2D38A

The crystal structure of flavin reductase hpac complexed with nadp+
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
156
structure length
156
Chain Sequence
MAEVIKSIMRKFPLGVAIVTTNWKGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTDNEELFNIFALKPVKERFREIKYKEGIGGCPILYDSYAYIEAKLYDTIDVGDHSIIVGEVIDGYQIRDNFTPLVYMNRKYYKLSSL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-15)S11 (143-146)S2 (17-23)S8 (101-103)TIV1 (22-25)3H2 (97-99)S5 (44-50)TIV2 (32-35)S4 (36-39)TVIII1 (39-42)S10 (123-135)TIV3 (40-43)TI1 (50-53)AH2 (55-61)TI2 (51-54)S9 (106-120)EMPTYS6 (64-70)TI5 (103-106)TI3 (86-89)TIV4 (87-90)3H1 (84-86)S7 (93-95)TII'1 (120-123)S12 (149-152)TIV6 (145-148)AH1 (1-10)AH3 (73-81)S3 (26-32)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Sulfolobus tokodaii
publication title Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
pubmed doi rcsb
molecule keywords hypothetical NADH-dependent FMN oxidoreductase
total genus 37
structure length 156
sequence length 156
ec nomenclature ec 1.6.8.-:
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2d38A00
3CB0A 2HQ9A 1T9MA 1WV4A 2ARZA 3DMBA 3HY8A 3R5LA 3R5ZA 4HMWA 2NR4A 2HTDA 2AQ6A 4HMSA 3SWJA 3AMFA 2D5MA 3ZOEA 2OU5A 1XXOA 1WLKA 3BNKA 2I51A 1W3PA 1USFA 3K86A 1RZ0A 3R5RA 3A6RA 1RFEA 2QEAA 3VY2A 2HHZA 2R0XA 1EJEA 3CP3A 4QVBA 1G76A 3BA3A 3U0IA 1W9AA 2QCKA 4L82A 2ECRA 2D38A 2ED4A 5ESCA 3EC6A 2VPAA 4YWNA 3F7EA 3GASA 4XJ2A 2OL5A 3ZODA 2HTIA 1W3RA 1Y30A 3VY5A 3K88A 1TY9A 2RE7A 4HX6A 3A6QA 1W3QA 1G77A 1I0SA 4HMXA 4IRAA 3BPKA 3B5MA 2FHQA 1XHNA 2D36A 3PFTA 2IG6A 1DNLA 3U35A 1W3OA 4HMUA 3ZOHA 2ECUA 1AXJA 1JNWA 2FURA 3AWHA 2R6VA 1G78A 3K87A 5JABA 1G79A 2E83A 3KYFA 4HMVA 1VL7A 4Z85A 2X1KA 4HMTA 2HQ7A 1YLNA 2PTFA 4Y9IA 3H96A 1I0RA 1CI0A 3ZOFA 3U5WA 1YOAA 5BNCA 3A20A 3R5PA 4R82A 3U34A 2I02A 2RDEA 2Q9KA 3RH7A 4F07A 1USCA 2GJGA 2IMLA 2ASFA 3DB0A 3NFWA 1WGBA 3KYGA 3R5WA 1FLMA 2IABA 3ZOCA 5CHEC 3IN6A 2A2JA 4XHYA 3R5YA 2D37A 1RZ1A 1WLIA 4YBNA 2FG9A 3ZOGA 3FGEA 4N7RC 3TGVA 1NRGA 3FKHA 2X1JA 3E4VA 3VYAA 3HMZA 4ZKYA 3DNHA 5CHOA
chains in the Genus database with same CATH superfamily
4TV4A 3CB0A 2HQ9A 4UHVA 1T9MA 1WV4A 2ARZA 3DMBA 3HY8A 3R5LA 3R5ZA 4HMWA 2NR4A 2HTDA 2AQ6A 4HMSA 3SWJA 3AMFA 2D5MA 3ZOEA 2OU5A 1XXOA 1WLKA 3BNKA 2I51A 1W3PA 1USFA 3K86A 1RZ0A 3R5RA 3A6RA 1RFEA 2QEAA 3VY2A 2HHZA 2R0XA 1EJEA 3CP3A 4QVBA 1G76A 3BA3A 3U0IA 1W9AA 2QCKA 4L82A 2ECRA 2D38A 2ED4A 5ESCA 3EC6A 2VPAA 4YWNA 3F7EA 3GASA 4XJ2A 2OL5A 3ZODA 2HTIA 1W3RA 1Y30A 3VY5A 3K88A 1TY9A 2RE7A 4HX6A 3A6QA 4MTKA 1W3QA 1G77A 1I0SA 4HMXA 4IRAA 3BPKA 3B5MA 1Y12A 2FHQA 1XHNA 2D36A 3PFTA 2IG6A 1DNLA 3U35A 1W3OA 4HMUA 3ZOHA 2ECUA 1AXJA 1JNWA 2FURA 3AWHA 2R6VA 1G78A 3EAAA 3K87A 5JABA 1G79A 2E83A 3KYFA 4HMVA 1VL7A 4Z85A 2X1KA 2P5ZX 4HMTA 2HQ7A 1YLNA 2PTFA 4Y9IA 3H96A 1I0RA 1CI0A 3ZOFA 3U5WA 1YOAA 5BNCA 3A20A 3R5PA 4R82A 3U34A 3V4HA 2I02A 2RDEA 2Q9KA 3HE1A 3RH7A 4F07A 1USCA 2GJGA 2IMLA 2ASFA 3DB0A 3NFWA 1WGBA 3KYGA 3R5WA 1FLMA 2IABA 3ZOCA 5CHEC 4HKHA 3IN6A 2A2JA 4XHYA 3R5YA 2D37A 2L1TA 1RZ1A 1WLIA 4W64A 4YBNA 2FG9A 3ZOGA 3FGEA 4N7RC 2K4QA 3TGVA 1NRGA 3FKHA 2X1JA 3E4VA 3VYAA 2GUJA 3HMZA 4ZKYA 3DNHA 5CHOA
chains in the Genus database with same CATH topology
3CB0A 2HQ9A 1T9MA 1WV4A 2ARZA 3DMBA 3HY8A 3R5LA 3R5ZA 4HMWA 2NR4A 2HTDA 2AQ6A 4HMSA 3SWJA 3AMFA 2D5MA 3ZOEA 2OU5A 1XXOA 1WLKA 3BNKA 2I51A 1W3PA 1USFA 3K86A 1RZ0A 3R5RA 3A6RA 1RFEA 2QEAA 3VY2A 2HHZA 2R0XA 1EJEA 3CP3A 4QVBA 1G76A 3BA3A 3U0IA 1W9AA 2QCKA 4L82A 2ECRA 2D38A 2ED4A 5ESCA 3EC6A 2VPAA 4YWNA 3F7EA 3GASA 4XJ2A 2OL5A 3ZODA 2HTIA 1W3RA 1Y30A 3VY5A 3K88A 1TY9A 2RE7A 4HX6A 3A6QA 1W3QA 1G77A 1I0SA 4HMXA 4IRAA 3BPKA 3B5MA 2FHQA 1XHNA 2D36A 3PFTA 2IG6A 1DNLA 3U35A 1W3OA 4HMUA 3ZOHA 2ECUA 1AXJA 1JNWA 2FURA 3AWHA 2R6VA 1G78A 3K87A 5JABA 1G79A 2E83A 3KYFA 4HMVA 1VL7A 4Z85A 2X1KA 4HMTA 2HQ7A 1YLNA 2PTFA 4Y9IA 3H96A 1I0RA 1CI0A 3ZOFA 3U5WA 1YOAA 5BNCA 3A20A 3R5PA 4R82A 3U34A 2I02A 2RDEA 2Q9KA 3RH7A 4F07A 1USCA 2GJGA 2IMLA 2ASFA 3DB0A 3NFWA 1WGBA 3KYGA 3R5WA 1FLMA 2IABA 3ZOCA 5CHEC 3IN6A 2A2JA 4XHYA 3R5YA 2D37A 1RZ1A 1WLIA 4YBNA 2FG9A 3ZOGA 3FGEA 4N7RC 3TGVA 1NRGA 3FKHA 2X1JA 3E4VA 3VYAA 3HMZA 4ZKYA 3DNHA 5CHOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CB0 A;  2HQ9 A;  1T9M A;  1WV4 A;  2ARZ A;  3DMB A;  3HY8 A;  3R5L A;  3R5Z A;  4HMW A;  2NR4 A;  2HTD A;  2AQ6 A;  4HMS A;  3SWJ A;  3AMF A;  2D5M A;  3ZOE A;  2OU5 A;  1XXO A;  1WLK A;  3BNK A;  2I51 A;  1W3P A;  1USF A;  3K86 A;  1RZ0 A;  3R5R A;  3A6R A;  1RFE A;  2QEA A;  3VY2 A;  2HHZ A;  2R0X A;  1EJE A;  3CP3 A;  4QVB A;  1G76 A;  3BA3 A;  3U0I A;  1W9A A;  2QCK A;  4L82 A;  2ECR A;  2D38 A;  2ED4 A;  5ESC A;  3EC6 A;  2VPA A;  4YWN A;  3F7E A;  3GAS A;  4XJ2 A;  2OL5 A;  3ZOD A;  2HTI A;  1W3R A;  1Y30 A;  3VY5 A;  3K88 A;  1TY9 A;  2RE7 A;  4HX6 A;  3A6Q A;  1W3Q A;  1G77 A;  1I0S A;  4HMX A;  4IRA A;  3BPK A;  3B5M A;  2FHQ A;  1XHN A;  2D36 A;  3PFT A;  2IG6 A;  1DNL A;  3U35 A;  1W3O A;  4HMU A;  3ZOH A;  2ECU A;  1AXJ A;  1JNW A;  2FUR A;  3AWH A;  2R6V A;  1G78 A;  3K87 A;  5JAB A;  1G79 A;  2E83 A;  3KYF A;  4HMV A;  1VL7 A;  4Z85 A;  2X1K A;  4HMT A;  2HQ7 A;  1YLN A;  2PTF A;  4Y9I A;  3H96 A;  1I0R A;  1CI0 A;  3ZOF A;  3U5W A;  1YOA A;  5BNC A;  3A20 A;  3R5P A;  4R82 A;  3U34 A;  2I02 A;  2RDE A;  2Q9K A;  3RH7 A;  4F07 A;  1USC A;  2GJG A;  2IML A;  2ASF A;  3DB0 A;  3NFW A;  1WGB A;  3KYG A;  3R5W A;  1FLM A;  2IAB A;  3ZOC A;  5CHE C;  3IN6 A;  2A2J A;  4XHY A;  3R5Y A;  2D37 A;  1RZ1 A;  1WLI A;  4YBN A;  2FG9 A;  3ZOG A;  3FGE A;  4N7R C;  3TGV A;  1NRG A;  3FKH A;  2X1J A;  3E4V A;  3VYA A;  3HMZ A;  4ZKY A;  3DNH A;  5CHO A; 
#chains in the Genus database with same CATH topology
 4TV4 A;  3CB0 A;  2HQ9 A;  4UHV A;  1T9M A;  1WV4 A;  2ARZ A;  3DMB A;  3HY8 A;  3R5L A;  3R5Z A;  4HMW A;  2NR4 A;  2HTD A;  2AQ6 A;  4HMS A;  3SWJ A;  3AMF A;  2D5M A;  3ZOE A;  2OU5 A;  1XXO A;  1WLK A;  3BNK A;  2I51 A;  1W3P A;  1USF A;  3K86 A;  1RZ0 A;  3R5R A;  3A6R A;  1RFE A;  2QEA A;  3VY2 A;  2HHZ A;  2R0X A;  1EJE A;  3CP3 A;  4QVB A;  1G76 A;  3BA3 A;  3U0I A;  1W9A A;  2QCK A;  4L82 A;  2ECR A;  2D38 A;  2ED4 A;  5ESC A;  3EC6 A;  2VPA A;  4YWN A;  3F7E A;  3GAS A;  4XJ2 A;  2OL5 A;  3ZOD A;  2HTI A;  1W3R A;  1Y30 A;  3VY5 A;  3K88 A;  1TY9 A;  2RE7 A;  4HX6 A;  3A6Q A;  4MTK A;  1W3Q A;  1G77 A;  1I0S A;  4HMX A;  4IRA A;  3BPK A;  3B5M A;  1Y12 A;  2FHQ A;  1XHN A;  2D36 A;  3PFT A;  2IG6 A;  1DNL A;  3U35 A;  1W3O A;  4HMU A;  3ZOH A;  2ECU A;  1AXJ A;  1JNW A;  2FUR A;  3AWH A;  2R6V A;  1G78 A;  3EAA A;  3K87 A;  5JAB A;  1G79 A;  2E83 A;  3KYF A;  4HMV A;  1VL7 A;  4Z85 A;  2X1K A;  2P5Z X;  4HMT A;  2HQ7 A;  1YLN A;  2PTF A;  4Y9I A;  3H96 A;  1I0R A;  1CI0 A;  3ZOF A;  3U5W A;  1YOA A;  5BNC A;  3A20 A;  3R5P A;  4R82 A;  3U34 A;  3V4H A;  2I02 A;  2RDE A;  2Q9K A;  3HE1 A;  3RH7 A;  4F07 A;  1USC A;  2GJG A;  2IML A;  2ASF A;  3DB0 A;  3NFW A;  1WGB A;  3KYG A;  3R5W A;  1FLM A;  2IAB A;  3ZOC A;  5CHE C;  4HKH A;  3IN6 A;  2A2J A;  4XHY A;  3R5Y A;  2D37 A;  2L1T A;  1RZ1 A;  1WLI A;  4W64 A;  4YBN A;  2FG9 A;  3ZOG A;  3FGE A;  4N7R C;  2K4Q A;  3TGV A;  1NRG A;  3FKH A;  2X1J A;  3E4V A;  3VYA A;  2GUJ A;  3HMZ A;  4ZKY A;  3DNH A;  5CHO A; 
#chains in the Genus database with same CATH homology
 3CB0 A;  2HQ9 A;  1T9M A;  1WV4 A;  2ARZ A;  3DMB A;  3HY8 A;  3R5L A;  3R5Z A;  4HMW A;  2NR4 A;  2HTD A;  2AQ6 A;  4HMS A;  3SWJ A;  3AMF A;  2D5M A;  3ZOE A;  2OU5 A;  1XXO A;  1WLK A;  3BNK A;  2I51 A;  1W3P A;  1USF A;  3K86 A;  1RZ0 A;  3R5R A;  3A6R A;  1RFE A;  2QEA A;  3VY2 A;  2HHZ A;  2R0X A;  1EJE A;  3CP3 A;  4QVB A;  1G76 A;  3BA3 A;  3U0I A;  1W9A A;  2QCK A;  4L82 A;  2ECR A;  2D38 A;  2ED4 A;  5ESC A;  3EC6 A;  2VPA A;  4YWN A;  3F7E A;  3GAS A;  4XJ2 A;  2OL5 A;  3ZOD A;  2HTI A;  1W3R A;  1Y30 A;  3VY5 A;  3K88 A;  1TY9 A;  2RE7 A;  4HX6 A;  3A6Q A;  1W3Q A;  1G77 A;  1I0S A;  4HMX A;  4IRA A;  3BPK A;  3B5M A;  2FHQ A;  1XHN A;  2D36 A;  3PFT A;  2IG6 A;  1DNL A;  3U35 A;  1W3O A;  4HMU A;  3ZOH A;  2ECU A;  1AXJ A;  1JNW A;  2FUR A;  3AWH A;  2R6V A;  1G78 A;  3K87 A;  5JAB A;  1G79 A;  2E83 A;  3KYF A;  4HMV A;  1VL7 A;  4Z85 A;  2X1K A;  4HMT A;  2HQ7 A;  1YLN A;  2PTF A;  4Y9I A;  3H96 A;  1I0R A;  1CI0 A;  3ZOF A;  3U5W A;  1YOA A;  5BNC A;  3A20 A;  3R5P A;  4R82 A;  3U34 A;  2I02 A;  2RDE A;  2Q9K A;  3RH7 A;  4F07 A;  1USC A;  2GJG A;  2IML A;  2ASF A;  3DB0 A;  3NFW A;  1WGB A;  3KYG A;  3R5W A;  1FLM A;  2IAB A;  3ZOC A;  5CHE C;  3IN6 A;  2A2J A;  4XHY A;  3R5Y A;  2D37 A;  1RZ1 A;  1WLI A;  4YBN A;  2FG9 A;  3ZOG A;  3FGE A;  4N7R C;  3TGV A;  1NRG A;  3FKH A;  2X1J A;  3E4V A;  3VYA A;  3HMZ A;  4ZKY A;  3DNH A;  5CHO A; 
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