3C8AA

Crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgl
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
422
structure length
422
Chain Sequence
PFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase/hydrolase inhibitor
source organism Clostridium botulinum
publication title Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
pubmed doi rcsb
molecule keywords Botulinum neurotoxin A light chain
total genus 147
structure length 422
sequence length 422
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2008-02-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 3c8aA00
2ISGA 3BWIA 3V0AB 2ISHA 2IMBA 2NYYA 1S0FA 1F31A 1ZN3A 3QW6A 1F82A 3QJ0A 1ZL6A 1S0CA 2XHLA 3DDBA 2NZ9A 3BTAA 3V0BB 1S0GA 2IMAA 1S0EA 2QN0A 3FIEA 2ETFA 3BOOA 4EL4A 3D3XA 2G7NA 2G7PA 3ZUSA 5BQNA 4HEVA 1E1HA 2G7QA 1I1EA 1Z7HA 2A8AA 3DS9A 1G9CA 1S0DA 1G9DA 3DSEA 3BONA 1ZB7A 1T3CA 4KTXA 1G9AA 3BOKA 3V0AA 2NP0A 4J1LA 1XTFA 2G7KA 1G9BA 4EJ5A 1XTGA 1S0BA 1YVGA 3QIZA 3ZUQA 1EPWA 3C8AA 3V0BA 3K3QB 2FPQA 3QIXA 3DEBA 2ILPA 3FFZA 5BQMA 3C8BA 2W2DA 4ZKTB 3NF3A 4ELCA 3QW5A 3C88A 2ISEA 1ZKXA 3DDAA 3ZURA 3C89A 2A97A 1ZL5A 4KS6A 3VUOA 2IMCA 4ZJXA 3QIYA 1T3AA 3FIIA 3QW8A 1ZKWA 4KUFA 3QW7A
chains in the Genus database with same CATH superfamily
2ISGA 3BWIA 3V0AB 2ISHA 2IMBA 2NYYA 1S0FA 1F31A 1ZN3A 3QW6A 1F82A 3QJ0A 1ZL6A 1S0CA 2XHLA 3DDBA 2NZ9A 3BTAA 3V0BB 1S0GA 2IMAA 3CQBA 1S0EA 2QN0A 3FIEA 2ETFA 3BOOA 4EL4A 2EJQA 3D3XA 2G7NA 2G7PA 3ZUSA 5BQNA 4HEVA 1E1HA 2YPTA 2G7QA 1I1EA 1Z7HA 2A8AA 3DS9A 1G9CA 1S0DA 1G9DA 3DSEA 3BONA 1ZB7A 1T3CA 4KTXA 1G9AA 3BOKA 3V0AA 2NP0A 4QHFA 4J1LA 1XTFA 2G7KA 1G9BA 4EJ5A 1XTGA 1S0BA 4JIUA 4IL3A 1YVGA 3QIZA 3ZUQA 1EPWA 3C8AA 3V0BA 3K3QB 4JIXA 2FPQA 3QIXA 3DEBA 2ILPA 3FFZA 5BQMA 3C8BA 2W2DA 4ZKTB 3NF3A 4ELCA 3E11A 3QW5A 3C88A 2ISEA 4AW6A 1ZKXA 3DDAA 3ZURA 3C89A 2A97A 1ZL5A 4KS6A 3VUOA 2IMCA 3QW8A 3QIYA 1T3AA 3FIIA 4KUFA 1ZKWA 4ZJXA 3QW7A
chains in the Genus database with same CATH topology
2ISGA 3BWIA 3V0AB 2ISHA 2IMBA 2NYYA 1S0FA 1F31A 1ZN3A 3QW6A 1F82A 3QJ0A 1ZL6A 1S0CA 2XHLA 3DDBA 2NZ9A 3BTAA 3V0BB 1S0GA 2IMAA 1S0EA 2QN0A 3FIEA 2ETFA 3BOOA 4EL4A 3D3XA 2G7NA 2G7PA 3ZUSA 5BQNA 4HEVA 1E1HA 2G7QA 1I1EA 1Z7HA 2A8AA 3DS9A 1G9CA 1S0DA 1G9DA 3DSEA 3BONA 1ZB7A 1T3CA 4KTXA 1G9AA 3BOKA 3V0AA 2NP0A 4J1LA 1XTFA 2G7KA 1G9BA 4EJ5A 1XTGA 1S0BA 1YVGA 3QIZA 3ZUQA 1EPWA 3C8AA 3V0BA 3K3QB 2FPQA 3QIXA 3DEBA 2ILPA 3FFZA 5BQMA 3C8BA 2W2DA 4ZKTB 3NF3A 4ELCA 3QW5A 3C88A 2ISEA 1ZKXA 3DDAA 3ZURA 3C89A 2A97A 1ZL5A 4KS6A 3VUOA 2IMCA 4ZJXA 3QIYA 1T3AA 3FIIA 3QW8A 1ZKWA 4KUFA 3QW7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ISG A;  3BWI A;  3V0A B;  2ISH A;  2IMB A;  2NYY A;  1S0F A;  1F31 A;  1ZN3 A;  3QW6 A;  1F82 A;  3QJ0 A;  1ZL6 A;  1S0C A;  2XHL A;  3DDB A;  2NZ9 A;  3BTA A;  3V0B B;  1S0G A;  2IMA A;  1S0E A;  2QN0 A;  3FIE A;  2ETF A;  3BOO A;  4EL4 A;  3D3X A;  2G7N A;  2G7P A;  3ZUS A;  5BQN A;  4HEV A;  1E1H A;  2G7Q A;  1I1E A;  1Z7H A;  2A8A A;  3DS9 A;  1G9C A;  1S0D A;  1G9D A;  3DSE A;  3BON A;  1ZB7 A;  1T3C A;  4KTX A;  1G9A A;  3BOK A;  3V0A A;  2NP0 A;  4J1L A;  1XTF A;  2G7K A;  1G9B A;  4EJ5 A;  1XTG A;  1S0B A;  1YVG A;  3QIZ A;  3ZUQ A;  1EPW A;  3C8A A;  3V0B A;  3K3Q B;  2FPQ A;  3QIX A;  3DEB A;  2ILP A;  3FFZ A;  5BQM A;  3C8B A;  2W2D A;  4ZKT B;  3NF3 A;  4ELC A;  3QW5 A;  3C88 A;  2ISE A;  1ZKX A;  3DDA A;  3ZUR A;  3C89 A;  2A97 A;  1ZL5 A;  4KS6 A;  3VUO A;  2IMC A;  4ZJX A;  3QIY A;  1T3A A;  3FII A;  3QW8 A;  1ZKW A;  4KUF A;  3QW7 A; 
#chains in the Genus database with same CATH topology
 2ISG A;  3BWI A;  3V0A B;  2ISH A;  2IMB A;  2NYY A;  1S0F A;  1F31 A;  1ZN3 A;  3QW6 A;  1F82 A;  3QJ0 A;  1ZL6 A;  1S0C A;  2XHL A;  3DDB A;  2NZ9 A;  3BTA A;  3V0B B;  1S0G A;  2IMA A;  3CQB A;  1S0E A;  2QN0 A;  3FIE A;  2ETF A;  3BOO A;  4EL4 A;  2EJQ A;  3D3X A;  2G7N A;  2G7P A;  3ZUS A;  5BQN A;  4HEV A;  1E1H A;  2YPT A;  2G7Q A;  1I1E A;  1Z7H A;  2A8A A;  3DS9 A;  1G9C A;  1S0D A;  1G9D A;  3DSE A;  3BON A;  1ZB7 A;  1T3C A;  4KTX A;  1G9A A;  3BOK A;  3V0A A;  2NP0 A;  4QHF A;  4J1L A;  1XTF A;  2G7K A;  1G9B A;  4EJ5 A;  1XTG A;  1S0B A;  4JIU A;  4IL3 A;  1YVG A;  3QIZ A;  3ZUQ A;  1EPW A;  3C8A A;  3V0B A;  3K3Q B;  4JIX A;  2FPQ A;  3QIX A;  3DEB A;  2ILP A;  3FFZ A;  5BQM A;  3C8B A;  2W2D A;  4ZKT B;  3NF3 A;  4ELC A;  3E11 A;  3QW5 A;  3C88 A;  2ISE A;  4AW6 A;  1ZKX A;  3DDA A;  3ZUR A;  3C89 A;  2A97 A;  1ZL5 A;  4KS6 A;  3VUO A;  2IMC A;  3QW8 A;  3QIY A;  1T3A A;  3FII A;  4KUF A;  1ZKW A;  4ZJX A;  3QW7 A; 
#chains in the Genus database with same CATH homology
 2ISG A;  3BWI A;  3V0A B;  2ISH A;  2IMB A;  2NYY A;  1S0F A;  1F31 A;  1ZN3 A;  3QW6 A;  1F82 A;  3QJ0 A;  1ZL6 A;  1S0C A;  2XHL A;  3DDB A;  2NZ9 A;  3BTA A;  3V0B B;  1S0G A;  2IMA A;  1S0E A;  2QN0 A;  3FIE A;  2ETF A;  3BOO A;  4EL4 A;  3D3X A;  2G7N A;  2G7P A;  3ZUS A;  5BQN A;  4HEV A;  1E1H A;  2G7Q A;  1I1E A;  1Z7H A;  2A8A A;  3DS9 A;  1G9C A;  1S0D A;  1G9D A;  3DSE A;  3BON A;  1ZB7 A;  1T3C A;  4KTX A;  1G9A A;  3BOK A;  3V0A A;  2NP0 A;  4J1L A;  1XTF A;  2G7K A;  1G9B A;  4EJ5 A;  1XTG A;  1S0B A;  1YVG A;  3QIZ A;  3ZUQ A;  1EPW A;  3C8A A;  3V0B A;  3K3Q B;  2FPQ A;  3QIX A;  3DEB A;  2ILP A;  3FFZ A;  5BQM A;  3C8B A;  2W2D A;  4ZKT B;  3NF3 A;  4ELC A;  3QW5 A;  3C88 A;  2ISE A;  1ZKX A;  3DDA A;  3ZUR A;  3C89 A;  2A97 A;  1ZL5 A;  4KS6 A;  3VUO A;  2IMC A;  4ZJX A;  3QIY A;  1T3A A;  3FII A;  3QW8 A;  1ZKW A;  4KUF A;  3QW7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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