1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
2FG9A 3SWJA 2HTIA 4F07A 2VPAA 4XJ2A 2I02A 3BA3A 2ASFA 3R5PA 3R5ZA 3BPKA 3VYAA 1RZ0A 1G76A 1FLMA 2X1JA 3AWHA 1WGBA 3FGEA 4Y9IA 1G79A 3HMZA 3TGVA 5ESCA 1T9MA 2HTDA 3PFTA 2NR4A 2OU5A 2D38A 2RDEA 3A6RA 4ZKYA 2E83A 1W3QA 2IG6A 3CB0A 2D36A 1W3RA 3R5LA 2IMLA 1VL7A 1G78A 1EJEA 4QVBA 1YOAA 2R6VA 3R5RA 2HQ7A 3A6QA 4N7RC 5BNCA 2FURA 4YWNA 2ARZA 3RH7A 3ZOHA 3NFWA 3FKHA 2ECUA 1I0SA 1USFA 2I51A 3A20A 1G77A 2RE7A 3U35A 4HMXA 4IRAA 3KYFA 4L82A 5CHEC 3U34A 2OL5A 2Q9KA 2ED4A 2GJGA 2ECRA 2HQ9A 1CI0A 1AXJA 1WLIA 3DB0A 4HMUA 5JABA 3K88A 1WLKA 2QEAA 5CHOA 2PTFA 2QCKA 3CP3A 2HHZA 3F7EA 3K87A 3VY5A 1NRGA 3ZOCA 3ZOFA 1XHNA 3ZODA 1RZ1A 3R5WA 3BNKA 3K86A 3B5MA 4HX6A 3U0IA 3HY8A 1I0RA 3ZOGA 4HMTA 3E4VA 3GASA 3EC6A 1XXOA 2AQ6A 4Z85A 1RFEA 3U5WA 2FHQA 4HMVA 1W3PA 4XHYA 1WV4A 2D5MA 1YLNA 3KYGA 3ZOEA 1W9AA 2R0XA 4HMWA 3VY2A 1JNWA 4R82A 1DNLA 2X1KA 3DMBA 1TY9A 3IN6A 4HMSA 4YBNA 3AMFA 1USCA 1W3OA 1Y30A 2A2JA 2IABA 3H96A 3R5YA 3DNHA 2D37A
chains in the Genus database with same CATH superfamily
2FG9A 3SWJA 3V4HA 2HTIA 4F07A 2VPAA 4XJ2A 2I02A 3BA3A 2ASFA 3R5PA 3R5ZA 3BPKA 3VYAA 1RZ0A 1G76A 1FLMA 2X1JA 3AWHA 3HE1A 1WGBA 3FGEA 4Y9IA 4TV4A 1G79A 3HMZA 4W64A 3TGVA 5ESCA 1T9MA 3EAAA 2HTDA 3PFTA 2NR4A 2OU5A 2D38A 2RDEA 3A6RA 4ZKYA 4UHVA 2E83A 1W3QA 2IG6A 3CB0A 2D36A 1W3RA 3R5LA 2IMLA 1VL7A 1G78A 1EJEA 4QVBA 1YOAA 2R6VA 3R5RA 2HQ7A 3A6QA 4N7RC 5BNCA 2FURA 4YWNA 2ARZA 3RH7A 3ZOHA 3NFWA 2L1TA 3FKHA 2ECUA 1I0SA 1USFA 2GUJA 2I51A 3A20A 1G77A 2RE7A 4HKHA 3U35A 4HMXA 4IRAA 3KYFA 4L82A 4MTKA 5CHEC 3U34A 2OL5A 2Q9KA 2ED4A 2GJGA 2ECRA 2HQ9A 1CI0A 1AXJA 1WLIA 3DB0A 4HMUA 5JABA 3K88A 2K4QA 1WLKA 2QEAA 5CHOA 2PTFA 2QCKA 3CP3A 2HHZA 3F7EA 3K87A 3VY5A 1NRGA 3ZOCA 3ZOFA 1XHNA 3ZODA 1RZ1A 3R5WA 3BNKA 3K86A 3B5MA 4HX6A 3U0IA 3HY8A 1I0RA 3ZOGA 1Y12A 4HMTA 3E4VA 2P5ZX 3GASA 3EC6A 1XXOA 2AQ6A 4Z85A 1RFEA 3U5WA 2FHQA 4HMVA 1W3PA 4XHYA 1WV4A 2D5MA 1YLNA 3KYGA 3ZOEA 1W9AA 2R0XA 4HMWA 3VY2A 1JNWA 4R82A 1DNLA 2X1KA 3DMBA 1TY9A 3IN6A 4HMSA 4YBNA 3AMFA 1USCA 1W3OA 1Y30A 2A2JA 2IABA 3H96A 3R5YA 3DNHA 2D37A
chains in the Genus database with same CATH topology
2FG9A 3SWJA 2HTIA 4F07A 2VPAA 4XJ2A 2I02A 3BA3A 2ASFA 3R5PA 3R5ZA 3BPKA 3VYAA 1RZ0A 1G76A 1FLMA 2X1JA 3AWHA 1WGBA 3FGEA 4Y9IA 1G79A 3HMZA 3TGVA 5ESCA 1T9MA 2HTDA 3PFTA 2NR4A 2OU5A 2D38A 2RDEA 3A6RA 4ZKYA 2E83A 1W3QA 2IG6A 3CB0A 2D36A 1W3RA 3R5LA 2IMLA 1VL7A 1G78A 1EJEA 4QVBA 1YOAA 2R6VA 3R5RA 2HQ7A 3A6QA 4N7RC 5BNCA 2FURA 4YWNA 2ARZA 3RH7A 3ZOHA 3NFWA 3FKHA 2ECUA 1I0SA 1USFA 2I51A 3A20A 1G77A 2RE7A 3U35A 4HMXA 4IRAA 3KYFA 4L82A 5CHEC 3U34A 2OL5A 2Q9KA 2ED4A 2GJGA 2ECRA 2HQ9A 1CI0A 1AXJA 1WLIA 3DB0A 4HMUA 5JABA 3K88A 1WLKA 2QEAA 5CHOA 2PTFA 2QCKA 3CP3A 2HHZA 3F7EA 3K87A 3VY5A 1NRGA 3ZOCA 3ZOFA 1XHNA 3ZODA 1RZ1A 3R5WA 3BNKA 3K86A 3B5MA 4HX6A 3U0IA 3HY8A 1I0RA 3ZOGA 4HMTA 3E4VA 3GASA 3EC6A 1XXOA 2AQ6A 4Z85A 1RFEA 3U5WA 2FHQA 4HMVA 1W3PA 4XHYA 1WV4A 2D5MA 1YLNA 3KYGA 3ZOEA 1W9AA 2R0XA 4HMWA 3VY2A 1JNWA 4R82A 1DNLA 2X1KA 3DMBA 1TY9A 3IN6A 4HMSA 4YBNA 3AMFA 1USCA 1W3OA 1Y30A 2A2JA 2IABA 3H96A 3R5YA 3DNHA 2D37A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FG9 A;  3SWJ A;  2HTI A;  4F07 A;  2VPA A;  4XJ2 A;  2I02 A;  3BA3 A;  2ASF A;  3R5P A;  3R5Z A;  3BPK A;  3VYA A;  1RZ0 A;  1G76 A;  1FLM A;  2X1J A;  3AWH A;  1WGB A;  3FGE A;  4Y9I A;  1G79 A;  3HMZ A;  3TGV A;  5ESC A;  1T9M A;  2HTD A;  3PFT A;  2NR4 A;  2OU5 A;  2D38 A;  2RDE A;  3A6R A;  4ZKY A;  2E83 A;  1W3Q A;  2IG6 A;  3CB0 A;  2D36 A;  1W3R A;  3R5L A;  2IML A;  1VL7 A;  1G78 A;  1EJE A;  4QVB A;  1YOA A;  2R6V A;  3R5R A;  2HQ7 A;  3A6Q A;  4N7R C;  5BNC A;  2FUR A;  4YWN A;  2ARZ A;  3RH7 A;  3ZOH A;  3NFW A;  3FKH A;  2ECU A;  1I0S A;  1USF A;  2I51 A;  3A20 A;  1G77 A;  2RE7 A;  3U35 A;  4HMX A;  4IRA A;  3KYF A;  4L82 A;  5CHE C;  3U34 A;  2OL5 A;  2Q9K A;  2ED4 A;  2GJG A;  2ECR A;  2HQ9 A;  1CI0 A;  1AXJ A;  1WLI A;  3DB0 A;  4HMU A;  5JAB A;  3K88 A;  1WLK A;  2QEA A;  5CHO A;  2PTF A;  2QCK A;  3CP3 A;  2HHZ A;  3F7E A;  3K87 A;  3VY5 A;  1NRG A;  3ZOC A;  3ZOF A;  1XHN A;  3ZOD A;  1RZ1 A;  3R5W A;  3BNK A;  3K86 A;  3B5M A;  4HX6 A;  3U0I A;  3HY8 A;  1I0R A;  3ZOG A;  4HMT A;  3E4V A;  3GAS A;  3EC6 A;  1XXO A;  2AQ6 A;  4Z85 A;  1RFE A;  3U5W A;  2FHQ A;  4HMV A;  1W3P A;  4XHY A;  1WV4 A;  2D5M A;  1YLN A;  3KYG A;  3ZOE A;  1W9A A;  2R0X A;  4HMW A;  3VY2 A;  1JNW A;  4R82 A;  1DNL A;  2X1K A;  3DMB A;  1TY9 A;  3IN6 A;  4HMS A;  4YBN A;  3AMF A;  1USC A;  1W3O A;  1Y30 A;  2A2J A;  2IAB A;  3H96 A;  3R5Y A;  3DNH A;  2D37 A; 
#chains in the Genus database with same CATH topology
 2FG9 A;  3SWJ A;  3V4H A;  2HTI A;  4F07 A;  2VPA A;  4XJ2 A;  2I02 A;  3BA3 A;  2ASF A;  3R5P A;  3R5Z A;  3BPK A;  3VYA A;  1RZ0 A;  1G76 A;  1FLM A;  2X1J A;  3AWH A;  3HE1 A;  1WGB A;  3FGE A;  4Y9I A;  4TV4 A;  1G79 A;  3HMZ A;  4W64 A;  3TGV A;  5ESC A;  1T9M A;  3EAA A;  2HTD A;  3PFT A;  2NR4 A;  2OU5 A;  2D38 A;  2RDE A;  3A6R A;  4ZKY A;  4UHV A;  2E83 A;  1W3Q A;  2IG6 A;  3CB0 A;  2D36 A;  1W3R A;  3R5L A;  2IML A;  1VL7 A;  1G78 A;  1EJE A;  4QVB A;  1YOA A;  2R6V A;  3R5R A;  2HQ7 A;  3A6Q A;  4N7R C;  5BNC A;  2FUR A;  4YWN A;  2ARZ A;  3RH7 A;  3ZOH A;  3NFW A;  2L1T A;  3FKH A;  2ECU A;  1I0S A;  1USF A;  2GUJ A;  2I51 A;  3A20 A;  1G77 A;  2RE7 A;  4HKH A;  3U35 A;  4HMX A;  4IRA A;  3KYF A;  4L82 A;  4MTK A;  5CHE C;  3U34 A;  2OL5 A;  2Q9K A;  2ED4 A;  2GJG A;  2ECR A;  2HQ9 A;  1CI0 A;  1AXJ A;  1WLI A;  3DB0 A;  4HMU A;  5JAB A;  3K88 A;  2K4Q A;  1WLK A;  2QEA A;  5CHO A;  2PTF A;  2QCK A;  3CP3 A;  2HHZ A;  3F7E A;  3K87 A;  3VY5 A;  1NRG A;  3ZOC A;  3ZOF A;  1XHN A;  3ZOD A;  1RZ1 A;  3R5W A;  3BNK A;  3K86 A;  3B5M A;  4HX6 A;  3U0I A;  3HY8 A;  1I0R A;  3ZOG A;  1Y12 A;  4HMT A;  3E4V A;  2P5Z X;  3GAS A;  3EC6 A;  1XXO A;  2AQ6 A;  4Z85 A;  1RFE A;  3U5W A;  2FHQ A;  4HMV A;  1W3P A;  4XHY A;  1WV4 A;  2D5M A;  1YLN A;  3KYG A;  3ZOE A;  1W9A A;  2R0X A;  4HMW A;  3VY2 A;  1JNW A;  4R82 A;  1DNL A;  2X1K A;  3DMB A;  1TY9 A;  3IN6 A;  4HMS A;  4YBN A;  3AMF A;  1USC A;  1W3O A;  1Y30 A;  2A2J A;  2IAB A;  3H96 A;  3R5Y A;  3DNH A;  2D37 A; 
#chains in the Genus database with same CATH homology
 2FG9 A;  3SWJ A;  2HTI A;  4F07 A;  2VPA A;  4XJ2 A;  2I02 A;  3BA3 A;  2ASF A;  3R5P A;  3R5Z A;  3BPK A;  3VYA A;  1RZ0 A;  1G76 A;  1FLM A;  2X1J A;  3AWH A;  1WGB A;  3FGE A;  4Y9I A;  1G79 A;  3HMZ A;  3TGV A;  5ESC A;  1T9M A;  2HTD A;  3PFT A;  2NR4 A;  2OU5 A;  2D38 A;  2RDE A;  3A6R A;  4ZKY A;  2E83 A;  1W3Q A;  2IG6 A;  3CB0 A;  2D36 A;  1W3R A;  3R5L A;  2IML A;  1VL7 A;  1G78 A;  1EJE A;  4QVB A;  1YOA A;  2R6V A;  3R5R A;  2HQ7 A;  3A6Q A;  4N7R C;  5BNC A;  2FUR A;  4YWN A;  2ARZ A;  3RH7 A;  3ZOH A;  3NFW A;  3FKH A;  2ECU A;  1I0S A;  1USF A;  2I51 A;  3A20 A;  1G77 A;  2RE7 A;  3U35 A;  4HMX A;  4IRA A;  3KYF A;  4L82 A;  5CHE C;  3U34 A;  2OL5 A;  2Q9K A;  2ED4 A;  2GJG A;  2ECR A;  2HQ9 A;  1CI0 A;  1AXJ A;  1WLI A;  3DB0 A;  4HMU A;  5JAB A;  3K88 A;  1WLK A;  2QEA A;  5CHO A;  2PTF A;  2QCK A;  3CP3 A;  2HHZ A;  3F7E A;  3K87 A;  3VY5 A;  1NRG A;  3ZOC A;  3ZOF A;  1XHN A;  3ZOD A;  1RZ1 A;  3R5W A;  3BNK A;  3K86 A;  3B5M A;  4HX6 A;  3U0I A;  3HY8 A;  1I0R A;  3ZOG A;  4HMT A;  3E4V A;  3GAS A;  3EC6 A;  1XXO A;  2AQ6 A;  4Z85 A;  1RFE A;  3U5W A;  2FHQ A;  4HMV A;  1W3P A;  4XHY A;  1WV4 A;  2D5M A;  1YLN A;  3KYG A;  3ZOE A;  1W9A A;  2R0X A;  4HMW A;  3VY2 A;  1JNW A;  4R82 A;  1DNL A;  2X1K A;  3DMB A;  1TY9 A;  3IN6 A;  4HMS A;  4YBN A;  3AMF A;  1USC A;  1W3O A;  1Y30 A;  2A2J A;  2IAB A;  3H96 A;  3R5Y A;  3DNH A;  2D37 A; 
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similar chains in the Genus database (?% sequence similarity)
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