1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
4QVBA 4Z85A 3ZOEA 2HHZA 3FKHA 3K86A 3HY8A 3CB0A 4HMTA 5CHOA 3F7EA 2IMLA 2HTIA 4ZKYA 3IN6A 2R0XA 2PTFA 4HMWA 3A20A 2FHQA 1W9AA 3B5MA 2VPAA 4F07A 3GASA 3R5WA 1CI0A 4N7RC 3R5YA 3K88A 1VL7A 2D38A 1W3PA 4YBNA 3TGVA 1Y30A 3ZODA 3DNHA 3HMZA 1XHNA 2ARZA 3BA3A 1G79A 4R82A 3R5ZA 3SWJA 1W3OA 2ED4A 2X1KA 1T9MA 1FLMA 2FG9A 2RE7A 5BNCA 3U5WA 2ASFA 4Y9IA 4HMVA 4XJ2A 2FURA 2ECRA 3VY2A 3DMBA 2HQ9A 3VY5A 2AQ6A 1G77A 3CP3A 1DNLA 3A6QA 2HQ7A 2A2JA 4XHYA 1USFA 3H96A 1I0RA 4HMUA 1USCA 3U35A 1RZ0A 2GJGA 2IG6A 4HX6A 2I02A 5JABA 3ZOGA 1XXOA 3A6RA 2OU5A 3PFTA 3KYGA 3U34A 1JNWA 3BPKA 2I51A 4YWNA 1NRGA 1WGBA 1RFEA 3U0IA 2IABA 2D5MA 2D37A 1W3RA 3ZOFA 1WV4A 2OL5A 2ECUA 1I0SA 3ZOHA 3VYAA 1TY9A 3R5RA 3FGEA 1WLKA 5CHEC 1G78A 2X1JA 1YLNA 5ESCA 2NR4A 1W3QA 1RZ1A 3ZOCA 2QCKA 4HMSA 2RDEA 3KYFA 3BNKA 4HMXA 2Q9KA 3AMFA 2D36A 4IRAA 1AXJA 3RH7A 3DB0A 4L82A 2HTDA 3AWHA 3EC6A 1EJEA 1WLIA 1G76A 3R5PA 2QEAA 3R5LA 3NFWA 3K87A 2E83A 1YOAA 2R6VA 3E4VA
chains in the Genus database with same CATH superfamily
4QVBA 4Z85A 3ZOEA 2HHZA 3FKHA 3K86A 3HY8A 3CB0A 4HMTA 5CHOA 3F7EA 2IMLA 2HTIA 4ZKYA 3IN6A 2R0XA 2PTFA 4HMWA 2GUJA 3A20A 2FHQA 1W9AA 3B5MA 2VPAA 4F07A 3GASA 3R5WA 1CI0A 4N7RC 3R5YA 3K88A 1VL7A 2D38A 1W3PA 4YBNA 3TGVA 1Y30A 4TV4A 3ZODA 3DNHA 3HMZA 1XHNA 4HKHA 2ARZA 3BA3A 1G79A 4R82A 3R5ZA 3SWJA 1W3OA 2ED4A 2X1KA 4W64A 1T9MA 1FLMA 2FG9A 2RE7A 5BNCA 3U5WA 2ASFA 4Y9IA 4HMVA 4XJ2A 2FURA 2ECRA 3VY2A 3DMBA 2HQ9A 1Y12A 3VY5A 2AQ6A 1G77A 3CP3A 1DNLA 3A6QA 2HQ7A 2A2JA 4XHYA 3V4HA 1USFA 3H96A 1I0RA 4HMUA 4UHVA 1USCA 3U35A 1RZ0A 2GJGA 2IG6A 4HX6A 2I02A 5JABA 3ZOGA 1XXOA 3A6RA 2OU5A 3PFTA 3KYGA 3U34A 1JNWA 3BPKA 2I51A 4YWNA 1NRGA 1WGBA 1RFEA 3U0IA 2IABA 2D5MA 2D37A 1W3RA 2P5ZX 3ZOFA 1WV4A 2OL5A 2ECUA 1I0SA 3ZOHA 2K4QA 1TY9A 3VYAA 3R5RA 3FGEA 1WLKA 2L1TA 5CHEC 1G78A 2X1JA 1YLNA 5ESCA 2NR4A 1W3QA 1RZ1A 3ZOCA 2QCKA 4HMSA 2RDEA 3KYFA 3BNKA 4HMXA 2Q9KA 3AMFA 2D36A 3EAAA 4IRAA 1AXJA 3RH7A 3DB0A 4L82A 2HTDA 3AWHA 3EC6A 1EJEA 1WLIA 1G76A 3R5PA 2QEAA 3R5LA 3NFWA 3HE1A 4MTKA 3K87A 2E83A 1YOAA 2R6VA 3E4VA
chains in the Genus database with same CATH topology
4QVBA 4Z85A 3ZOEA 2HHZA 3FKHA 3K86A 3HY8A 3CB0A 4HMTA 5CHOA 3F7EA 2IMLA 2HTIA 4ZKYA 3IN6A 2R0XA 2PTFA 4HMWA 3A20A 2FHQA 1W9AA 3B5MA 2VPAA 4F07A 3GASA 3R5WA 1CI0A 4N7RC 3R5YA 3K88A 1VL7A 2D38A 1W3PA 4YBNA 3TGVA 1Y30A 3ZODA 3DNHA 3HMZA 1XHNA 2ARZA 3BA3A 1G79A 4R82A 3R5ZA 3SWJA 1W3OA 2ED4A 2X1KA 1T9MA 1FLMA 2FG9A 2RE7A 5BNCA 3U5WA 2ASFA 4Y9IA 4HMVA 4XJ2A 2FURA 2ECRA 3VY2A 3DMBA 2HQ9A 3VY5A 2AQ6A 1G77A 3CP3A 1DNLA 3A6QA 2HQ7A 2A2JA 4XHYA 1USFA 3H96A 1I0RA 4HMUA 1USCA 3U35A 1RZ0A 2GJGA 2IG6A 4HX6A 2I02A 5JABA 3ZOGA 1XXOA 3A6RA 2OU5A 3PFTA 3KYGA 3U34A 1JNWA 3BPKA 2I51A 4YWNA 1NRGA 1WGBA 1RFEA 3U0IA 2IABA 2D5MA 2D37A 1W3RA 3ZOFA 1WV4A 2OL5A 2ECUA 1I0SA 3ZOHA 3VYAA 1TY9A 3R5RA 3FGEA 1WLKA 5CHEC 1G78A 2X1JA 1YLNA 5ESCA 2NR4A 1W3QA 1RZ1A 3ZOCA 2QCKA 4HMSA 2RDEA 3KYFA 3BNKA 4HMXA 2Q9KA 3AMFA 2D36A 4IRAA 1AXJA 3RH7A 3DB0A 4L82A 2HTDA 3AWHA 3EC6A 1EJEA 1WLIA 1G76A 3R5PA 2QEAA 3R5LA 3NFWA 3K87A 2E83A 1YOAA 2R6VA 3E4VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QVB A;  4Z85 A;  3ZOE A;  2HHZ A;  3FKH A;  3K86 A;  3HY8 A;  3CB0 A;  4HMT A;  5CHO A;  3F7E A;  2IML A;  2HTI A;  4ZKY A;  3IN6 A;  2R0X A;  2PTF A;  4HMW A;  3A20 A;  2FHQ A;  1W9A A;  3B5M A;  2VPA A;  4F07 A;  3GAS A;  3R5W A;  1CI0 A;  4N7R C;  3R5Y A;  3K88 A;  1VL7 A;  2D38 A;  1W3P A;  4YBN A;  3TGV A;  1Y30 A;  3ZOD A;  3DNH A;  3HMZ A;  1XHN A;  2ARZ A;  3BA3 A;  1G79 A;  4R82 A;  3R5Z A;  3SWJ A;  1W3O A;  2ED4 A;  2X1K A;  1T9M A;  1FLM A;  2FG9 A;  2RE7 A;  5BNC A;  3U5W A;  2ASF A;  4Y9I A;  4HMV A;  4XJ2 A;  2FUR A;  2ECR A;  3VY2 A;  3DMB A;  2HQ9 A;  3VY5 A;  2AQ6 A;  1G77 A;  3CP3 A;  1DNL A;  3A6Q A;  2HQ7 A;  2A2J A;  4XHY A;  1USF A;  3H96 A;  1I0R A;  4HMU A;  1USC A;  3U35 A;  1RZ0 A;  2GJG A;  2IG6 A;  4HX6 A;  2I02 A;  5JAB A;  3ZOG A;  1XXO A;  3A6R A;  2OU5 A;  3PFT A;  3KYG A;  3U34 A;  1JNW A;  3BPK A;  2I51 A;  4YWN A;  1NRG A;  1WGB A;  1RFE A;  3U0I A;  2IAB A;  2D5M A;  2D37 A;  1W3R A;  3ZOF A;  1WV4 A;  2OL5 A;  2ECU A;  1I0S A;  3ZOH A;  3VYA A;  1TY9 A;  3R5R A;  3FGE A;  1WLK A;  5CHE C;  1G78 A;  2X1J A;  1YLN A;  5ESC A;  2NR4 A;  1W3Q A;  1RZ1 A;  3ZOC A;  2QCK A;  4HMS A;  2RDE A;  3KYF A;  3BNK A;  4HMX A;  2Q9K A;  3AMF A;  2D36 A;  4IRA A;  1AXJ A;  3RH7 A;  3DB0 A;  4L82 A;  2HTD A;  3AWH A;  3EC6 A;  1EJE A;  1WLI A;  1G76 A;  3R5P A;  2QEA A;  3R5L A;  3NFW A;  3K87 A;  2E83 A;  1YOA A;  2R6V A;  3E4V A; 
#chains in the Genus database with same CATH topology
 4QVB A;  4Z85 A;  3ZOE A;  2HHZ A;  3FKH A;  3K86 A;  3HY8 A;  3CB0 A;  4HMT A;  5CHO A;  3F7E A;  2IML A;  2HTI A;  4ZKY A;  3IN6 A;  2R0X A;  2PTF A;  4HMW A;  2GUJ A;  3A20 A;  2FHQ A;  1W9A A;  3B5M A;  2VPA A;  4F07 A;  3GAS A;  3R5W A;  1CI0 A;  4N7R C;  3R5Y A;  3K88 A;  1VL7 A;  2D38 A;  1W3P A;  4YBN A;  3TGV A;  1Y30 A;  4TV4 A;  3ZOD A;  3DNH A;  3HMZ A;  1XHN A;  4HKH A;  2ARZ A;  3BA3 A;  1G79 A;  4R82 A;  3R5Z A;  3SWJ A;  1W3O A;  2ED4 A;  2X1K A;  4W64 A;  1T9M A;  1FLM A;  2FG9 A;  2RE7 A;  5BNC A;  3U5W A;  2ASF A;  4Y9I A;  4HMV A;  4XJ2 A;  2FUR A;  2ECR A;  3VY2 A;  3DMB A;  2HQ9 A;  1Y12 A;  3VY5 A;  2AQ6 A;  1G77 A;  3CP3 A;  1DNL A;  3A6Q A;  2HQ7 A;  2A2J A;  4XHY A;  3V4H A;  1USF A;  3H96 A;  1I0R A;  4HMU A;  4UHV A;  1USC A;  3U35 A;  1RZ0 A;  2GJG A;  2IG6 A;  4HX6 A;  2I02 A;  5JAB A;  3ZOG A;  1XXO A;  3A6R A;  2OU5 A;  3PFT A;  3KYG A;  3U34 A;  1JNW A;  3BPK A;  2I51 A;  4YWN A;  1NRG A;  1WGB A;  1RFE A;  3U0I A;  2IAB A;  2D5M A;  2D37 A;  1W3R A;  2P5Z X;  3ZOF A;  1WV4 A;  2OL5 A;  2ECU A;  1I0S A;  3ZOH A;  2K4Q A;  1TY9 A;  3VYA A;  3R5R A;  3FGE A;  1WLK A;  2L1T A;  5CHE C;  1G78 A;  2X1J A;  1YLN A;  5ESC A;  2NR4 A;  1W3Q A;  1RZ1 A;  3ZOC A;  2QCK A;  4HMS A;  2RDE A;  3KYF A;  3BNK A;  4HMX A;  2Q9K A;  3AMF A;  2D36 A;  3EAA A;  4IRA A;  1AXJ A;  3RH7 A;  3DB0 A;  4L82 A;  2HTD A;  3AWH A;  3EC6 A;  1EJE A;  1WLI A;  1G76 A;  3R5P A;  2QEA A;  3R5L A;  3NFW A;  3HE1 A;  4MTK A;  3K87 A;  2E83 A;  1YOA A;  2R6V A;  3E4V A; 
#chains in the Genus database with same CATH homology
 4QVB A;  4Z85 A;  3ZOE A;  2HHZ A;  3FKH A;  3K86 A;  3HY8 A;  3CB0 A;  4HMT A;  5CHO A;  3F7E A;  2IML A;  2HTI A;  4ZKY A;  3IN6 A;  2R0X A;  2PTF A;  4HMW A;  3A20 A;  2FHQ A;  1W9A A;  3B5M A;  2VPA A;  4F07 A;  3GAS A;  3R5W A;  1CI0 A;  4N7R C;  3R5Y A;  3K88 A;  1VL7 A;  2D38 A;  1W3P A;  4YBN A;  3TGV A;  1Y30 A;  3ZOD A;  3DNH A;  3HMZ A;  1XHN A;  2ARZ A;  3BA3 A;  1G79 A;  4R82 A;  3R5Z A;  3SWJ A;  1W3O A;  2ED4 A;  2X1K A;  1T9M A;  1FLM A;  2FG9 A;  2RE7 A;  5BNC A;  3U5W A;  2ASF A;  4Y9I A;  4HMV A;  4XJ2 A;  2FUR A;  2ECR A;  3VY2 A;  3DMB A;  2HQ9 A;  3VY5 A;  2AQ6 A;  1G77 A;  3CP3 A;  1DNL A;  3A6Q A;  2HQ7 A;  2A2J A;  4XHY A;  1USF A;  3H96 A;  1I0R A;  4HMU A;  1USC A;  3U35 A;  1RZ0 A;  2GJG A;  2IG6 A;  4HX6 A;  2I02 A;  5JAB A;  3ZOG A;  1XXO A;  3A6R A;  2OU5 A;  3PFT A;  3KYG A;  3U34 A;  1JNW A;  3BPK A;  2I51 A;  4YWN A;  1NRG A;  1WGB A;  1RFE A;  3U0I A;  2IAB A;  2D5M A;  2D37 A;  1W3R A;  3ZOF A;  1WV4 A;  2OL5 A;  2ECU A;  1I0S A;  3ZOH A;  3VYA A;  1TY9 A;  3R5R A;  3FGE A;  1WLK A;  5CHE C;  1G78 A;  2X1J A;  1YLN A;  5ESC A;  2NR4 A;  1W3Q A;  1RZ1 A;  3ZOC A;  2QCK A;  4HMS A;  2RDE A;  3KYF A;  3BNK A;  4HMX A;  2Q9K A;  3AMF A;  2D36 A;  4IRA A;  1AXJ A;  3RH7 A;  3DB0 A;  4L82 A;  2HTD A;  3AWH A;  3EC6 A;  1EJE A;  1WLI A;  1G76 A;  3R5P A;  2QEA A;  3R5L A;  3NFW A;  3K87 A;  2E83 A;  1YOA A;  2R6V A;  3E4V A; 
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similar chains in the Genus database (?% sequence similarity)
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