1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
1G79A 1WLKA 2I02A 4XJ2A 2X1JA 1RZ1A 3A20A 3CP3A 3U34A 4QVBA 3VY2A 1AXJA 1USFA 2OU5A 1I0SA 3U0IA 3AWHA 1T9MA 1XXOA 1TY9A 2ASFA 4HMXA 3FGEA 4HMSA 3ZOHA 4YBNA 1WGBA 3DMBA 1JNWA 4HMUA 3B5MA 3FKHA 3K86A 3R5RA 3KYGA 4HX6A 3ZOFA 4ZKYA 1WLIA 4HMWA 1W9AA 3K88A 3R5PA 1RFEA 1W3PA 4L82A 2RDEA 2IMLA 2E83A 1NRGA 1XHNA 3BA3A 2ARZA 1WV4A 1W3OA 2I51A 3DNHA 3PFTA 2D37A 4HMTA 4N7RC 4YWNA 2R6VA 1EJEA 1Y30A 3R5ZA 2ECRA 1W3RA 2ED4A 1DNLA 2Q9KA 2IG6A 1USCA 1VL7A 3BPKA 3ZOGA 1I0RA 3E4VA 3CB0A 5JABA 2D5MA 2X1KA 4F07A 3F7EA 3HY8A 3IN6A 2VPAA 3EC6A 3U35A 3SWJA 3NFWA 2QCKA 1G78A 2ECUA 2QEAA 3VY5A 3H96A 4Y9IA 2D36A 1YLNA 3AMFA 3A6RA 3ZOCA 1FLMA 5ESCA 3ZOEA 2HTIA 3BNKA 3R5LA 3U5WA 3HMZA 3A6QA 3ZODA 2A2JA 4HMVA 2HQ9A 2OL5A 3TGVA 2HHZA 2GJGA 5CHEC 2FG9A 3RH7A 2NR4A 3R5YA 2FURA 2HTDA 4XHYA 2R0XA 1W3QA 1YOAA 3VYAA 2D38A 3GASA 5BNCA 3DB0A 5CHOA 2AQ6A 4Z85A 1G77A 4R82A 2IABA 2RE7A 4IRAA 2FHQA 1CI0A 2PTFA 2HQ7A 1G76A 1RZ0A 3KYFA 3K87A 3R5WA
chains in the Genus database with same CATH superfamily
1G79A 1WLKA 2I02A 4HKHA 4XJ2A 2X1JA 1RZ1A 3A20A 3CP3A 3U34A 4QVBA 3VY2A 1AXJA 1USFA 2L1TA 2OU5A 1I0SA 4MTKA 3U0IA 3AWHA 1T9MA 1XXOA 4UHVA 1TY9A 2ASFA 4HMXA 3FGEA 4HMSA 3ZOHA 4YBNA 1WGBA 3DMBA 1JNWA 4HMUA 3B5MA 3FKHA 3K86A 3R5RA 3KYGA 4HX6A 3ZOFA 4ZKYA 1WLIA 4HMWA 1W9AA 3K88A 3R5PA 1RFEA 1W3PA 4L82A 2RDEA 4W64A 2IMLA 2E83A 1NRGA 1XHNA 2P5ZX 3BA3A 1Y12A 2ARZA 1WV4A 1W3OA 2I51A 3DNHA 3PFTA 2D37A 4HMTA 4N7RC 4YWNA 3V4HA 2R6VA 1EJEA 1Y30A 3R5ZA 2ECRA 1W3RA 2ED4A 1DNLA 2Q9KA 2IG6A 4TV4A 3EAAA 1USCA 1VL7A 3BPKA 3ZOGA 1I0RA 3E4VA 3CB0A 2K4QA 5JABA 2D5MA 3HE1A 2X1KA 4F07A 3F7EA 3HY8A 3IN6A 2VPAA 3EC6A 3U35A 3SWJA 3NFWA 2QCKA 1G78A 2ECUA 2QEAA 3VY5A 3H96A 4Y9IA 2D36A 1YLNA 3AMFA 3A6RA 3ZOCA 1FLMA 5ESCA 3ZOEA 2HTIA 3BNKA 3R5LA 3U5WA 3HMZA 3A6QA 3ZODA 2A2JA 4HMVA 2HQ9A 2OL5A 3TGVA 2HHZA 2GJGA 5CHEC 2FG9A 3RH7A 2NR4A 3R5YA 2FURA 2HTDA 4XHYA 2R0XA 1W3QA 1YOAA 3VYAA 2D38A 3GASA 5BNCA 3DB0A 5CHOA 2AQ6A 4Z85A 1G77A 2GUJA 2IABA 2RE7A 4IRAA 4R82A 2FHQA 1CI0A 2PTFA 2HQ7A 1G76A 1RZ0A 3KYFA 3K87A 3R5WA
chains in the Genus database with same CATH topology
1G79A 1WLKA 2I02A 4XJ2A 2X1JA 1RZ1A 3A20A 3CP3A 3U34A 4QVBA 3VY2A 1AXJA 1USFA 2OU5A 1I0SA 3U0IA 3AWHA 1T9MA 1XXOA 1TY9A 2ASFA 4HMXA 3FGEA 4HMSA 3ZOHA 4YBNA 1WGBA 3DMBA 1JNWA 4HMUA 3B5MA 3FKHA 3K86A 3R5RA 3KYGA 4HX6A 3ZOFA 4ZKYA 1WLIA 4HMWA 1W9AA 3K88A 3R5PA 1RFEA 1W3PA 4L82A 2RDEA 2IMLA 2E83A 1NRGA 1XHNA 3BA3A 2ARZA 1WV4A 1W3OA 2I51A 3DNHA 3PFTA 2D37A 4HMTA 4N7RC 4YWNA 2R6VA 1EJEA 1Y30A 3R5ZA 2ECRA 1W3RA 2ED4A 1DNLA 2Q9KA 2IG6A 1USCA 1VL7A 3BPKA 3ZOGA 1I0RA 3E4VA 3CB0A 5JABA 2D5MA 2X1KA 4F07A 3F7EA 3HY8A 3IN6A 2VPAA 3EC6A 3U35A 3SWJA 3NFWA 2QCKA 1G78A 2ECUA 2QEAA 3VY5A 3H96A 4Y9IA 2D36A 1YLNA 3AMFA 3A6RA 3ZOCA 1FLMA 5ESCA 3ZOEA 2HTIA 3BNKA 3R5LA 3U5WA 3HMZA 3A6QA 3ZODA 2A2JA 4HMVA 2HQ9A 2OL5A 3TGVA 2HHZA 2GJGA 5CHEC 2FG9A 3RH7A 2NR4A 3R5YA 2FURA 2HTDA 4XHYA 2R0XA 1W3QA 1YOAA 3VYAA 2D38A 3GASA 5BNCA 3DB0A 5CHOA 2AQ6A 4Z85A 1G77A 4R82A 2IABA 2RE7A 4IRAA 2FHQA 1CI0A 2PTFA 2HQ7A 1G76A 1RZ0A 3KYFA 3K87A 3R5WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G79 A;  1WLK A;  2I02 A;  4XJ2 A;  2X1J A;  1RZ1 A;  3A20 A;  3CP3 A;  3U34 A;  4QVB A;  3VY2 A;  1AXJ A;  1USF A;  2OU5 A;  1I0S A;  3U0I A;  3AWH A;  1T9M A;  1XXO A;  1TY9 A;  2ASF A;  4HMX A;  3FGE A;  4HMS A;  3ZOH A;  4YBN A;  1WGB A;  3DMB A;  1JNW A;  4HMU A;  3B5M A;  3FKH A;  3K86 A;  3R5R A;  3KYG A;  4HX6 A;  3ZOF A;  4ZKY A;  1WLI A;  4HMW A;  1W9A A;  3K88 A;  3R5P A;  1RFE A;  1W3P A;  4L82 A;  2RDE A;  2IML A;  2E83 A;  1NRG A;  1XHN A;  3BA3 A;  2ARZ A;  1WV4 A;  1W3O A;  2I51 A;  3DNH A;  3PFT A;  2D37 A;  4HMT A;  4N7R C;  4YWN A;  2R6V A;  1EJE A;  1Y30 A;  3R5Z A;  2ECR A;  1W3R A;  2ED4 A;  1DNL A;  2Q9K A;  2IG6 A;  1USC A;  1VL7 A;  3BPK A;  3ZOG A;  1I0R A;  3E4V A;  3CB0 A;  5JAB A;  2D5M A;  2X1K A;  4F07 A;  3F7E A;  3HY8 A;  3IN6 A;  2VPA A;  3EC6 A;  3U35 A;  3SWJ A;  3NFW A;  2QCK A;  1G78 A;  2ECU A;  2QEA A;  3VY5 A;  3H96 A;  4Y9I A;  2D36 A;  1YLN A;  3AMF A;  3A6R A;  3ZOC A;  1FLM A;  5ESC A;  3ZOE A;  2HTI A;  3BNK A;  3R5L A;  3U5W A;  3HMZ A;  3A6Q A;  3ZOD A;  2A2J A;  4HMV A;  2HQ9 A;  2OL5 A;  3TGV A;  2HHZ A;  2GJG A;  5CHE C;  2FG9 A;  3RH7 A;  2NR4 A;  3R5Y A;  2FUR A;  2HTD A;  4XHY A;  2R0X A;  1W3Q A;  1YOA A;  3VYA A;  2D38 A;  3GAS A;  5BNC A;  3DB0 A;  5CHO A;  2AQ6 A;  4Z85 A;  1G77 A;  4R82 A;  2IAB A;  2RE7 A;  4IRA A;  2FHQ A;  1CI0 A;  2PTF A;  2HQ7 A;  1G76 A;  1RZ0 A;  3KYF A;  3K87 A;  3R5W A; 
#chains in the Genus database with same CATH topology
 1G79 A;  1WLK A;  2I02 A;  4HKH A;  4XJ2 A;  2X1J A;  1RZ1 A;  3A20 A;  3CP3 A;  3U34 A;  4QVB A;  3VY2 A;  1AXJ A;  1USF A;  2L1T A;  2OU5 A;  1I0S A;  4MTK A;  3U0I A;  3AWH A;  1T9M A;  1XXO A;  4UHV A;  1TY9 A;  2ASF A;  4HMX A;  3FGE A;  4HMS A;  3ZOH A;  4YBN A;  1WGB A;  3DMB A;  1JNW A;  4HMU A;  3B5M A;  3FKH A;  3K86 A;  3R5R A;  3KYG A;  4HX6 A;  3ZOF A;  4ZKY A;  1WLI A;  4HMW A;  1W9A A;  3K88 A;  3R5P A;  1RFE A;  1W3P A;  4L82 A;  2RDE A;  4W64 A;  2IML A;  2E83 A;  1NRG A;  1XHN A;  2P5Z X;  3BA3 A;  1Y12 A;  2ARZ A;  1WV4 A;  1W3O A;  2I51 A;  3DNH A;  3PFT A;  2D37 A;  4HMT A;  4N7R C;  4YWN A;  3V4H A;  2R6V A;  1EJE A;  1Y30 A;  3R5Z A;  2ECR A;  1W3R A;  2ED4 A;  1DNL A;  2Q9K A;  2IG6 A;  4TV4 A;  3EAA A;  1USC A;  1VL7 A;  3BPK A;  3ZOG A;  1I0R A;  3E4V A;  3CB0 A;  2K4Q A;  5JAB A;  2D5M A;  3HE1 A;  2X1K A;  4F07 A;  3F7E A;  3HY8 A;  3IN6 A;  2VPA A;  3EC6 A;  3U35 A;  3SWJ A;  3NFW A;  2QCK A;  1G78 A;  2ECU A;  2QEA A;  3VY5 A;  3H96 A;  4Y9I A;  2D36 A;  1YLN A;  3AMF A;  3A6R A;  3ZOC A;  1FLM A;  5ESC A;  3ZOE A;  2HTI A;  3BNK A;  3R5L A;  3U5W A;  3HMZ A;  3A6Q A;  3ZOD A;  2A2J A;  4HMV A;  2HQ9 A;  2OL5 A;  3TGV A;  2HHZ A;  2GJG A;  5CHE C;  2FG9 A;  3RH7 A;  2NR4 A;  3R5Y A;  2FUR A;  2HTD A;  4XHY A;  2R0X A;  1W3Q A;  1YOA A;  3VYA A;  2D38 A;  3GAS A;  5BNC A;  3DB0 A;  5CHO A;  2AQ6 A;  4Z85 A;  1G77 A;  2GUJ A;  2IAB A;  2RE7 A;  4IRA A;  4R82 A;  2FHQ A;  1CI0 A;  2PTF A;  2HQ7 A;  1G76 A;  1RZ0 A;  3KYF A;  3K87 A;  3R5W A; 
#chains in the Genus database with same CATH homology
 1G79 A;  1WLK A;  2I02 A;  4XJ2 A;  2X1J A;  1RZ1 A;  3A20 A;  3CP3 A;  3U34 A;  4QVB A;  3VY2 A;  1AXJ A;  1USF A;  2OU5 A;  1I0S A;  3U0I A;  3AWH A;  1T9M A;  1XXO A;  1TY9 A;  2ASF A;  4HMX A;  3FGE A;  4HMS A;  3ZOH A;  4YBN A;  1WGB A;  3DMB A;  1JNW A;  4HMU A;  3B5M A;  3FKH A;  3K86 A;  3R5R A;  3KYG A;  4HX6 A;  3ZOF A;  4ZKY A;  1WLI A;  4HMW A;  1W9A A;  3K88 A;  3R5P A;  1RFE A;  1W3P A;  4L82 A;  2RDE A;  2IML A;  2E83 A;  1NRG A;  1XHN A;  3BA3 A;  2ARZ A;  1WV4 A;  1W3O A;  2I51 A;  3DNH A;  3PFT A;  2D37 A;  4HMT A;  4N7R C;  4YWN A;  2R6V A;  1EJE A;  1Y30 A;  3R5Z A;  2ECR A;  1W3R A;  2ED4 A;  1DNL A;  2Q9K A;  2IG6 A;  1USC A;  1VL7 A;  3BPK A;  3ZOG A;  1I0R A;  3E4V A;  3CB0 A;  5JAB A;  2D5M A;  2X1K A;  4F07 A;  3F7E A;  3HY8 A;  3IN6 A;  2VPA A;  3EC6 A;  3U35 A;  3SWJ A;  3NFW A;  2QCK A;  1G78 A;  2ECU A;  2QEA A;  3VY5 A;  3H96 A;  4Y9I A;  2D36 A;  1YLN A;  3AMF A;  3A6R A;  3ZOC A;  1FLM A;  5ESC A;  3ZOE A;  2HTI A;  3BNK A;  3R5L A;  3U5W A;  3HMZ A;  3A6Q A;  3ZOD A;  2A2J A;  4HMV A;  2HQ9 A;  2OL5 A;  3TGV A;  2HHZ A;  2GJG A;  5CHE C;  2FG9 A;  3RH7 A;  2NR4 A;  3R5Y A;  2FUR A;  2HTD A;  4XHY A;  2R0X A;  1W3Q A;  1YOA A;  3VYA A;  2D38 A;  3GAS A;  5BNC A;  3DB0 A;  5CHO A;  2AQ6 A;  4Z85 A;  1G77 A;  4R82 A;  2IAB A;  2RE7 A;  4IRA A;  2FHQ A;  1CI0 A;  2PTF A;  2HQ7 A;  1G76 A;  1RZ0 A;  3KYF A;  3K87 A;  3R5W A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.