1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
1JNWA 2AQ6A 4HMUA 4F07A 2FG9A 1G76A 1W3RA 1XXOA 3A6RA 1VL7A 2FURA 5CHOA 1CI0A 3GASA 1G78A 3U34A 2HQ7A 1TY9A 2HTIA 3BPKA 2D5MA 3E4VA 3ZOEA 4QVBA 2GJGA 2A2JA 2HTDA 2IG6A 3KYFA 2NR4A 1EJEA 1FLMA 2ASFA 3CB0A 4HMVA 1DNLA 4Y9IA 4YWNA 4IRAA 2OL5A 3A20A 4XHYA 2PTFA 1G77A 2IABA 2I02A 3U5WA 3R5YA 3TGVA 3K88A 1RZ1A 3R5ZA 1AXJA 2QEAA 1USFA 4ZKYA 2ECRA 3VY5A 2X1KA 4HX6A 3H96A 4Z85A 1I0SA 3ZOCA 2FHQA 4R82A 1XHNA 2X1JA 2E83A 3EC6A 3K87A 2ECUA 3BA3A 3KYGA 2D37A 2Q9KA 2HQ9A 3AWHA 3DMBA 3FKHA 4N7RC 3SWJA 2ARZA 3U0IA 1I0RA 3CP3A 1WLKA 5JABA 1W3PA 2I51A 2IMLA 3HMZA 2VPAA 3R5WA 3NFWA 3R5LA 2D38A 1W3OA 2R6VA 4HMSA 4YBNA 3VY2A 1RFEA 3RH7A 1G79A 1W3QA 2OU5A 3R5RA 4XJ2A 3A6QA 1YOAA 4HMWA 1WV4A 3U35A 3DB0A 3ZOHA 1W9AA 1RZ0A 1WLIA 3BNKA 5CHEC 3ZOGA 2ED4A 2RE7A 3DNHA 3B5MA 3ZODA 2D36A 2HHZA 4L82A 2QCKA 3ZOFA 1YLNA 5BNCA 1NRGA 3K86A 3IN6A 5ESCA 3AMFA 1WGBA 3FGEA 2R0XA 4HMTA 4HMXA 2RDEA 3VYAA 1USCA 3F7EA 1T9MA 3HY8A 1Y30A 3PFTA 3R5PA
chains in the Genus database with same CATH superfamily
2GUJA 1JNWA 2AQ6A 4HMUA 4F07A 2FG9A 1G76A 1W3RA 1XXOA 3A6RA 1VL7A 2FURA 5CHOA 1CI0A 3GASA 1G78A 3U34A 2HQ7A 1TY9A 2HTIA 3BPKA 2D5MA 3E4VA 3ZOEA 4QVBA 2GJGA 2A2JA 2HTDA 2IG6A 3EAAA 3KYFA 2NR4A 1EJEA 1FLMA 2ASFA 2K4QA 3CB0A 4HMVA 1DNLA 4Y9IA 4YWNA 3V4HA 4IRAA 2OL5A 3A20A 4XHYA 2PTFA 1G77A 2IABA 2I02A 3U5WA 3R5YA 3TGVA 3K88A 1RZ1A 3R5ZA 1AXJA 2QEAA 1USFA 4ZKYA 2ECRA 3VY5A 2X1KA 4HKHA 4HX6A 4W64A 2L1TA 3H96A 4Z85A 1I0SA 3ZOCA 2FHQA 4R82A 1XHNA 2X1JA 2E83A 3EC6A 3K87A 2ECUA 3BA3A 3KYGA 2D37A 2Q9KA 2HQ9A 3AWHA 3DMBA 3FKHA 4N7RC 3SWJA 2ARZA 3U0IA 1Y12A 1I0RA 3CP3A 1WLKA 5JABA 1W3PA 2I51A 2IMLA 3HMZA 2P5ZX 2VPAA 3R5WA 3NFWA 3R5LA 2D38A 1W3OA 2R6VA 4HMSA 4YBNA 4MTKA 3VY2A 1RFEA 3RH7A 3HE1A 1G79A 1W3QA 2OU5A 3R5RA 4XJ2A 3A6QA 1YOAA 4HMWA 1WV4A 3U35A 4TV4A 3DB0A 3ZOHA 1W9AA 1RZ0A 1WLIA 3BNKA 5CHEC 3ZOGA 2ED4A 2RE7A 3DNHA 3B5MA 3ZODA 2D36A 2HHZA 4L82A 2QCKA 3ZOFA 1YLNA 5BNCA 1NRGA 3K86A 3IN6A 5ESCA 3AMFA 1WGBA 3FGEA 2R0XA 4HMTA 4HMXA 2RDEA 3VYAA 1USCA 3F7EA 1T9MA 4UHVA 3HY8A 1Y30A 3PFTA 3R5PA
chains in the Genus database with same CATH topology
1JNWA 2AQ6A 4HMUA 4F07A 2FG9A 1G76A 1W3RA 1XXOA 3A6RA 1VL7A 2FURA 5CHOA 1CI0A 3GASA 1G78A 3U34A 2HQ7A 1TY9A 2HTIA 3BPKA 2D5MA 3E4VA 3ZOEA 4QVBA 2GJGA 2A2JA 2HTDA 2IG6A 3KYFA 2NR4A 1EJEA 1FLMA 2ASFA 3CB0A 4HMVA 1DNLA 4Y9IA 4YWNA 4IRAA 2OL5A 3A20A 4XHYA 2PTFA 1G77A 2IABA 2I02A 3U5WA 3R5YA 3TGVA 3K88A 1RZ1A 3R5ZA 1AXJA 2QEAA 1USFA 4ZKYA 2ECRA 3VY5A 2X1KA 4HX6A 3H96A 4Z85A 1I0SA 3ZOCA 2FHQA 4R82A 1XHNA 2X1JA 2E83A 3EC6A 3K87A 2ECUA 3BA3A 3KYGA 2D37A 2Q9KA 2HQ9A 3AWHA 3DMBA 3FKHA 4N7RC 3SWJA 2ARZA 3U0IA 1I0RA 3CP3A 1WLKA 5JABA 1W3PA 2I51A 2IMLA 3HMZA 2VPAA 3R5WA 3NFWA 3R5LA 2D38A 1W3OA 2R6VA 4HMSA 4YBNA 3VY2A 1RFEA 3RH7A 1G79A 1W3QA 2OU5A 3R5RA 4XJ2A 3A6QA 1YOAA 4HMWA 1WV4A 3U35A 3DB0A 3ZOHA 1W9AA 1RZ0A 1WLIA 3BNKA 5CHEC 3ZOGA 2ED4A 2RE7A 3DNHA 3B5MA 3ZODA 2D36A 2HHZA 4L82A 2QCKA 3ZOFA 1YLNA 5BNCA 1NRGA 3K86A 3IN6A 5ESCA 3AMFA 1WGBA 3FGEA 2R0XA 4HMTA 4HMXA 2RDEA 3VYAA 1USCA 3F7EA 1T9MA 3HY8A 1Y30A 3PFTA 3R5PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1JNW A;  2AQ6 A;  4HMU A;  4F07 A;  2FG9 A;  1G76 A;  1W3R A;  1XXO A;  3A6R A;  1VL7 A;  2FUR A;  5CHO A;  1CI0 A;  3GAS A;  1G78 A;  3U34 A;  2HQ7 A;  1TY9 A;  2HTI A;  3BPK A;  2D5M A;  3E4V A;  3ZOE A;  4QVB A;  2GJG A;  2A2J A;  2HTD A;  2IG6 A;  3KYF A;  2NR4 A;  1EJE A;  1FLM A;  2ASF A;  3CB0 A;  4HMV A;  1DNL A;  4Y9I A;  4YWN A;  4IRA A;  2OL5 A;  3A20 A;  4XHY A;  2PTF A;  1G77 A;  2IAB A;  2I02 A;  3U5W A;  3R5Y A;  3TGV A;  3K88 A;  1RZ1 A;  3R5Z A;  1AXJ A;  2QEA A;  1USF A;  4ZKY A;  2ECR A;  3VY5 A;  2X1K A;  4HX6 A;  3H96 A;  4Z85 A;  1I0S A;  3ZOC A;  2FHQ A;  4R82 A;  1XHN A;  2X1J A;  2E83 A;  3EC6 A;  3K87 A;  2ECU A;  3BA3 A;  3KYG A;  2D37 A;  2Q9K A;  2HQ9 A;  3AWH A;  3DMB A;  3FKH A;  4N7R C;  3SWJ A;  2ARZ A;  3U0I A;  1I0R A;  3CP3 A;  1WLK A;  5JAB A;  1W3P A;  2I51 A;  2IML A;  3HMZ A;  2VPA A;  3R5W A;  3NFW A;  3R5L A;  2D38 A;  1W3O A;  2R6V A;  4HMS A;  4YBN A;  3VY2 A;  1RFE A;  3RH7 A;  1G79 A;  1W3Q A;  2OU5 A;  3R5R A;  4XJ2 A;  3A6Q A;  1YOA A;  4HMW A;  1WV4 A;  3U35 A;  3DB0 A;  3ZOH A;  1W9A A;  1RZ0 A;  1WLI A;  3BNK A;  5CHE C;  3ZOG A;  2ED4 A;  2RE7 A;  3DNH A;  3B5M A;  3ZOD A;  2D36 A;  2HHZ A;  4L82 A;  2QCK A;  3ZOF A;  1YLN A;  5BNC A;  1NRG A;  3K86 A;  3IN6 A;  5ESC A;  3AMF A;  1WGB A;  3FGE A;  2R0X A;  4HMT A;  4HMX A;  2RDE A;  3VYA A;  1USC A;  3F7E A;  1T9M A;  3HY8 A;  1Y30 A;  3PFT A;  3R5P A; 
#chains in the Genus database with same CATH topology
 2GUJ A;  1JNW A;  2AQ6 A;  4HMU A;  4F07 A;  2FG9 A;  1G76 A;  1W3R A;  1XXO A;  3A6R A;  1VL7 A;  2FUR A;  5CHO A;  1CI0 A;  3GAS A;  1G78 A;  3U34 A;  2HQ7 A;  1TY9 A;  2HTI A;  3BPK A;  2D5M A;  3E4V A;  3ZOE A;  4QVB A;  2GJG A;  2A2J A;  2HTD A;  2IG6 A;  3EAA A;  3KYF A;  2NR4 A;  1EJE A;  1FLM A;  2ASF A;  2K4Q A;  3CB0 A;  4HMV A;  1DNL A;  4Y9I A;  4YWN A;  3V4H A;  4IRA A;  2OL5 A;  3A20 A;  4XHY A;  2PTF A;  1G77 A;  2IAB A;  2I02 A;  3U5W A;  3R5Y A;  3TGV A;  3K88 A;  1RZ1 A;  3R5Z A;  1AXJ A;  2QEA A;  1USF A;  4ZKY A;  2ECR A;  3VY5 A;  2X1K A;  4HKH A;  4HX6 A;  4W64 A;  2L1T A;  3H96 A;  4Z85 A;  1I0S A;  3ZOC A;  2FHQ A;  4R82 A;  1XHN A;  2X1J A;  2E83 A;  3EC6 A;  3K87 A;  2ECU A;  3BA3 A;  3KYG A;  2D37 A;  2Q9K A;  2HQ9 A;  3AWH A;  3DMB A;  3FKH A;  4N7R C;  3SWJ A;  2ARZ A;  3U0I A;  1Y12 A;  1I0R A;  3CP3 A;  1WLK A;  5JAB A;  1W3P A;  2I51 A;  2IML A;  3HMZ A;  2P5Z X;  2VPA A;  3R5W A;  3NFW A;  3R5L A;  2D38 A;  1W3O A;  2R6V A;  4HMS A;  4YBN A;  4MTK A;  3VY2 A;  1RFE A;  3RH7 A;  3HE1 A;  1G79 A;  1W3Q A;  2OU5 A;  3R5R A;  4XJ2 A;  3A6Q A;  1YOA A;  4HMW A;  1WV4 A;  3U35 A;  4TV4 A;  3DB0 A;  3ZOH A;  1W9A A;  1RZ0 A;  1WLI A;  3BNK A;  5CHE C;  3ZOG A;  2ED4 A;  2RE7 A;  3DNH A;  3B5M A;  3ZOD A;  2D36 A;  2HHZ A;  4L82 A;  2QCK A;  3ZOF A;  1YLN A;  5BNC A;  1NRG A;  3K86 A;  3IN6 A;  5ESC A;  3AMF A;  1WGB A;  3FGE A;  2R0X A;  4HMT A;  4HMX A;  2RDE A;  3VYA A;  1USC A;  3F7E A;  1T9M A;  4UHV A;  3HY8 A;  1Y30 A;  3PFT A;  3R5P A; 
#chains in the Genus database with same CATH homology
 1JNW A;  2AQ6 A;  4HMU A;  4F07 A;  2FG9 A;  1G76 A;  1W3R A;  1XXO A;  3A6R A;  1VL7 A;  2FUR A;  5CHO A;  1CI0 A;  3GAS A;  1G78 A;  3U34 A;  2HQ7 A;  1TY9 A;  2HTI A;  3BPK A;  2D5M A;  3E4V A;  3ZOE A;  4QVB A;  2GJG A;  2A2J A;  2HTD A;  2IG6 A;  3KYF A;  2NR4 A;  1EJE A;  1FLM A;  2ASF A;  3CB0 A;  4HMV A;  1DNL A;  4Y9I A;  4YWN A;  4IRA A;  2OL5 A;  3A20 A;  4XHY A;  2PTF A;  1G77 A;  2IAB A;  2I02 A;  3U5W A;  3R5Y A;  3TGV A;  3K88 A;  1RZ1 A;  3R5Z A;  1AXJ A;  2QEA A;  1USF A;  4ZKY A;  2ECR A;  3VY5 A;  2X1K A;  4HX6 A;  3H96 A;  4Z85 A;  1I0S A;  3ZOC A;  2FHQ A;  4R82 A;  1XHN A;  2X1J A;  2E83 A;  3EC6 A;  3K87 A;  2ECU A;  3BA3 A;  3KYG A;  2D37 A;  2Q9K A;  2HQ9 A;  3AWH A;  3DMB A;  3FKH A;  4N7R C;  3SWJ A;  2ARZ A;  3U0I A;  1I0R A;  3CP3 A;  1WLK A;  5JAB A;  1W3P A;  2I51 A;  2IML A;  3HMZ A;  2VPA A;  3R5W A;  3NFW A;  3R5L A;  2D38 A;  1W3O A;  2R6V A;  4HMS A;  4YBN A;  3VY2 A;  1RFE A;  3RH7 A;  1G79 A;  1W3Q A;  2OU5 A;  3R5R A;  4XJ2 A;  3A6Q A;  1YOA A;  4HMW A;  1WV4 A;  3U35 A;  3DB0 A;  3ZOH A;  1W9A A;  1RZ0 A;  1WLI A;  3BNK A;  5CHE C;  3ZOG A;  2ED4 A;  2RE7 A;  3DNH A;  3B5M A;  3ZOD A;  2D36 A;  2HHZ A;  4L82 A;  2QCK A;  3ZOF A;  1YLN A;  5BNC A;  1NRG A;  3K86 A;  3IN6 A;  5ESC A;  3AMF A;  1WGB A;  3FGE A;  2R0X A;  4HMT A;  4HMX A;  2RDE A;  3VYA A;  1USC A;  3F7E A;  1T9M A;  3HY8 A;  1Y30 A;  3PFT A;  3R5P A; 
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similar chains in the Genus database (?% sequence similarity)
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