2D38A

The crystal structure of flavin reductase hpac complexed with nadp+
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
156
structure length
156
Chain Sequence
MAEVIKSIMRKFPLGVAIVTTNWKGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTDNEELFNIFALKPVKERFREIKYKEGIGGCPILYDSYAYIEAKLYDTIDVGDHSIIVGEVIDGYQIRDNFTPLVYMNRKYYKLSSL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-15)S11 (143-146)S2 (17-23)S8 (101-103)TIV1 (22-25)3H2 (97-99)S5 (44-50)TIV2 (32-35)S4 (36-39)TVIII1 (39-42)S10 (123-135)TIV3 (40-43)TI1 (50-53)AH2 (55-61)TI2 (51-54)S9 (106-120)EMPTYS6 (64-70)TI5 (103-106)TI3 (86-89)TIV4 (87-90)3H1 (84-86)S7 (93-95)TII'1 (120-123)S12 (149-152)TIV6 (145-148)AH1 (1-10)AH3 (73-81)S3 (26-32)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Sulfolobus tokodaii
publication title Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
pubmed doi rcsb
molecule keywords hypothetical NADH-dependent FMN oxidoreductase
total genus 37
structure length 156
sequence length 156
ec nomenclature ec 1.6.8.-:
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2d38A00
4XHYA 4L82A 3AMFA 1USFA 3U5WA 3SWJA 1I0RA 3TGVA 1TY9A 2NR4A 3K86A 3R5LA 3ZOEA 1DNLA 3B5MA 1WV4A 1RZ1A 1W9AA 2A2JA 3CP3A 2HQ9A 1CI0A 3K88A 3ZOFA 1RZ0A 3DNHA 4ZKYA 3AWHA 1W3PA 1YLNA 4N7RC 2QCKA 1W3OA 4R82A 4YBNA 3DB0A 4XJ2A 3VYAA 3E4VA 2X1KA 2PTFA 3FKHA 3CB0A 3ZOGA 4IRAA 3FGEA 3KYFA 1USCA 1WLKA 4HMTA 3VY2A 3ZODA 2ED4A 1XXOA 1WGBA 2R6VA 3A20A 5CHOA 1NRGA 2I51A 2HTIA 4Z85A 4QVBA 5ESCA 2VPAA 4Y9IA 1G77A 2RDEA 3R5ZA 1Y30A 2R0XA 3U0IA 3GASA 1T9MA 4HX6A 2FG9A 3ZOHA 3KYGA 2I02A 2IMLA 3R5YA 2OU5A 2AQ6A 4HMXA 5JABA 3U34A 4F07A 2RE7A 3U35A 1EJEA 3BA3A 3NFWA 3HY8A 2ARZA 3IN6A 2OL5A 4HMSA 3VY5A 1W3QA 3BNKA 2IG6A 1G76A 3H96A 3EC6A 3R5WA 3DMBA 3PFTA 4HMVA 1RFEA 3A6QA 2FURA 1JNWA 3HMZA 1FLMA 3R5PA 1YOAA 1VL7A 4HMUA 2D36A 1XHNA 2GJGA 4HMWA 2ECUA 2ASFA 1W3RA 2E83A 1G79A 2X1JA 3RH7A 3A6RA 2D38A 2ECRA 2QEAA 2D37A 2HQ7A 2Q9KA 1WLIA 2HHZA 2HTDA 3K87A 3R5RA 5BNCA 2IABA 3ZOCA 1AXJA 4YWNA 2FHQA 3F7EA 3BPKA 1G78A 2D5MA 1I0SA 5CHEC
chains in the Genus database with same CATH superfamily
4XHYA 4L82A 3AMFA 1USFA 3U5WA 3SWJA 1I0RA 3TGVA 1TY9A 2NR4A 3K86A 3R5LA 3ZOEA 1DNLA 3B5MA 1WV4A 1RZ1A 1W9AA 2A2JA 3CP3A 2HQ9A 1CI0A 3K88A 3ZOFA 1RZ0A 4UHVA 3EAAA 3DNHA 4ZKYA 3AWHA 1W3PA 1YLNA 4N7RC 1Y12A 2QCKA 1W3OA 4R82A 4YBNA 3DB0A 4XJ2A 3VYAA 3E4VA 2X1KA 2PTFA 3FKHA 3CB0A 3ZOGA 4IRAA 3FGEA 3KYFA 1USCA 1WLKA 4HMTA 3VY2A 3ZODA 2ED4A 1XXOA 1WGBA 2R6VA 2K4QA 3A20A 3V4HA 5CHOA 1NRGA 2I51A 2HTIA 4Z85A 4QVBA 5ESCA 2VPAA 2GUJA 4Y9IA 1G77A 2RDEA 3R5ZA 1Y30A 2R0XA 3U0IA 3GASA 1T9MA 4HX6A 2FG9A 3ZOHA 3KYGA 2I02A 2IMLA 3R5YA 2OU5A 2AQ6A 4HMXA 5JABA 3U34A 4F07A 2RE7A 3U35A 1EJEA 3BA3A 3NFWA 3HY8A 2ARZA 3IN6A 2OL5A 4HMSA 3HE1A 3VY5A 1W3QA 3BNKA 2IG6A 1G76A 3H96A 3EC6A 4MTKA 3R5WA 3DMBA 3PFTA 4HMVA 2L1TA 1RFEA 3A6QA 2FURA 1JNWA 3HMZA 1FLMA 3R5PA 4TV4A 1YOAA 1VL7A 4HMUA 2D36A 1XHNA 2GJGA 4HMWA 2ECUA 2ASFA 1W3RA 2E83A 1G79A 2X1JA 3RH7A 3A6RA 2D38A 2ECRA 2QEAA 2D37A 2HQ7A 2Q9KA 1WLIA 2HHZA 2HTDA 3K87A 2P5ZX 3R5RA 4HKHA 5BNCA 2IABA 3ZOCA 1AXJA 4YWNA 2FHQA 3F7EA 3BPKA 1G78A 2D5MA 4W64A 1I0SA 5CHEC
chains in the Genus database with same CATH topology
4XHYA 4L82A 3AMFA 1USFA 3U5WA 3SWJA 1I0RA 3TGVA 1TY9A 2NR4A 3K86A 3R5LA 3ZOEA 1DNLA 3B5MA 1WV4A 1RZ1A 1W9AA 2A2JA 3CP3A 2HQ9A 1CI0A 3K88A 3ZOFA 1RZ0A 3DNHA 4ZKYA 3AWHA 1W3PA 1YLNA 4N7RC 2QCKA 1W3OA 4R82A 4YBNA 3DB0A 4XJ2A 3VYAA 3E4VA 2X1KA 2PTFA 3FKHA 3CB0A 3ZOGA 4IRAA 3FGEA 3KYFA 1USCA 1WLKA 4HMTA 3VY2A 3ZODA 2ED4A 1XXOA 1WGBA 2R6VA 3A20A 5CHOA 1NRGA 2I51A 2HTIA 4Z85A 4QVBA 5ESCA 2VPAA 4Y9IA 1G77A 2RDEA 3R5ZA 1Y30A 2R0XA 3U0IA 3GASA 1T9MA 4HX6A 2FG9A 3ZOHA 3KYGA 2I02A 2IMLA 3R5YA 2OU5A 2AQ6A 4HMXA 5JABA 3U34A 4F07A 2RE7A 3U35A 1EJEA 3BA3A 3NFWA 3HY8A 2ARZA 3IN6A 2OL5A 4HMSA 3VY5A 1W3QA 3BNKA 2IG6A 1G76A 3H96A 3EC6A 3R5WA 3DMBA 3PFTA 4HMVA 1RFEA 3A6QA 2FURA 1JNWA 3HMZA 1FLMA 3R5PA 1YOAA 1VL7A 4HMUA 2D36A 1XHNA 2GJGA 4HMWA 2ECUA 2ASFA 1W3RA 2E83A 1G79A 2X1JA 3RH7A 3A6RA 2D38A 2ECRA 2QEAA 2D37A 2HQ7A 2Q9KA 1WLIA 2HHZA 2HTDA 3K87A 3R5RA 5BNCA 2IABA 3ZOCA 1AXJA 4YWNA 2FHQA 3F7EA 3BPKA 1G78A 2D5MA 1I0SA 5CHEC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4XHY A;  4L82 A;  3AMF A;  1USF A;  3U5W A;  3SWJ A;  1I0R A;  3TGV A;  1TY9 A;  2NR4 A;  3K86 A;  3R5L A;  3ZOE A;  1DNL A;  3B5M A;  1WV4 A;  1RZ1 A;  1W9A A;  2A2J A;  3CP3 A;  2HQ9 A;  1CI0 A;  3K88 A;  3ZOF A;  1RZ0 A;  3DNH A;  4ZKY A;  3AWH A;  1W3P A;  1YLN A;  4N7R C;  2QCK A;  1W3O A;  4R82 A;  4YBN A;  3DB0 A;  4XJ2 A;  3VYA A;  3E4V A;  2X1K A;  2PTF A;  3FKH A;  3CB0 A;  3ZOG A;  4IRA A;  3FGE A;  3KYF A;  1USC A;  1WLK A;  4HMT A;  3VY2 A;  3ZOD A;  2ED4 A;  1XXO A;  1WGB A;  2R6V A;  3A20 A;  5CHO A;  1NRG A;  2I51 A;  2HTI A;  4Z85 A;  4QVB A;  5ESC A;  2VPA A;  4Y9I A;  1G77 A;  2RDE A;  3R5Z A;  1Y30 A;  2R0X A;  3U0I A;  3GAS A;  1T9M A;  4HX6 A;  2FG9 A;  3ZOH A;  3KYG A;  2I02 A;  2IML A;  3R5Y A;  2OU5 A;  2AQ6 A;  4HMX A;  5JAB A;  3U34 A;  4F07 A;  2RE7 A;  3U35 A;  1EJE A;  3BA3 A;  3NFW A;  3HY8 A;  2ARZ A;  3IN6 A;  2OL5 A;  4HMS A;  3VY5 A;  1W3Q A;  3BNK A;  2IG6 A;  1G76 A;  3H96 A;  3EC6 A;  3R5W A;  3DMB A;  3PFT A;  4HMV A;  1RFE A;  3A6Q A;  2FUR A;  1JNW A;  3HMZ A;  1FLM A;  3R5P A;  1YOA A;  1VL7 A;  4HMU A;  2D36 A;  1XHN A;  2GJG A;  4HMW A;  2ECU A;  2ASF A;  1W3R A;  2E83 A;  1G79 A;  2X1J A;  3RH7 A;  3A6R A;  2D38 A;  2ECR A;  2QEA A;  2D37 A;  2HQ7 A;  2Q9K A;  1WLI A;  2HHZ A;  2HTD A;  3K87 A;  3R5R A;  5BNC A;  2IAB A;  3ZOC A;  1AXJ A;  4YWN A;  2FHQ A;  3F7E A;  3BPK A;  1G78 A;  2D5M A;  1I0S A;  5CHE C; 
#chains in the Genus database with same CATH topology
 4XHY A;  4L82 A;  3AMF A;  1USF A;  3U5W A;  3SWJ A;  1I0R A;  3TGV A;  1TY9 A;  2NR4 A;  3K86 A;  3R5L A;  3ZOE A;  1DNL A;  3B5M A;  1WV4 A;  1RZ1 A;  1W9A A;  2A2J A;  3CP3 A;  2HQ9 A;  1CI0 A;  3K88 A;  3ZOF A;  1RZ0 A;  4UHV A;  3EAA A;  3DNH A;  4ZKY A;  3AWH A;  1W3P A;  1YLN A;  4N7R C;  1Y12 A;  2QCK A;  1W3O A;  4R82 A;  4YBN A;  3DB0 A;  4XJ2 A;  3VYA A;  3E4V A;  2X1K A;  2PTF A;  3FKH A;  3CB0 A;  3ZOG A;  4IRA A;  3FGE A;  3KYF A;  1USC A;  1WLK A;  4HMT A;  3VY2 A;  3ZOD A;  2ED4 A;  1XXO A;  1WGB A;  2R6V A;  2K4Q A;  3A20 A;  3V4H A;  5CHO A;  1NRG A;  2I51 A;  2HTI A;  4Z85 A;  4QVB A;  5ESC A;  2VPA A;  2GUJ A;  4Y9I A;  1G77 A;  2RDE A;  3R5Z A;  1Y30 A;  2R0X A;  3U0I A;  3GAS A;  1T9M A;  4HX6 A;  2FG9 A;  3ZOH A;  3KYG A;  2I02 A;  2IML A;  3R5Y A;  2OU5 A;  2AQ6 A;  4HMX A;  5JAB A;  3U34 A;  4F07 A;  2RE7 A;  3U35 A;  1EJE A;  3BA3 A;  3NFW A;  3HY8 A;  2ARZ A;  3IN6 A;  2OL5 A;  4HMS A;  3HE1 A;  3VY5 A;  1W3Q A;  3BNK A;  2IG6 A;  1G76 A;  3H96 A;  3EC6 A;  4MTK A;  3R5W A;  3DMB A;  3PFT A;  4HMV A;  2L1T A;  1RFE A;  3A6Q A;  2FUR A;  1JNW A;  3HMZ A;  1FLM A;  3R5P A;  4TV4 A;  1YOA A;  1VL7 A;  4HMU A;  2D36 A;  1XHN A;  2GJG A;  4HMW A;  2ECU A;  2ASF A;  1W3R A;  2E83 A;  1G79 A;  2X1J A;  3RH7 A;  3A6R A;  2D38 A;  2ECR A;  2QEA A;  2D37 A;  2HQ7 A;  2Q9K A;  1WLI A;  2HHZ A;  2HTD A;  3K87 A;  2P5Z X;  3R5R A;  4HKH A;  5BNC A;  2IAB A;  3ZOC A;  1AXJ A;  4YWN A;  2FHQ A;  3F7E A;  3BPK A;  1G78 A;  2D5M A;  4W64 A;  1I0S A;  5CHE C; 
#chains in the Genus database with same CATH homology
 4XHY A;  4L82 A;  3AMF A;  1USF A;  3U5W A;  3SWJ A;  1I0R A;  3TGV A;  1TY9 A;  2NR4 A;  3K86 A;  3R5L A;  3ZOE A;  1DNL A;  3B5M A;  1WV4 A;  1RZ1 A;  1W9A A;  2A2J A;  3CP3 A;  2HQ9 A;  1CI0 A;  3K88 A;  3ZOF A;  1RZ0 A;  3DNH A;  4ZKY A;  3AWH A;  1W3P A;  1YLN A;  4N7R C;  2QCK A;  1W3O A;  4R82 A;  4YBN A;  3DB0 A;  4XJ2 A;  3VYA A;  3E4V A;  2X1K A;  2PTF A;  3FKH A;  3CB0 A;  3ZOG A;  4IRA A;  3FGE A;  3KYF A;  1USC A;  1WLK A;  4HMT A;  3VY2 A;  3ZOD A;  2ED4 A;  1XXO A;  1WGB A;  2R6V A;  3A20 A;  5CHO A;  1NRG A;  2I51 A;  2HTI A;  4Z85 A;  4QVB A;  5ESC A;  2VPA A;  4Y9I A;  1G77 A;  2RDE A;  3R5Z A;  1Y30 A;  2R0X A;  3U0I A;  3GAS A;  1T9M A;  4HX6 A;  2FG9 A;  3ZOH A;  3KYG A;  2I02 A;  2IML A;  3R5Y A;  2OU5 A;  2AQ6 A;  4HMX A;  5JAB A;  3U34 A;  4F07 A;  2RE7 A;  3U35 A;  1EJE A;  3BA3 A;  3NFW A;  3HY8 A;  2ARZ A;  3IN6 A;  2OL5 A;  4HMS A;  3VY5 A;  1W3Q A;  3BNK A;  2IG6 A;  1G76 A;  3H96 A;  3EC6 A;  3R5W A;  3DMB A;  3PFT A;  4HMV A;  1RFE A;  3A6Q A;  2FUR A;  1JNW A;  3HMZ A;  1FLM A;  3R5P A;  1YOA A;  1VL7 A;  4HMU A;  2D36 A;  1XHN A;  2GJG A;  4HMW A;  2ECU A;  2ASF A;  1W3R A;  2E83 A;  1G79 A;  2X1J A;  3RH7 A;  3A6R A;  2D38 A;  2ECR A;  2QEA A;  2D37 A;  2HQ7 A;  2Q9K A;  1WLI A;  2HHZ A;  2HTD A;  3K87 A;  3R5R A;  5BNC A;  2IAB A;  3ZOC A;  1AXJ A;  4YWN A;  2FHQ A;  3F7E A;  3BPK A;  1G78 A;  2D5M A;  1I0S A;  5CHE C; 
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