3C8AA

Crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgl
Total Genus 147
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
422
structure length
422
Chain Sequence
PFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase/hydrolase inhibitor
source organism Clostridium botulinum
publication title Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
pubmed doi rcsb
molecule keywords Botulinum neurotoxin A light chain
total genus 147
structure length 422
sequence length 422
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2008-02-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 3c8aA00
3V0BA 3FFZA 3VUOA 3ZUQA 3QJ0A 3C8AA 1ZKWA 1ZL5A 3D3XA 4EL4A 1F31A 2ILPA 2G7KA 3DSEA 4KTXA 1G9AA 1T3CA 1E1HA 2QN0A 3DDAA 2NP0A 1I1EA 1S0CA 4ELCA 2G7QA 3BOKA 3V0AB 5BQMA 3QW7A 2ISGA 1G9BA 2ISEA 3QIXA 3QW6A 1ZB7A 1S0BA 3DS9A 2A8AA 2NZ9A 1S0DA 1G9DA 1XTFA 3DEBA 1S0FA 2FPQA 3V0AA 2G7NA 4ZKTB 2G7PA 3V0BB 4KS6A 3ZUSA 3ZURA 4EJ5A 3BONA 3BOOA 3NF3A 1EPWA 3FIEA 2XHLA 3QW5A 2IMCA 3FIIA 3K3QB 2IMAA 2A97A 1T3AA 1S0GA 1XTGA 5BQNA 1G9CA 1Z7HA 3QIZA 2W2DA 1ZN3A 1YVGA 3QW8A 3QIYA 3DDBA 2IMBA 2ISHA 1F82A 1ZL6A 3C88A 2ETFA 3C89A 4ZJXA 4KUFA 3BTAA 3C8BA 2NYYA 4J1LA 4HEVA 1ZKXA 3BWIA 1S0EA
chains in the Genus database with same CATH superfamily
3V0BA 3FFZA 3VUOA 3ZUQA 3QJ0A 3C8AA 1ZKWA 1ZL5A 3D3XA 4EL4A 1F31A 2ILPA 2G7KA 4JIUA 3DSEA 2EJQA 4JIXA 4IL3A 4KTXA 1G9AA 1T3CA 1E1HA 2QN0A 3DDAA 2NP0A 1I1EA 1S0CA 4ELCA 2G7QA 3BOKA 3V0AB 5BQMA 3QW7A 2ISGA 1G9BA 2ISEA 4AW6A 3QIXA 3QW6A 2YPTA 1ZB7A 1S0BA 3DS9A 2A8AA 2NZ9A 1S0DA 1G9DA 1XTFA 3DEBA 1S0FA 2FPQA 3V0AA 2G7NA 4ZKTB 2G7PA 3V0BB 4KS6A 3ZUSA 3ZURA 4EJ5A 3BONA 3BOOA 3CQBA 3NF3A 1EPWA 3FIEA 2XHLA 3QW5A 2IMCA 3FIIA 3K3QB 2IMAA 2A97A 1T3AA 1S0GA 1XTGA 5BQNA 1G9CA 1Z7HA 3QIZA 2W2DA 1ZN3A 1YVGA 3QW8A 3QIYA 3DDBA 2IMBA 2ISHA 3E11A 1F82A 1ZL6A 3C88A 2ETFA 3C89A 4ZJXA 4KUFA 4QHFA 3BTAA 3C8BA 2NYYA 4J1LA 4HEVA 1ZKXA 3BWIA 1S0EA
chains in the Genus database with same CATH topology
3V0BA 3FFZA 3VUOA 3ZUQA 3QJ0A 3C8AA 1ZKWA 1ZL5A 3D3XA 4EL4A 1F31A 2ILPA 2G7KA 3DSEA 4KTXA 1G9AA 1T3CA 1E1HA 2QN0A 3DDAA 2NP0A 1I1EA 1S0CA 4ELCA 2G7QA 3BOKA 3V0AB 5BQMA 3QW7A 2ISGA 1G9BA 2ISEA 3QIXA 3QW6A 1ZB7A 1S0BA 3DS9A 2A8AA 2NZ9A 1S0DA 1G9DA 1XTFA 3DEBA 1S0FA 2FPQA 3V0AA 2G7NA 4ZKTB 2G7PA 3V0BB 4KS6A 3ZUSA 3ZURA 4EJ5A 3BONA 3BOOA 3NF3A 1EPWA 3FIEA 2XHLA 3QW5A 2IMCA 3FIIA 3K3QB 2IMAA 2A97A 1T3AA 1S0GA 1XTGA 5BQNA 1G9CA 1Z7HA 3QIZA 2W2DA 1ZN3A 1YVGA 3QW8A 3QIYA 3DDBA 2IMBA 2ISHA 1F82A 1ZL6A 3C88A 2ETFA 3C89A 4ZJXA 4KUFA 3BTAA 3C8BA 2NYYA 4J1LA 4HEVA 1ZKXA 3BWIA 1S0EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3V0B A;  3FFZ A;  3VUO A;  3ZUQ A;  3QJ0 A;  3C8A A;  1ZKW A;  1ZL5 A;  3D3X A;  4EL4 A;  1F31 A;  2ILP A;  2G7K A;  3DSE A;  4KTX A;  1G9A A;  1T3C A;  1E1H A;  2QN0 A;  3DDA A;  2NP0 A;  1I1E A;  1S0C A;  4ELC A;  2G7Q A;  3BOK A;  3V0A B;  5BQM A;  3QW7 A;  2ISG A;  1G9B A;  2ISE A;  3QIX A;  3QW6 A;  1ZB7 A;  1S0B A;  3DS9 A;  2A8A A;  2NZ9 A;  1S0D A;  1G9D A;  1XTF A;  3DEB A;  1S0F A;  2FPQ A;  3V0A A;  2G7N A;  4ZKT B;  2G7P A;  3V0B B;  4KS6 A;  3ZUS A;  3ZUR A;  4EJ5 A;  3BON A;  3BOO A;  3NF3 A;  1EPW A;  3FIE A;  2XHL A;  3QW5 A;  2IMC A;  3FII A;  3K3Q B;  2IMA A;  2A97 A;  1T3A A;  1S0G A;  1XTG A;  5BQN A;  1G9C A;  1Z7H A;  3QIZ A;  2W2D A;  1ZN3 A;  1YVG A;  3QW8 A;  3QIY A;  3DDB A;  2IMB A;  2ISH A;  1F82 A;  1ZL6 A;  3C88 A;  2ETF A;  3C89 A;  4ZJX A;  4KUF A;  3BTA A;  3C8B A;  2NYY A;  4J1L A;  4HEV A;  1ZKX A;  3BWI A;  1S0E A; 
#chains in the Genus database with same CATH topology
 3V0B A;  3FFZ A;  3VUO A;  3ZUQ A;  3QJ0 A;  3C8A A;  1ZKW A;  1ZL5 A;  3D3X A;  4EL4 A;  1F31 A;  2ILP A;  2G7K A;  4JIU A;  3DSE A;  2EJQ A;  4JIX A;  4IL3 A;  4KTX A;  1G9A A;  1T3C A;  1E1H A;  2QN0 A;  3DDA A;  2NP0 A;  1I1E A;  1S0C A;  4ELC A;  2G7Q A;  3BOK A;  3V0A B;  5BQM A;  3QW7 A;  2ISG A;  1G9B A;  2ISE A;  4AW6 A;  3QIX A;  3QW6 A;  2YPT A;  1ZB7 A;  1S0B A;  3DS9 A;  2A8A A;  2NZ9 A;  1S0D A;  1G9D A;  1XTF A;  3DEB A;  1S0F A;  2FPQ A;  3V0A A;  2G7N A;  4ZKT B;  2G7P A;  3V0B B;  4KS6 A;  3ZUS A;  3ZUR A;  4EJ5 A;  3BON A;  3BOO A;  3CQB A;  3NF3 A;  1EPW A;  3FIE A;  2XHL A;  3QW5 A;  2IMC A;  3FII A;  3K3Q B;  2IMA A;  2A97 A;  1T3A A;  1S0G A;  1XTG A;  5BQN A;  1G9C A;  1Z7H A;  3QIZ A;  2W2D A;  1ZN3 A;  1YVG A;  3QW8 A;  3QIY A;  3DDB A;  2IMB A;  2ISH A;  3E11 A;  1F82 A;  1ZL6 A;  3C88 A;  2ETF A;  3C89 A;  4ZJX A;  4KUF A;  4QHF A;  3BTA A;  3C8B A;  2NYY A;  4J1L A;  4HEV A;  1ZKX A;  3BWI A;  1S0E A; 
#chains in the Genus database with same CATH homology
 3V0B A;  3FFZ A;  3VUO A;  3ZUQ A;  3QJ0 A;  3C8A A;  1ZKW A;  1ZL5 A;  3D3X A;  4EL4 A;  1F31 A;  2ILP A;  2G7K A;  3DSE A;  4KTX A;  1G9A A;  1T3C A;  1E1H A;  2QN0 A;  3DDA A;  2NP0 A;  1I1E A;  1S0C A;  4ELC A;  2G7Q A;  3BOK A;  3V0A B;  5BQM A;  3QW7 A;  2ISG A;  1G9B A;  2ISE A;  3QIX A;  3QW6 A;  1ZB7 A;  1S0B A;  3DS9 A;  2A8A A;  2NZ9 A;  1S0D A;  1G9D A;  1XTF A;  3DEB A;  1S0F A;  2FPQ A;  3V0A A;  2G7N A;  4ZKT B;  2G7P A;  3V0B B;  4KS6 A;  3ZUS A;  3ZUR A;  4EJ5 A;  3BON A;  3BOO A;  3NF3 A;  1EPW A;  3FIE A;  2XHL A;  3QW5 A;  2IMC A;  3FII A;  3K3Q B;  2IMA A;  2A97 A;  1T3A A;  1S0G A;  1XTG A;  5BQN A;  1G9C A;  1Z7H A;  3QIZ A;  2W2D A;  1ZN3 A;  1YVG A;  3QW8 A;  3QIY A;  3DDB A;  2IMB A;  2ISH A;  1F82 A;  1ZL6 A;  3C88 A;  2ETF A;  3C89 A;  4ZJX A;  4KUF A;  3BTA A;  3C8B A;  2NYY A;  4J1L A;  4HEV A;  1ZKX A;  3BWI A;  1S0E A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...