1I0RA

Crystal structure of ferric reductase from archaeoglobus fulgidus
Total Genus 41
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
161
structure length
161
Chain Sequence
MDVEAFYKISYGLYIVTSESNGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELETPMEFIGRFGFRKSSEFEKFDGVEYKTGKTGVPLVTQHAVAVIEAKVVKECDVGTHTLFVGEAVDAEVLKDAEVLTYADYHLMKKGKTPRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-20)S7 (103-105)TIV1 (19-22)AH1 (51-59)S2 (23-29)TI3 (83-86)TI5 (88-91)TI1 (47-50)TIV2 (29-32)S3 (32-36)S4 (41-47)TIV3 (36-39)S9 (126-138)TIV4 (37-40)S8 (109-122)EMPTYS5 (61-67)TI2 (68-71)TII2 (106-109)TI4 (84-87)TII1 (90-93)S6 (95-97)TI6 (98-101)TII'1 (123-126)3H1 (3-8)AH2 (73-81)AH3 (147-155)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Archaeoglobus fulgidus
publication title Crystal structures of a novel ferric reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus and its complex with NADP+.
pubmed doi rcsb
molecule keywords CONSERVED HYPOTHETICAL PROTEIN
total genus 41
structure length 161
sequence length 161
chains with identical sequence B
ec nomenclature ec 1.16.1.10: Ferric-chelate reductase (NAD(P)H).
pdb deposition date 2001-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1i0rA00
2R0XA 1TY9A 1USFA 3F7EA 2HQ7A 3DMBA 3KYGA 1AXJA 2ED4A 3GASA 1W3PA 4YBNA 4Z85A 1G78A 4N7RC 3ZOEA 3VYAA 2E83A 1XHNA 3VY2A 1FLMA 4QVBA 1W3RA 1Y30A 1YLNA 4Y9IA 3U0IA 3EC6A 2VPAA 3H96A 1DNLA 2D5MA 4XJ2A 3DB0A 2IABA 4F07A 2X1JA 4HMUA 2ECRA 1WV4A 3A6RA 3AMFA 3HMZA 3ZODA 1W9AA 1WLIA 3NFWA 1EJEA 2R6VA 3U34A 4XHYA 3BA3A 3R5PA 2HTIA 2QCKA 3A6QA 3K88A 4L82A 5JABA 2OU5A 2Q9KA 3FKHA 1G77A 3KYFA 4R82A 3ZOHA 2I02A 2ASFA 3R5ZA 2RDEA 1JNWA 2ARZA 1T9MA 3K87A 4YWNA 1RZ0A 3HY8A 3VY5A 4ZKYA 2D37A 2OL5A 4HMSA 2IG6A 5ESCA 4HMXA 2HQ9A 2FHQA 2I51A 5CHEC 1I0SA 3R5LA 3PFTA 2RE7A 5CHOA 3K86A 2IMLA 3BPKA 1G79A 1W3OA 3R5WA 1RFEA 3A20A 4HMVA 3CB0A 3U35A 2NR4A 1USCA 4HMTA 3ZOFA 1RZ1A 1W3QA 2FG9A 3SWJA 5BNCA 3RH7A 2HTDA 2A2JA 2X1KA 2D36A 1VL7A 3ZOCA 4IRAA 1WGBA 1WLKA 2HHZA 3DNHA 3BNKA 3B5MA 3CP3A 1G76A 2AQ6A 3AWHA 3FGEA 3IN6A 1NRGA 2GJGA 1YOAA 1I0RA 3R5YA 3ZOGA 2PTFA 3TGVA 2ECUA 2D38A 2FURA 4HX6A 4HMWA 1CI0A 3E4VA 1XXOA 2QEAA 3U5WA 3R5RA
chains in the Genus database with same CATH superfamily
2R0XA 1TY9A 1USFA 3F7EA 2HQ7A 3DMBA 3KYGA 1AXJA 2ED4A 3GASA 1W3PA 4MTKA 4HKHA 4YBNA 4Z85A 1G78A 4N7RC 3ZOEA 3VYAA 2E83A 3V4HA 1XHNA 3VY2A 1FLMA 4QVBA 1W3RA 1Y30A 3HE1A 1YLNA 4Y9IA 3U0IA 3EC6A 2VPAA 3H96A 1DNLA 2D5MA 4XJ2A 3DB0A 2IABA 4F07A 2X1JA 4HMUA 2ECRA 3EAAA 1WV4A 3A6RA 3AMFA 3HMZA 3ZODA 1W9AA 1WLIA 3NFWA 1EJEA 2R6VA 2P5ZX 3U34A 4XHYA 3BA3A 3R5PA 2HTIA 4UHVA 2QCKA 3A6QA 3K88A 4L82A 5JABA 2OU5A 2Q9KA 3FKHA 1G77A 3KYFA 4R82A 3ZOHA 2I02A 2ASFA 3R5ZA 2RDEA 1JNWA 2ARZA 1T9MA 4TV4A 3K87A 4YWNA 1RZ0A 3HY8A 3VY5A 4ZKYA 2D37A 2OL5A 4HMSA 2IG6A 5ESCA 4HMXA 2HQ9A 2FHQA 2I51A 5CHEC 1Y12A 1I0SA 3R5LA 3PFTA 2RE7A 5CHOA 3K86A 2IMLA 3BPKA 1G79A 1W3OA 3R5WA 1RFEA 3A20A 4HMVA 3CB0A 3U35A 2NR4A 1USCA 4HMTA 3ZOFA 1RZ1A 2K4QA 1W3QA 2FG9A 3SWJA 5BNCA 2GUJA 3RH7A 2HTDA 2A2JA 2D36A 2X1KA 1VL7A 3ZOCA 4IRAA 1WGBA 4W64A 1WLKA 2HHZA 3DNHA 3BNKA 3B5MA 3CP3A 1G76A 2AQ6A 3AWHA 3FGEA 3IN6A 1NRGA 2GJGA 1YOAA 1I0RA 3R5YA 3ZOGA 2PTFA 3TGVA 2ECUA 2L1TA 2D38A 2FURA 4HX6A 4HMWA 1CI0A 3E4VA 1XXOA 2QEAA 3U5WA 3R5RA
chains in the Genus database with same CATH topology
2R0XA 1TY9A 1USFA 3F7EA 2HQ7A 3DMBA 3KYGA 1AXJA 2ED4A 3GASA 1W3PA 4YBNA 4Z85A 1G78A 4N7RC 3ZOEA 3VYAA 2E83A 1XHNA 3VY2A 1FLMA 4QVBA 1W3RA 1Y30A 1YLNA 4Y9IA 3U0IA 3EC6A 2VPAA 3H96A 1DNLA 2D5MA 4XJ2A 3DB0A 2IABA 4F07A 2X1JA 4HMUA 2ECRA 1WV4A 3A6RA 3AMFA 3HMZA 3ZODA 1W9AA 1WLIA 3NFWA 1EJEA 2R6VA 3U34A 4XHYA 3BA3A 3R5PA 2HTIA 2QCKA 3A6QA 3K88A 4L82A 5JABA 2OU5A 2Q9KA 3FKHA 1G77A 3KYFA 4R82A 3ZOHA 2I02A 2ASFA 3R5ZA 2RDEA 1JNWA 2ARZA 1T9MA 3K87A 4YWNA 1RZ0A 3HY8A 3VY5A 4ZKYA 2D37A 2OL5A 4HMSA 2IG6A 5ESCA 4HMXA 2HQ9A 2FHQA 2I51A 5CHEC 1I0SA 3R5LA 3PFTA 2RE7A 5CHOA 3K86A 2IMLA 3BPKA 1G79A 1W3OA 3R5WA 1RFEA 3A20A 4HMVA 3CB0A 3U35A 2NR4A 1USCA 4HMTA 3ZOFA 1RZ1A 1W3QA 2FG9A 3SWJA 5BNCA 3RH7A 2HTDA 2A2JA 2X1KA 2D36A 1VL7A 3ZOCA 4IRAA 1WGBA 1WLKA 2HHZA 3DNHA 3BNKA 3B5MA 3CP3A 1G76A 2AQ6A 3AWHA 3FGEA 3IN6A 1NRGA 2GJGA 1YOAA 1I0RA 3R5YA 3ZOGA 2PTFA 3TGVA 2ECUA 2D38A 2FURA 4HX6A 4HMWA 1CI0A 3E4VA 1XXOA 2QEAA 3U5WA 3R5RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2R0X A;  1TY9 A;  1USF A;  3F7E A;  2HQ7 A;  3DMB A;  3KYG A;  1AXJ A;  2ED4 A;  3GAS A;  1W3P A;  4YBN A;  4Z85 A;  1G78 A;  4N7R C;  3ZOE A;  3VYA A;  2E83 A;  1XHN A;  3VY2 A;  1FLM A;  4QVB A;  1W3R A;  1Y30 A;  1YLN A;  4Y9I A;  3U0I A;  3EC6 A;  2VPA A;  3H96 A;  1DNL A;  2D5M A;  4XJ2 A;  3DB0 A;  2IAB A;  4F07 A;  2X1J A;  4HMU A;  2ECR A;  1WV4 A;  3A6R A;  3AMF A;  3HMZ A;  3ZOD A;  1W9A A;  1WLI A;  3NFW A;  1EJE A;  2R6V A;  3U34 A;  4XHY A;  3BA3 A;  3R5P A;  2HTI A;  2QCK A;  3A6Q A;  3K88 A;  4L82 A;  5JAB A;  2OU5 A;  2Q9K A;  3FKH A;  1G77 A;  3KYF A;  4R82 A;  3ZOH A;  2I02 A;  2ASF A;  3R5Z A;  2RDE A;  1JNW A;  2ARZ A;  1T9M A;  3K87 A;  4YWN A;  1RZ0 A;  3HY8 A;  3VY5 A;  4ZKY A;  2D37 A;  2OL5 A;  4HMS A;  2IG6 A;  5ESC A;  4HMX A;  2HQ9 A;  2FHQ A;  2I51 A;  5CHE C;  1I0S A;  3R5L A;  3PFT A;  2RE7 A;  5CHO A;  3K86 A;  2IML A;  3BPK A;  1G79 A;  1W3O A;  3R5W A;  1RFE A;  3A20 A;  4HMV A;  3CB0 A;  3U35 A;  2NR4 A;  1USC A;  4HMT A;  3ZOF A;  1RZ1 A;  1W3Q A;  2FG9 A;  3SWJ A;  5BNC A;  3RH7 A;  2HTD A;  2A2J A;  2X1K A;  2D36 A;  1VL7 A;  3ZOC A;  4IRA A;  1WGB A;  1WLK A;  2HHZ A;  3DNH A;  3BNK A;  3B5M A;  3CP3 A;  1G76 A;  2AQ6 A;  3AWH A;  3FGE A;  3IN6 A;  1NRG A;  2GJG A;  1YOA A;  1I0R A;  3R5Y A;  3ZOG A;  2PTF A;  3TGV A;  2ECU A;  2D38 A;  2FUR A;  4HX6 A;  4HMW A;  1CI0 A;  3E4V A;  1XXO A;  2QEA A;  3U5W A;  3R5R A; 
#chains in the Genus database with same CATH topology
 2R0X A;  1TY9 A;  1USF A;  3F7E A;  2HQ7 A;  3DMB A;  3KYG A;  1AXJ A;  2ED4 A;  3GAS A;  1W3P A;  4MTK A;  4HKH A;  4YBN A;  4Z85 A;  1G78 A;  4N7R C;  3ZOE A;  3VYA A;  2E83 A;  3V4H A;  1XHN A;  3VY2 A;  1FLM A;  4QVB A;  1W3R A;  1Y30 A;  3HE1 A;  1YLN A;  4Y9I A;  3U0I A;  3EC6 A;  2VPA A;  3H96 A;  1DNL A;  2D5M A;  4XJ2 A;  3DB0 A;  2IAB A;  4F07 A;  2X1J A;  4HMU A;  2ECR A;  3EAA A;  1WV4 A;  3A6R A;  3AMF A;  3HMZ A;  3ZOD A;  1W9A A;  1WLI A;  3NFW A;  1EJE A;  2R6V A;  2P5Z X;  3U34 A;  4XHY A;  3BA3 A;  3R5P A;  2HTI A;  4UHV A;  2QCK A;  3A6Q A;  3K88 A;  4L82 A;  5JAB A;  2OU5 A;  2Q9K A;  3FKH A;  1G77 A;  3KYF A;  4R82 A;  3ZOH A;  2I02 A;  2ASF A;  3R5Z A;  2RDE A;  1JNW A;  2ARZ A;  1T9M A;  4TV4 A;  3K87 A;  4YWN A;  1RZ0 A;  3HY8 A;  3VY5 A;  4ZKY A;  2D37 A;  2OL5 A;  4HMS A;  2IG6 A;  5ESC A;  4HMX A;  2HQ9 A;  2FHQ A;  2I51 A;  5CHE C;  1Y12 A;  1I0S A;  3R5L A;  3PFT A;  2RE7 A;  5CHO A;  3K86 A;  2IML A;  3BPK A;  1G79 A;  1W3O A;  3R5W A;  1RFE A;  3A20 A;  4HMV A;  3CB0 A;  3U35 A;  2NR4 A;  1USC A;  4HMT A;  3ZOF A;  1RZ1 A;  2K4Q A;  1W3Q A;  2FG9 A;  3SWJ A;  5BNC A;  2GUJ A;  3RH7 A;  2HTD A;  2A2J A;  2D36 A;  2X1K A;  1VL7 A;  3ZOC A;  4IRA A;  1WGB A;  4W64 A;  1WLK A;  2HHZ A;  3DNH A;  3BNK A;  3B5M A;  3CP3 A;  1G76 A;  2AQ6 A;  3AWH A;  3FGE A;  3IN6 A;  1NRG A;  2GJG A;  1YOA A;  1I0R A;  3R5Y A;  3ZOG A;  2PTF A;  3TGV A;  2ECU A;  2L1T A;  2D38 A;  2FUR A;  4HX6 A;  4HMW A;  1CI0 A;  3E4V A;  1XXO A;  2QEA A;  3U5W A;  3R5R A; 
#chains in the Genus database with same CATH homology
 2R0X A;  1TY9 A;  1USF A;  3F7E A;  2HQ7 A;  3DMB A;  3KYG A;  1AXJ A;  2ED4 A;  3GAS A;  1W3P A;  4YBN A;  4Z85 A;  1G78 A;  4N7R C;  3ZOE A;  3VYA A;  2E83 A;  1XHN A;  3VY2 A;  1FLM A;  4QVB A;  1W3R A;  1Y30 A;  1YLN A;  4Y9I A;  3U0I A;  3EC6 A;  2VPA A;  3H96 A;  1DNL A;  2D5M A;  4XJ2 A;  3DB0 A;  2IAB A;  4F07 A;  2X1J A;  4HMU A;  2ECR A;  1WV4 A;  3A6R A;  3AMF A;  3HMZ A;  3ZOD A;  1W9A A;  1WLI A;  3NFW A;  1EJE A;  2R6V A;  3U34 A;  4XHY A;  3BA3 A;  3R5P A;  2HTI A;  2QCK A;  3A6Q A;  3K88 A;  4L82 A;  5JAB A;  2OU5 A;  2Q9K A;  3FKH A;  1G77 A;  3KYF A;  4R82 A;  3ZOH A;  2I02 A;  2ASF A;  3R5Z A;  2RDE A;  1JNW A;  2ARZ A;  1T9M A;  3K87 A;  4YWN A;  1RZ0 A;  3HY8 A;  3VY5 A;  4ZKY A;  2D37 A;  2OL5 A;  4HMS A;  2IG6 A;  5ESC A;  4HMX A;  2HQ9 A;  2FHQ A;  2I51 A;  5CHE C;  1I0S A;  3R5L A;  3PFT A;  2RE7 A;  5CHO A;  3K86 A;  2IML A;  3BPK A;  1G79 A;  1W3O A;  3R5W A;  1RFE A;  3A20 A;  4HMV A;  3CB0 A;  3U35 A;  2NR4 A;  1USC A;  4HMT A;  3ZOF A;  1RZ1 A;  1W3Q A;  2FG9 A;  3SWJ A;  5BNC A;  3RH7 A;  2HTD A;  2A2J A;  2X1K A;  2D36 A;  1VL7 A;  3ZOC A;  4IRA A;  1WGB A;  1WLK A;  2HHZ A;  3DNH A;  3BNK A;  3B5M A;  3CP3 A;  1G76 A;  2AQ6 A;  3AWH A;  3FGE A;  3IN6 A;  1NRG A;  2GJG A;  1YOA A;  1I0R A;  3R5Y A;  3ZOG A;  2PTF A;  3TGV A;  2ECU A;  2D38 A;  2FUR A;  4HX6 A;  4HMW A;  1CI0 A;  3E4V A;  1XXO A;  2QEA A;  3U5W A;  3R5R A; 
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similar chains in the Genus database (?% sequence similarity)
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