1USCA

Putative styrene monooxygenase small component
Total Genus 36
2040608010012014016005101520253035
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
36
sequence length
178
structure length
178
Chain Sequence
MRSYRAQGPLPGFYHYYPGVPAVVGVRVEERVNFCPAVWNTGLSADPPLFGVSISPKRFTHGLLLKARRFSASFHPFGQKDLVHWLGSHSGREVDKGQAPHFLGHTGVPILEGAYAAYELELLEVHTFGDHDLFVGRVVAVWEEEGLLDEKGRPKPGLALLYYGKGLYGRPAEETFAP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (14-17)TVIII1 (10-13)S10 (161-164)S3 (40-44)S1 (22-28)TIV1 (27-30)TI7 (104-107)S2 (31-37)TI3 (90-93)TI4 (91-94)S4 (49-54)TIV2 (37-40)TVIII2 (44-47)S9 (131-143)TIV3 (45-48)TI2 (55-58)AH1 (59-67)S8 (116-128)S5 (69-74)S7 (109-111)TIV4 (114-117)3H1 (77-79)TII3 (155-158)TII1 (111-114)AH2 (80-87)S11 (167-169)TI5 (95-98)TI6 (96-99)S6 (101-103)TII2 (144-147)TII'2 (128-131)TI8 (149-152)TI'1 (164-167)Updating...
connected with : NaN
publication title Crystal Structure of Putative Styrene Monooxygenase Small Component from Thermus Thermophilus
rcsb
molecule keywords PUTATIVE STYRENE MONOOXYGENASE SMALL COMPONENT
molecule tags Oxygenase
source organism Thermus thermophilus
total genus 36
structure length 178
sequence length 178
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-11-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 1uscA00
3A6RA 1G79A 4R82A 2E83A 2FHQA 3DMBA 4HMVA 1T9MA 3R5WA 3VY2A 1WLKA 3ZOFA 3VYAA 3FKHA 2HQ9A 1Y30A 1RFEA 2AQ6A 1JNWA 4HMXA 1G77A 2NR4A 2D37A 3R5LA 1NRGA 2OL5A 3AWHA 2HTDA 2I51A 2I02A 2R0XA 3R5PA 1WV4A 4N7RC 2PTFA 1W3QA 1G76A 3K87A 4HMSA 3AMFA 2HQ7A 2ASFA 2R6VA 3BNKA 4Y9IA 3F7EA 1W3OA 2ECRA 4IRAA 3BA3A 3KYGA 4QVBA 1USCA 2D36A 3DNHA 2QEAA 3ZOEA 3SWJA 3RH7A 1USFA 3BPKA 3PFTA 4HMUA 3U0IA 2ECUA 4F07A 3ZODA 5JABA 2QCKA 2Q9KA 2RE7A 2HTIA 2ED4A 2GJGA 1RZ0A 1FLMA 2A2JA 1YOAA 1RZ1A 1XXOA 3NFWA 1EJEA 3TGVA 3ZOGA 3U35A 1TY9A 2IMLA 1AXJA 1DNLA 1G78A 3U34A 2VPAA 2IABA 4XJ2A 5CHEC 1WLIA 3DB0A 1XHNA 3CP3A 3IN6A 2OU5A 4L82A 3KYFA 3ZOHA 2ARZA 4HX6A 3FGEA 3U5WA 1VL7A 2FG9A 2FURA 3R5YA 2X1JA 2IG6A 4HMWA 1W3RA 3A6QA 1CI0A 2X1KA 3R5RA 3HMZA 4YBNA 4XHYA 3E4VA 3HY8A 1I0RA 3EC6A 3K86A 2D38A 3B5MA 3A20A 3CB0A 1I0SA 5CHOA 3K88A 2D5MA 1W3PA 3H96A 3GASA 2RDEA 3R5ZA 5ESCA 3ZOCA 1YLNA 4ZKYA 3VY5A 1WGBA 4HMTA 1W9AA 4YWNA 2HHZA 5BNCA 4Z85A
chains in the Genus database with same CATH superfamily
3A6RA 1G79A 4R82A 1Y12A 2E83A 2FHQA 3DMBA 4HMVA 1T9MA 3R5WA 3VY2A 1WLKA 3ZOFA 3VYAA 3FKHA 2HQ9A 1Y30A 1RFEA 2AQ6A 1JNWA 4HMXA 3HE1A 1G77A 2NR4A 2D37A 4TV4A 3R5LA 1NRGA 2OL5A 3AWHA 2HTDA 2I51A 2I02A 2R0XA 3R5PA 1WV4A 4N7RC 2PTFA 1W3QA 1G76A 3K87A 4HMSA 3AMFA 2HQ7A 2ASFA 2R6VA 3BNKA 4Y9IA 3F7EA 1W3OA 3EAAA 2ECRA 4IRAA 4UHVA 3BA3A 3KYGA 4QVBA 1USCA 2D36A 3DNHA 3V4HA 2QEAA 3ZOEA 3SWJA 3RH7A 1USFA 2L1TA 3BPKA 3PFTA 4HMUA 4W64A 2ECUA 3U0IA 4F07A 3ZODA 5JABA 2QCKA 2Q9KA 2RE7A 2HTIA 2ED4A 2GJGA 1RZ0A 1FLMA 2A2JA 1YOAA 1RZ1A 1XXOA 3NFWA 1EJEA 3TGVA 3ZOGA 3U35A 1TY9A 2IMLA 1AXJA 1DNLA 1G78A 3U34A 2VPAA 2IABA 4XJ2A 2K4QA 5CHEC 1WLIA 3DB0A 1XHNA 3CP3A 3IN6A 2OU5A 4L82A 3KYFA 3ZOHA 2ARZA 4HX6A 3FGEA 3U5WA 1VL7A 2FG9A 2GUJA 2FURA 3R5YA 2IG6A 2X1JA 4HMWA 1W3RA 4HKHA 3A6QA 1CI0A 2X1KA 3R5RA 3HMZA 2P5ZX 4YBNA 4XHYA 4MTKA 3E4VA 3HY8A 1I0RA 3EC6A 3K86A 2D38A 3B5MA 3A20A 3CB0A 1I0SA 5CHOA 3K88A 2D5MA 1W3PA 3H96A 3GASA 2RDEA 3R5ZA 5ESCA 3ZOCA 1YLNA 4ZKYA 3VY5A 1WGBA 4HMTA 1W9AA 4YWNA 2HHZA 5BNCA 4Z85A
chains in the Genus database with same CATH topology
3A6RA 1G79A 4R82A 2E83A 2FHQA 3DMBA 4HMVA 1T9MA 3R5WA 3VY2A 1WLKA 3ZOFA 3VYAA 3FKHA 2HQ9A 1Y30A 1RFEA 2AQ6A 1JNWA 4HMXA 1G77A 2NR4A 2D37A 3R5LA 1NRGA 2OL5A 3AWHA 2HTDA 2I51A 2I02A 2R0XA 3R5PA 1WV4A 4N7RC 2PTFA 1W3QA 1G76A 3K87A 4HMSA 3AMFA 2HQ7A 2ASFA 2R6VA 3BNKA 4Y9IA 3F7EA 1W3OA 2ECRA 4IRAA 3BA3A 3KYGA 4QVBA 1USCA 2D36A 3DNHA 2QEAA 3ZOEA 3SWJA 3RH7A 1USFA 3BPKA 3PFTA 4HMUA 3U0IA 2ECUA 4F07A 3ZODA 5JABA 2QCKA 2Q9KA 2RE7A 2HTIA 2ED4A 2GJGA 1RZ0A 1FLMA 2A2JA 1YOAA 1RZ1A 1XXOA 3NFWA 1EJEA 3TGVA 3ZOGA 3U35A 1TY9A 2IMLA 1AXJA 1DNLA 1G78A 3U34A 2VPAA 2IABA 4XJ2A 5CHEC 1WLIA 3DB0A 1XHNA 3CP3A 3IN6A 2OU5A 4L82A 3KYFA 3ZOHA 2ARZA 4HX6A 3FGEA 3U5WA 1VL7A 2FG9A 2FURA 3R5YA 2X1JA 2IG6A 4HMWA 1W3RA 3A6QA 1CI0A 2X1KA 3R5RA 3HMZA 4YBNA 4XHYA 3E4VA 3HY8A 1I0RA 3EC6A 3K86A 2D38A 3B5MA 3A20A 3CB0A 1I0SA 5CHOA 3K88A 2D5MA 1W3PA 3H96A 3GASA 2RDEA 3R5ZA 5ESCA 3ZOCA 1YLNA 4ZKYA 3VY5A 1WGBA 4HMTA 1W9AA 4YWNA 2HHZA 5BNCA 4Z85A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3A6R A;  1G79 A;  4R82 A;  2E83 A;  2FHQ A;  3DMB A;  4HMV A;  1T9M A;  3R5W A;  3VY2 A;  1WLK A;  3ZOF A;  3VYA A;  3FKH A;  2HQ9 A;  1Y30 A;  1RFE A;  2AQ6 A;  1JNW A;  4HMX A;  1G77 A;  2NR4 A;  2D37 A;  3R5L A;  1NRG A;  2OL5 A;  3AWH A;  2HTD A;  2I51 A;  2I02 A;  2R0X A;  3R5P A;  1WV4 A;  4N7R C;  2PTF A;  1W3Q A;  1G76 A;  3K87 A;  4HMS A;  3AMF A;  2HQ7 A;  2ASF A;  2R6V A;  3BNK A;  4Y9I A;  3F7E A;  1W3O A;  2ECR A;  4IRA A;  3BA3 A;  3KYG A;  4QVB A;  1USC A;  2D36 A;  3DNH A;  2QEA A;  3ZOE A;  3SWJ A;  3RH7 A;  1USF A;  3BPK A;  3PFT A;  4HMU A;  3U0I A;  2ECU A;  4F07 A;  3ZOD A;  5JAB A;  2QCK A;  2Q9K A;  2RE7 A;  2HTI A;  2ED4 A;  2GJG A;  1RZ0 A;  1FLM A;  2A2J A;  1YOA A;  1RZ1 A;  1XXO A;  3NFW A;  1EJE A;  3TGV A;  3ZOG A;  3U35 A;  1TY9 A;  2IML A;  1AXJ A;  1DNL A;  1G78 A;  3U34 A;  2VPA A;  2IAB A;  4XJ2 A;  5CHE C;  1WLI A;  3DB0 A;  1XHN A;  3CP3 A;  3IN6 A;  2OU5 A;  4L82 A;  3KYF A;  3ZOH A;  2ARZ A;  4HX6 A;  3FGE A;  3U5W A;  1VL7 A;  2FG9 A;  2FUR A;  3R5Y A;  2X1J A;  2IG6 A;  4HMW A;  1W3R A;  3A6Q A;  1CI0 A;  2X1K A;  3R5R A;  3HMZ A;  4YBN A;  4XHY A;  3E4V A;  3HY8 A;  1I0R A;  3EC6 A;  3K86 A;  2D38 A;  3B5M A;  3A20 A;  3CB0 A;  1I0S A;  5CHO A;  3K88 A;  2D5M A;  1W3P A;  3H96 A;  3GAS A;  2RDE A;  3R5Z A;  5ESC A;  3ZOC A;  1YLN A;  4ZKY A;  3VY5 A;  1WGB A;  4HMT A;  1W9A A;  4YWN A;  2HHZ A;  5BNC A;  4Z85 A; 
#chains in the Genus database with same CATH topology
 3A6R A;  1G79 A;  4R82 A;  1Y12 A;  2E83 A;  2FHQ A;  3DMB A;  4HMV A;  1T9M A;  3R5W A;  3VY2 A;  1WLK A;  3ZOF A;  3VYA A;  3FKH A;  2HQ9 A;  1Y30 A;  1RFE A;  2AQ6 A;  1JNW A;  4HMX A;  3HE1 A;  1G77 A;  2NR4 A;  2D37 A;  4TV4 A;  3R5L A;  1NRG A;  2OL5 A;  3AWH A;  2HTD A;  2I51 A;  2I02 A;  2R0X A;  3R5P A;  1WV4 A;  4N7R C;  2PTF A;  1W3Q A;  1G76 A;  3K87 A;  4HMS A;  3AMF A;  2HQ7 A;  2ASF A;  2R6V A;  3BNK A;  4Y9I A;  3F7E A;  1W3O A;  3EAA A;  2ECR A;  4IRA A;  4UHV A;  3BA3 A;  3KYG A;  4QVB A;  1USC A;  2D36 A;  3DNH A;  3V4H A;  2QEA A;  3ZOE A;  3SWJ A;  3RH7 A;  1USF A;  2L1T A;  3BPK A;  3PFT A;  4HMU A;  4W64 A;  2ECU A;  3U0I A;  4F07 A;  3ZOD A;  5JAB A;  2QCK A;  2Q9K A;  2RE7 A;  2HTI A;  2ED4 A;  2GJG A;  1RZ0 A;  1FLM A;  2A2J A;  1YOA A;  1RZ1 A;  1XXO A;  3NFW A;  1EJE A;  3TGV A;  3ZOG A;  3U35 A;  1TY9 A;  2IML A;  1AXJ A;  1DNL A;  1G78 A;  3U34 A;  2VPA A;  2IAB A;  4XJ2 A;  2K4Q A;  5CHE C;  1WLI A;  3DB0 A;  1XHN A;  3CP3 A;  3IN6 A;  2OU5 A;  4L82 A;  3KYF A;  3ZOH A;  2ARZ A;  4HX6 A;  3FGE A;  3U5W A;  1VL7 A;  2FG9 A;  2GUJ A;  2FUR A;  3R5Y A;  2IG6 A;  2X1J A;  4HMW A;  1W3R A;  4HKH A;  3A6Q A;  1CI0 A;  2X1K A;  3R5R A;  3HMZ A;  2P5Z X;  4YBN A;  4XHY A;  4MTK A;  3E4V A;  3HY8 A;  1I0R A;  3EC6 A;  3K86 A;  2D38 A;  3B5M A;  3A20 A;  3CB0 A;  1I0S A;  5CHO A;  3K88 A;  2D5M A;  1W3P A;  3H96 A;  3GAS A;  2RDE A;  3R5Z A;  5ESC A;  3ZOC A;  1YLN A;  4ZKY A;  3VY5 A;  1WGB A;  4HMT A;  1W9A A;  4YWN A;  2HHZ A;  5BNC A;  4Z85 A; 
#chains in the Genus database with same CATH homology
 3A6R A;  1G79 A;  4R82 A;  2E83 A;  2FHQ A;  3DMB A;  4HMV A;  1T9M A;  3R5W A;  3VY2 A;  1WLK A;  3ZOF A;  3VYA A;  3FKH A;  2HQ9 A;  1Y30 A;  1RFE A;  2AQ6 A;  1JNW A;  4HMX A;  1G77 A;  2NR4 A;  2D37 A;  3R5L A;  1NRG A;  2OL5 A;  3AWH A;  2HTD A;  2I51 A;  2I02 A;  2R0X A;  3R5P A;  1WV4 A;  4N7R C;  2PTF A;  1W3Q A;  1G76 A;  3K87 A;  4HMS A;  3AMF A;  2HQ7 A;  2ASF A;  2R6V A;  3BNK A;  4Y9I A;  3F7E A;  1W3O A;  2ECR A;  4IRA A;  3BA3 A;  3KYG A;  4QVB A;  1USC A;  2D36 A;  3DNH A;  2QEA A;  3ZOE A;  3SWJ A;  3RH7 A;  1USF A;  3BPK A;  3PFT A;  4HMU A;  3U0I A;  2ECU A;  4F07 A;  3ZOD A;  5JAB A;  2QCK A;  2Q9K A;  2RE7 A;  2HTI A;  2ED4 A;  2GJG A;  1RZ0 A;  1FLM A;  2A2J A;  1YOA A;  1RZ1 A;  1XXO A;  3NFW A;  1EJE A;  3TGV A;  3ZOG A;  3U35 A;  1TY9 A;  2IML A;  1AXJ A;  1DNL A;  1G78 A;  3U34 A;  2VPA A;  2IAB A;  4XJ2 A;  5CHE C;  1WLI A;  3DB0 A;  1XHN A;  3CP3 A;  3IN6 A;  2OU5 A;  4L82 A;  3KYF A;  3ZOH A;  2ARZ A;  4HX6 A;  3FGE A;  3U5W A;  1VL7 A;  2FG9 A;  2FUR A;  3R5Y A;  2X1J A;  2IG6 A;  4HMW A;  1W3R A;  3A6Q A;  1CI0 A;  2X1K A;  3R5R A;  3HMZ A;  4YBN A;  4XHY A;  3E4V A;  3HY8 A;  1I0R A;  3EC6 A;  3K86 A;  2D38 A;  3B5M A;  3A20 A;  3CB0 A;  1I0S A;  5CHO A;  3K88 A;  2D5M A;  1W3P A;  3H96 A;  3GAS A;  2RDE A;  3R5Z A;  5ESC A;  3ZOC A;  1YLN A;  4ZKY A;  3VY5 A;  1WGB A;  4HMT A;  1W9A A;  4YWN A;  2HHZ A;  5BNC A;  4Z85 A; 
1USFA 3ZOEA 3ZOFA 3ZOHA
similar chains in the Genus database (40% sequence similarity)
None
similar chains in the pdb database (40% sequence similarity)

 
#similar chains in the Genus database (40% sequence similarity)
1USF A; 3ZOE A; 3ZOF A; 3ZOH A; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)


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