 1Z7HA 1S0DA 2G7NA 3V0BA 1F31A 3QW7A 2NZ9A 3QIYA 3QW8A 2IMAA 3V0BB 3FIEA 2ILPA 4EL4A 1XTGA 3QJ0A 2ISEA 2A8AA 1E1HA 3DS9A 1T3CA 1I1EA 4HEVA 3D3XA 2G7PA 1S0GA 3C88A 3QIXA 3BWIA 4ELCA 5BQNA 4EJ5A 2XHLA 3ZUQA 3QW6A 1F82A 3FIIA 2W2DA 4ZJXA 1ZL6A 3BONA 3BOKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZB7 A;  3ZUS A;  1ZKX A;  2QN0 A;  2G7K A;  2ISH A;  3QW5 A;  3VUO A;  1S0F A;  3C89 A;  3FFZ A;  3DSE A;  3C8A A;  4ZKT B;  3NF3 A;  1S0E A;  3C8B A;  2IMB A;  2G7Q A;  2NYY A;  3DDB A;  1EPW A;  4KUF A;  2ETF A;  2A97 A;  1S0C A;  4J1L A;  2IMC A;  1S0B A;  4KS6 A;  2NP0 A;  3ZUR A;  2FPQ A;  2ISG A;  1G9A A;  1T3A A;  1G9B A;  1ZKW A;  3BOO A;  3DEB A;  1XTF A;  3QIZ A;  3BTA A;  1YVG A;  1G9D A;  1G9C A;  3DDA A;  4KTX A;  3V0A A;  1ZN3 A;  3K3Q B;  5BQM A;  1ZL5 A;  3V0A B;  1Z7H A;  1S0D A;  2G7N A;  3V0B A;  1F31 A;  3QW7 A;  2NZ9 A;  3QIY A;  3QW8 A;  2IMA A;  3V0B B;  3FIE A;  2ILP A;  4EL4 A;  1XTG A;  3QJ0 A;  2ISE A;  2A8A A;  1E1H A;  3DS9 A;  1T3C A;  1I1E A;  4HEV A;  3D3X A;  2G7P A;  1S0G A;  3C88 A;  3QIX A;  3BWI A;  4ELC A;  5BQN A;  4EJ5 A;  2XHL A;  3ZUQ A;  3QW6 A;  1F82 A;  3FII A;  2W2D A;  4ZJX A;  1ZL6 A;  3BON A;  3BOK A; 
#chains in the Genus database with same CATH topology
 1ZB7 A;  3ZUS A;  1ZKX A;  2QN0 A;  2G7K A;  2ISH A;  3QW5 A;  3VUO A;  1S0F A;  3C89 A;  3FFZ A;  3DSE A;  3C8A A;  4ZKT B;  3NF3 A;  1S0E A;  3C8B A;  3CQB A;  2IMB A;  2G7Q A;  2NYY A;  3DDB A;  1EPW A;  4KUF A;  2ETF A;  2A97 A;  1S0C A;  4J1L A;  2IMC A;  2EJQ A;  1S0B A;  4KS6 A;  2NP0 A;  3ZUR A;  2FPQ A;  2ISG A;  1G9A A;  1T3A A;  1G9B A;  1ZKW A;  3BOO A;  3DEB A;  1XTF A;  3QIZ A;  3BTA A;  1YVG A;  1G9D A;  1G9C A;  3DDA A;  4KTX A;  4AW6 A;  3V0A A;  1ZN3 A;  4QHF A;  3K3Q B;  5BQM A;  1ZL5 A;  3V0A B;  1Z7H A;  1S0D A;  2G7N A;  3V0B A;  1F31 A;  3E11 A;  3QW7 A;  2NZ9 A;  3QIY A;  3QW8 A;  2IMA A;  3V0B B;  3FIE A;  2ILP A;  4EL4 A;  1XTG A;  3QJ0 A;  4IL3 A;  2ISE A;  2A8A A;  1E1H A;  3DS9 A;  1T3C A;  4JIU A;  1I1E A;  4HEV A;  3D3X A;  2G7P A;  1S0G A;  3C88 A;  3QIX A;  3BWI A;  4ELC A;  5BQN A;  4EJ5 A;  2XHL A;  3ZUQ A;  3QW6 A;  1F82 A;  3FII A;  4JIX A;  2YPT A;  2W2D A;  4ZJX A;  1ZL6 A;  3BON A;  3BOK A; 
#chains in the Genus database with same CATH homology
 1ZB7 A;  3ZUS A;  1ZKX A;  2QN0 A;  2G7K A;  2ISH A;  3QW5 A;  3VUO A;  1S0F A;  3C89 A;  3FFZ A;  3DSE A;  3C8A A;  4ZKT B;  3NF3 A;  1S0E A;  3C8B A;  2IMB A;  2G7Q A;  2NYY A;  3DDB A;  1EPW A;  4KUF A;  2ETF A;  2A97 A;  1S0C A;  4J1L A;  2IMC A;  1S0B A;  4KS6 A;  2NP0 A;  3ZUR A;  2FPQ A;  2ISG A;  1G9A A;  1T3A A;  1G9B A;  1ZKW A;  3BOO A;  3DEB A;  1XTF A;  3QIZ A;  3BTA A;  1YVG A;  1G9D A;  1G9C A;  3DDA A;  4KTX A;  3V0A A;  1ZN3 A;  3K3Q B;  5BQM A;  1ZL5 A;  3V0A B;  1Z7H A;  1S0D A;  2G7N A;  3V0B A;  1F31 A;  3QW7 A;  2NZ9 A;  3QIY A;  3QW8 A;  2IMA A;  3V0B B;  3FIE A;  2ILP A;  4EL4 A;  1XTG A;  3QJ0 A;  2ISE A;  2A8A A;  1E1H A;  3DS9 A;  1T3C A;  1I1E A;  4HEV A;  3D3X A;  2G7P A;  1S0G A;  3C88 A;  3QIX A;  3BWI A;  4ELC A;  5BQN A;  4EJ5 A;  2XHL A;  3ZUQ A;  3QW6 A;  1F82 A;  3FII A;  2W2D A;  4ZJX A;  1ZL6 A;  3BON A;  3BOK A; 
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