1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
2RDEA 4XJ2A 4HMUA 3B5MA 5JABA 1VL7A 2D37A 2ARZA 2D36A 2ECUA 3BPKA 2HTIA 3PFTA 1XHNA 1EJEA 3IN6A 3R5YA 3U0IA 3BA3A 4YBNA 1G79A 1Y30A 3FKHA 4HMTA 2AQ6A 1RFEA 2IG6A 1I0RA 2HHZA 1USCA 1G76A 1WLIA 3EC6A 3F7EA 1W3RA 1W3QA 4N7RC 1G78A 1G77A 2QEAA 3CB0A 1CI0A 3ZOFA 2QCKA 2D38A 3K88A 2NR4A 3A6RA 1WLKA 2FURA 2HQ9A 3ZODA 2ASFA 3SWJA 2FG9A 1WGBA 4Y9IA 1DNLA 3HY8A 1USFA 3U34A 3DMBA 3H96A 2IABA 3R5LA 4IRAA 1YLNA 4R82A 4F07A 3FGEA 2ED4A 4L82A 3NFWA 2D5MA 3RH7A 2I51A 2ECRA 3R5ZA 1JNWA 2GJGA 4QVBA 3VY5A 1W9AA 3DB0A 3R5PA 3A6QA 3U35A 2HQ7A 1YOAA 2PTFA 4HMWA 2OL5A 2E83A 1AXJA 1XXOA 2R0XA 4HMXA 1NRGA 5CHOA 3ZOCA 1WV4A 3VYAA 4YWNA 3BNKA 1RZ1A 3CP3A 2FHQA 3GASA 3K87A 3VY2A 1T9MA 1W3OA 4HMSA 1TY9A 3HMZA 3DNHA 3K86A 4ZKYA 3ZOHA 5BNCA 2IMLA 2RE7A 2A2JA 3KYFA 3TGVA 2X1KA 3A20A 1W3PA 4HMVA 1FLMA 5ESCA 1I0SA 3AMFA 3U5WA 2HTDA 2OU5A 2VPAA 3AWHA 3KYGA 2I02A 5CHEC 4HX6A 3ZOGA 2Q9KA 4XHYA 2X1JA 4Z85A 1RZ0A 3R5WA 3E4VA 3R5RA 3ZOEA 2R6VA
chains in the Genus database with same CATH superfamily
2RDEA 4XJ2A 4HMUA 3B5MA 2P5ZX 5JABA 1VL7A 2D37A 3V4HA 2ARZA 2K4QA 2D36A 2ECUA 3BPKA 2HTIA 3PFTA 1XHNA 1EJEA 3IN6A 3R5YA 3U0IA 3BA3A 4YBNA 1G79A 1Y30A 3FKHA 4HMTA 2AQ6A 1RFEA 2IG6A 1I0RA 2HHZA 1USCA 1G76A 1WLIA 3EC6A 3F7EA 1W3RA 1W3QA 4N7RC 1G78A 1G77A 2QEAA 3CB0A 1CI0A 3ZOFA 2QCKA 2D38A 3K88A 2NR4A 3A6RA 1WLKA 2FURA 2HQ9A 3ZODA 2ASFA 3SWJA 2FG9A 1WGBA 4Y9IA 1DNLA 3HY8A 1USFA 3U34A 3DMBA 3H96A 2IABA 4UHVA 3R5LA 4IRAA 1YLNA 4R82A 3HE1A 3FGEA 4F07A 2ED4A 4L82A 3NFWA 2D5MA 3RH7A 2I51A 2ECRA 3R5ZA 1JNWA 2GJGA 4QVBA 3VY5A 4HKHA 1W9AA 3DB0A 3R5PA 3A6QA 3U35A 2HQ7A 1YOAA 2PTFA 4HMWA 2OL5A 2E83A 3EAAA 1AXJA 1XXOA 2R0XA 4MTKA 4HMXA 1NRGA 5CHOA 3ZOCA 1WV4A 3VYAA 1Y12A 4YWNA 3BNKA 1RZ1A 3CP3A 2FHQA 3GASA 3K87A 3VY2A 1T9MA 1W3OA 4HMSA 1TY9A 3HMZA 3DNHA 3K86A 2GUJA 4ZKYA 3ZOHA 5BNCA 2IMLA 4TV4A 2RE7A 2A2JA 3KYFA 3TGVA 2X1KA 3A20A 1W3PA 4HMVA 1FLMA 5ESCA 1I0SA 3AMFA 3U5WA 2HTDA 2OU5A 2VPAA 3AWHA 3KYGA 2I02A 5CHEC 4HX6A 3ZOGA 2Q9KA 4XHYA 2X1JA 4Z85A 1RZ0A 3R5WA 3E4VA 3R5RA 3ZOEA 4W64A 2L1TA 2R6VA
chains in the Genus database with same CATH topology
2RDEA 4XJ2A 4HMUA 3B5MA 5JABA 1VL7A 2D37A 2ARZA 2D36A 2ECUA 3BPKA 2HTIA 3PFTA 1XHNA 1EJEA 3IN6A 3R5YA 3U0IA 3BA3A 4YBNA 1G79A 1Y30A 3FKHA 4HMTA 2AQ6A 1RFEA 2IG6A 1I0RA 2HHZA 1USCA 1G76A 1WLIA 3EC6A 3F7EA 1W3RA 1W3QA 4N7RC 1G78A 1G77A 2QEAA 3CB0A 1CI0A 3ZOFA 2QCKA 2D38A 3K88A 2NR4A 3A6RA 1WLKA 2FURA 2HQ9A 3ZODA 2ASFA 3SWJA 2FG9A 1WGBA 4Y9IA 1DNLA 3HY8A 1USFA 3U34A 3DMBA 3H96A 2IABA 3R5LA 4IRAA 1YLNA 4R82A 4F07A 3FGEA 2ED4A 4L82A 3NFWA 2D5MA 3RH7A 2I51A 2ECRA 3R5ZA 1JNWA 2GJGA 4QVBA 3VY5A 1W9AA 3DB0A 3R5PA 3A6QA 3U35A 2HQ7A 1YOAA 2PTFA 4HMWA 2OL5A 2E83A 1AXJA 1XXOA 2R0XA 4HMXA 1NRGA 5CHOA 3ZOCA 1WV4A 3VYAA 4YWNA 3BNKA 1RZ1A 3CP3A 2FHQA 3GASA 3K87A 3VY2A 1T9MA 1W3OA 4HMSA 1TY9A 3HMZA 3DNHA 3K86A 4ZKYA 3ZOHA 5BNCA 2IMLA 2RE7A 2A2JA 3KYFA 3TGVA 2X1KA 3A20A 1W3PA 4HMVA 1FLMA 5ESCA 1I0SA 3AMFA 3U5WA 2HTDA 2OU5A 2VPAA 3AWHA 3KYGA 2I02A 5CHEC 4HX6A 3ZOGA 2Q9KA 4XHYA 2X1JA 4Z85A 1RZ0A 3R5WA 3E4VA 3R5RA 3ZOEA 2R6VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RDE A;  4XJ2 A;  4HMU A;  3B5M A;  5JAB A;  1VL7 A;  2D37 A;  2ARZ A;  2D36 A;  2ECU A;  3BPK A;  2HTI A;  3PFT A;  1XHN A;  1EJE A;  3IN6 A;  3R5Y A;  3U0I A;  3BA3 A;  4YBN A;  1G79 A;  1Y30 A;  3FKH A;  4HMT A;  2AQ6 A;  1RFE A;  2IG6 A;  1I0R A;  2HHZ A;  1USC A;  1G76 A;  1WLI A;  3EC6 A;  3F7E A;  1W3R A;  1W3Q A;  4N7R C;  1G78 A;  1G77 A;  2QEA A;  3CB0 A;  1CI0 A;  3ZOF A;  2QCK A;  2D38 A;  3K88 A;  2NR4 A;  3A6R A;  1WLK A;  2FUR A;  2HQ9 A;  3ZOD A;  2ASF A;  3SWJ A;  2FG9 A;  1WGB A;  4Y9I A;  1DNL A;  3HY8 A;  1USF A;  3U34 A;  3DMB A;  3H96 A;  2IAB A;  3R5L A;  4IRA A;  1YLN A;  4R82 A;  4F07 A;  3FGE A;  2ED4 A;  4L82 A;  3NFW A;  2D5M A;  3RH7 A;  2I51 A;  2ECR A;  3R5Z A;  1JNW A;  2GJG A;  4QVB A;  3VY5 A;  1W9A A;  3DB0 A;  3R5P A;  3A6Q A;  3U35 A;  2HQ7 A;  1YOA A;  2PTF A;  4HMW A;  2OL5 A;  2E83 A;  1AXJ A;  1XXO A;  2R0X A;  4HMX A;  1NRG A;  5CHO A;  3ZOC A;  1WV4 A;  3VYA A;  4YWN A;  3BNK A;  1RZ1 A;  3CP3 A;  2FHQ A;  3GAS A;  3K87 A;  3VY2 A;  1T9M A;  1W3O A;  4HMS A;  1TY9 A;  3HMZ A;  3DNH A;  3K86 A;  4ZKY A;  3ZOH A;  5BNC A;  2IML A;  2RE7 A;  2A2J A;  3KYF A;  3TGV A;  2X1K A;  3A20 A;  1W3P A;  4HMV A;  1FLM A;  5ESC A;  1I0S A;  3AMF A;  3U5W A;  2HTD A;  2OU5 A;  2VPA A;  3AWH A;  3KYG A;  2I02 A;  5CHE C;  4HX6 A;  3ZOG A;  2Q9K A;  4XHY A;  2X1J A;  4Z85 A;  1RZ0 A;  3R5W A;  3E4V A;  3R5R A;  3ZOE A;  2R6V A; 
#chains in the Genus database with same CATH topology
 2RDE A;  4XJ2 A;  4HMU A;  3B5M A;  2P5Z X;  5JAB A;  1VL7 A;  2D37 A;  3V4H A;  2ARZ A;  2K4Q A;  2D36 A;  2ECU A;  3BPK A;  2HTI A;  3PFT A;  1XHN A;  1EJE A;  3IN6 A;  3R5Y A;  3U0I A;  3BA3 A;  4YBN A;  1G79 A;  1Y30 A;  3FKH A;  4HMT A;  2AQ6 A;  1RFE A;  2IG6 A;  1I0R A;  2HHZ A;  1USC A;  1G76 A;  1WLI A;  3EC6 A;  3F7E A;  1W3R A;  1W3Q A;  4N7R C;  1G78 A;  1G77 A;  2QEA A;  3CB0 A;  1CI0 A;  3ZOF A;  2QCK A;  2D38 A;  3K88 A;  2NR4 A;  3A6R A;  1WLK A;  2FUR A;  2HQ9 A;  3ZOD A;  2ASF A;  3SWJ A;  2FG9 A;  1WGB A;  4Y9I A;  1DNL A;  3HY8 A;  1USF A;  3U34 A;  3DMB A;  3H96 A;  2IAB A;  4UHV A;  3R5L A;  4IRA A;  1YLN A;  4R82 A;  3HE1 A;  3FGE A;  4F07 A;  2ED4 A;  4L82 A;  3NFW A;  2D5M A;  3RH7 A;  2I51 A;  2ECR A;  3R5Z A;  1JNW A;  2GJG A;  4QVB A;  3VY5 A;  4HKH A;  1W9A A;  3DB0 A;  3R5P A;  3A6Q A;  3U35 A;  2HQ7 A;  1YOA A;  2PTF A;  4HMW A;  2OL5 A;  2E83 A;  3EAA A;  1AXJ A;  1XXO A;  2R0X A;  4MTK A;  4HMX A;  1NRG A;  5CHO A;  3ZOC A;  1WV4 A;  3VYA A;  1Y12 A;  4YWN A;  3BNK A;  1RZ1 A;  3CP3 A;  2FHQ A;  3GAS A;  3K87 A;  3VY2 A;  1T9M A;  1W3O A;  4HMS A;  1TY9 A;  3HMZ A;  3DNH A;  3K86 A;  2GUJ A;  4ZKY A;  3ZOH A;  5BNC A;  2IML A;  4TV4 A;  2RE7 A;  2A2J A;  3KYF A;  3TGV A;  2X1K A;  3A20 A;  1W3P A;  4HMV A;  1FLM A;  5ESC A;  1I0S A;  3AMF A;  3U5W A;  2HTD A;  2OU5 A;  2VPA A;  3AWH A;  3KYG A;  2I02 A;  5CHE C;  4HX6 A;  3ZOG A;  2Q9K A;  4XHY A;  2X1J A;  4Z85 A;  1RZ0 A;  3R5W A;  3E4V A;  3R5R A;  3ZOE A;  4W64 A;  2L1T A;  2R6V A; 
#chains in the Genus database with same CATH homology
 2RDE A;  4XJ2 A;  4HMU A;  3B5M A;  5JAB A;  1VL7 A;  2D37 A;  2ARZ A;  2D36 A;  2ECU A;  3BPK A;  2HTI A;  3PFT A;  1XHN A;  1EJE A;  3IN6 A;  3R5Y A;  3U0I A;  3BA3 A;  4YBN A;  1G79 A;  1Y30 A;  3FKH A;  4HMT A;  2AQ6 A;  1RFE A;  2IG6 A;  1I0R A;  2HHZ A;  1USC A;  1G76 A;  1WLI A;  3EC6 A;  3F7E A;  1W3R A;  1W3Q A;  4N7R C;  1G78 A;  1G77 A;  2QEA A;  3CB0 A;  1CI0 A;  3ZOF A;  2QCK A;  2D38 A;  3K88 A;  2NR4 A;  3A6R A;  1WLK A;  2FUR A;  2HQ9 A;  3ZOD A;  2ASF A;  3SWJ A;  2FG9 A;  1WGB A;  4Y9I A;  1DNL A;  3HY8 A;  1USF A;  3U34 A;  3DMB A;  3H96 A;  2IAB A;  3R5L A;  4IRA A;  1YLN A;  4R82 A;  4F07 A;  3FGE A;  2ED4 A;  4L82 A;  3NFW A;  2D5M A;  3RH7 A;  2I51 A;  2ECR A;  3R5Z A;  1JNW A;  2GJG A;  4QVB A;  3VY5 A;  1W9A A;  3DB0 A;  3R5P A;  3A6Q A;  3U35 A;  2HQ7 A;  1YOA A;  2PTF A;  4HMW A;  2OL5 A;  2E83 A;  1AXJ A;  1XXO A;  2R0X A;  4HMX A;  1NRG A;  5CHO A;  3ZOC A;  1WV4 A;  3VYA A;  4YWN A;  3BNK A;  1RZ1 A;  3CP3 A;  2FHQ A;  3GAS A;  3K87 A;  3VY2 A;  1T9M A;  1W3O A;  4HMS A;  1TY9 A;  3HMZ A;  3DNH A;  3K86 A;  4ZKY A;  3ZOH A;  5BNC A;  2IML A;  2RE7 A;  2A2J A;  3KYF A;  3TGV A;  2X1K A;  3A20 A;  1W3P A;  4HMV A;  1FLM A;  5ESC A;  1I0S A;  3AMF A;  3U5W A;  2HTD A;  2OU5 A;  2VPA A;  3AWH A;  3KYG A;  2I02 A;  5CHE C;  4HX6 A;  3ZOG A;  2Q9K A;  4XHY A;  2X1J A;  4Z85 A;  1RZ0 A;  3R5W A;  3E4V A;  3R5R A;  3ZOE A;  2R6V A; 
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similar chains in the Genus database (?% sequence similarity)
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