2D38A

The crystal structure of flavin reductase hpac complexed with nadp+
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
156
structure length
156
Chain Sequence
MAEVIKSIMRKFPLGVAIVTTNWKGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTDNEELFNIFALKPVKERFREIKYKEGIGGCPILYDSYAYIEAKLYDTIDVGDHSIIVGEVIDGYQIRDNFTPLVYMNRKYYKLSSL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-15)S11 (143-146)S2 (17-23)S8 (101-103)TIV1 (22-25)3H2 (97-99)S5 (44-50)TIV2 (32-35)S4 (36-39)TVIII1 (39-42)S10 (123-135)TIV3 (40-43)TI1 (50-53)AH2 (55-61)TI2 (51-54)S9 (106-120)EMPTYS6 (64-70)TI5 (103-106)TI3 (86-89)TIV4 (87-90)3H1 (84-86)S7 (93-95)TII'1 (120-123)S12 (149-152)TIV6 (145-148)AH1 (1-10)AH3 (73-81)S3 (26-32)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Sulfolobus tokodaii
publication title Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
pubmed doi rcsb
molecule keywords hypothetical NADH-dependent FMN oxidoreductase
total genus 37
structure length 156
sequence length 156
ec nomenclature ec 1.6.8.-:
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2d38A00
2HTIA 3A6RA 3U35A 4QVBA 2X1KA 1G77A 1TY9A 1W3OA 5BNCA 2X1JA 4XHYA 3CB0A 1USFA 1DNLA 3K87A 4YWNA 1T9MA 3B5MA 2GJGA 4Y9IA 1G78A 2IMLA 3DB0A 4L82A 3ZOGA 5CHEC 3U0IA 4YBNA 2A2JA 2VPAA 3GASA 4N7RC 3FGEA 1USCA 4ZKYA 1G79A 2I51A 3A6QA 2ECRA 2FURA 2FG9A 3R5PA 3R5ZA 4HMTA 5JABA 3EC6A 4R82A 1WLIA 3R5WA 3DMBA 2RDEA 2AQ6A 3ZOEA 3CP3A 1VL7A 2E83A 3TGVA 1XXOA 4HMUA 1RFEA 1RZ0A 5ESCA 2ARZA 1YOAA 3F7EA 3VYAA 1I0SA 1XHNA 3BNKA 2OU5A 2ASFA 4HX6A 3HY8A 4HMSA 3R5YA 1WV4A 1FLMA 2Q9KA 2IABA 1AXJA 3HMZA 1Y30A 4HMXA 2OL5A 2D36A 2IG6A 1JNWA 2HTDA 4HMWA 1WLKA 1W3QA 1W3PA 2PTFA 3SWJA 3BPKA 3H96A 3K88A 4F07A 3K86A 3ZOFA 1CI0A 3DNHA 3FKHA 3R5RA 3KYGA 1I0RA 1W3RA 2FHQA 2D38A 3VY2A 2QEAA 1RZ1A 2NR4A 3RH7A 3VY5A 2ED4A 3AWHA 2I02A 3BA3A 2HQ9A 5CHOA 2QCKA 2D5MA 2R0XA 1EJEA 2ECUA 3U34A 1W9AA 2R6VA 3PFTA 4XJ2A 4Z85A 2D37A 3IN6A 3ZODA 3E4VA 3U5WA 2RE7A 1YLNA 3NFWA 3R5LA 3ZOHA 3AMFA 4HMVA 4IRAA 1NRGA 1WGBA 1G76A 2HHZA 3KYFA 3ZOCA 2HQ7A 3A20A
chains in the Genus database with same CATH superfamily
2HTIA 3A6RA 3U35A 4QVBA 2X1KA 1G77A 1TY9A 1W3OA 5BNCA 2X1JA 4XHYA 3CB0A 1USFA 1DNLA 3K87A 2L1TA 4YWNA 1T9MA 3B5MA 2GJGA 4Y9IA 1G78A 2IMLA 3DB0A 4L82A 3ZOGA 5CHEC 3U0IA 4YBNA 3V4HA 2A2JA 2VPAA 3GASA 4N7RC 3FGEA 1USCA 2GUJA 4ZKYA 1G79A 2I51A 2ECRA 3A6QA 2FURA 2FG9A 3R5PA 3R5ZA 4HMTA 5JABA 3EC6A 4R82A 1WLIA 3R5WA 3DMBA 2RDEA 2AQ6A 3ZOEA 3CP3A 4HKHA 1VL7A 2E83A 3TGVA 1XXOA 4HMUA 1RFEA 1RZ0A 5ESCA 2ARZA 1YOAA 3F7EA 3VYAA 1I0SA 1XHNA 3BNKA 2OU5A 2ASFA 4HX6A 3HY8A 2K4QA 4HMSA 3R5YA 1WV4A 1FLMA 2Q9KA 2IABA 1AXJA 3HMZA 1Y30A 4HMXA 2OL5A 2D36A 2IG6A 1Y12A 1JNWA 2HTDA 4HMWA 1WLKA 1W3QA 1W3PA 2PTFA 3SWJA 3BPKA 3H96A 3K88A 4F07A 3K86A 3ZOFA 1CI0A 3DNHA 3FKHA 3R5RA 4MTKA 3KYGA 4TV4A 1I0RA 3HE1A 1W3RA 2FHQA 2D38A 3VY2A 2QEAA 1RZ1A 2NR4A 3RH7A 3VY5A 2ED4A 3AWHA 2I02A 3BA3A 2HQ9A 5CHOA 4UHVA 3EAAA 2QCKA 2D5MA 2R0XA 1EJEA 2ECUA 3U34A 1W9AA 2R6VA 3PFTA 4XJ2A 4Z85A 2D37A 3IN6A 3ZODA 3E4VA 3U5WA 2RE7A 1YLNA 3NFWA 3R5LA 3ZOHA 3AMFA 4HMVA 4IRAA 1NRGA 2P5ZX 1WGBA 1G76A 2HHZA 3KYFA 3ZOCA 2HQ7A 3A20A 4W64A
chains in the Genus database with same CATH topology
2HTIA 3A6RA 3U35A 4QVBA 2X1KA 1G77A 1TY9A 1W3OA 5BNCA 2X1JA 4XHYA 3CB0A 1USFA 1DNLA 3K87A 4YWNA 1T9MA 3B5MA 2GJGA 4Y9IA 1G78A 2IMLA 3DB0A 4L82A 3ZOGA 5CHEC 3U0IA 4YBNA 2A2JA 2VPAA 3GASA 4N7RC 3FGEA 1USCA 4ZKYA 1G79A 2I51A 3A6QA 2ECRA 2FURA 2FG9A 3R5PA 3R5ZA 4HMTA 5JABA 3EC6A 4R82A 1WLIA 3R5WA 3DMBA 2RDEA 2AQ6A 3ZOEA 3CP3A 1VL7A 2E83A 3TGVA 1XXOA 4HMUA 1RFEA 1RZ0A 5ESCA 2ARZA 1YOAA 3F7EA 3VYAA 1I0SA 1XHNA 3BNKA 2OU5A 2ASFA 4HX6A 3HY8A 4HMSA 3R5YA 1WV4A 1FLMA 2Q9KA 2IABA 1AXJA 3HMZA 1Y30A 4HMXA 2OL5A 2D36A 2IG6A 1JNWA 2HTDA 4HMWA 1WLKA 1W3QA 1W3PA 2PTFA 3SWJA 3BPKA 3H96A 3K88A 4F07A 3K86A 3ZOFA 1CI0A 3DNHA 3FKHA 3R5RA 3KYGA 1I0RA 1W3RA 2FHQA 2D38A 3VY2A 2QEAA 1RZ1A 2NR4A 3RH7A 3VY5A 2ED4A 3AWHA 2I02A 3BA3A 2HQ9A 5CHOA 2QCKA 2D5MA 2R0XA 1EJEA 2ECUA 3U34A 1W9AA 2R6VA 3PFTA 4XJ2A 4Z85A 2D37A 3IN6A 3ZODA 3E4VA 3U5WA 2RE7A 1YLNA 3NFWA 3R5LA 3ZOHA 3AMFA 4HMVA 4IRAA 1NRGA 1WGBA 1G76A 2HHZA 3KYFA 3ZOCA 2HQ7A 3A20A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HTI A;  3A6R A;  3U35 A;  4QVB A;  2X1K A;  1G77 A;  1TY9 A;  1W3O A;  5BNC A;  2X1J A;  4XHY A;  3CB0 A;  1USF A;  1DNL A;  3K87 A;  4YWN A;  1T9M A;  3B5M A;  2GJG A;  4Y9I A;  1G78 A;  2IML A;  3DB0 A;  4L82 A;  3ZOG A;  5CHE C;  3U0I A;  4YBN A;  2A2J A;  2VPA A;  3GAS A;  4N7R C;  3FGE A;  1USC A;  4ZKY A;  1G79 A;  2I51 A;  3A6Q A;  2ECR A;  2FUR A;  2FG9 A;  3R5P A;  3R5Z A;  4HMT A;  5JAB A;  3EC6 A;  4R82 A;  1WLI A;  3R5W A;  3DMB A;  2RDE A;  2AQ6 A;  3ZOE A;  3CP3 A;  1VL7 A;  2E83 A;  3TGV A;  1XXO A;  4HMU A;  1RFE A;  1RZ0 A;  5ESC A;  2ARZ A;  1YOA A;  3F7E A;  3VYA A;  1I0S A;  1XHN A;  3BNK A;  2OU5 A;  2ASF A;  4HX6 A;  3HY8 A;  4HMS A;  3R5Y A;  1WV4 A;  1FLM A;  2Q9K A;  2IAB A;  1AXJ A;  3HMZ A;  1Y30 A;  4HMX A;  2OL5 A;  2D36 A;  2IG6 A;  1JNW A;  2HTD A;  4HMW A;  1WLK A;  1W3Q A;  1W3P A;  2PTF A;  3SWJ A;  3BPK A;  3H96 A;  3K88 A;  4F07 A;  3K86 A;  3ZOF A;  1CI0 A;  3DNH A;  3FKH A;  3R5R A;  3KYG A;  1I0R A;  1W3R A;  2FHQ A;  2D38 A;  3VY2 A;  2QEA A;  1RZ1 A;  2NR4 A;  3RH7 A;  3VY5 A;  2ED4 A;  3AWH A;  2I02 A;  3BA3 A;  2HQ9 A;  5CHO A;  2QCK A;  2D5M A;  2R0X A;  1EJE A;  2ECU A;  3U34 A;  1W9A A;  2R6V A;  3PFT A;  4XJ2 A;  4Z85 A;  2D37 A;  3IN6 A;  3ZOD A;  3E4V A;  3U5W A;  2RE7 A;  1YLN A;  3NFW A;  3R5L A;  3ZOH A;  3AMF A;  4HMV A;  4IRA A;  1NRG A;  1WGB A;  1G76 A;  2HHZ A;  3KYF A;  3ZOC A;  2HQ7 A;  3A20 A; 
#chains in the Genus database with same CATH topology
 2HTI A;  3A6R A;  3U35 A;  4QVB A;  2X1K A;  1G77 A;  1TY9 A;  1W3O A;  5BNC A;  2X1J A;  4XHY A;  3CB0 A;  1USF A;  1DNL A;  3K87 A;  2L1T A;  4YWN A;  1T9M A;  3B5M A;  2GJG A;  4Y9I A;  1G78 A;  2IML A;  3DB0 A;  4L82 A;  3ZOG A;  5CHE C;  3U0I A;  4YBN A;  3V4H A;  2A2J A;  2VPA A;  3GAS A;  4N7R C;  3FGE A;  1USC A;  2GUJ A;  4ZKY A;  1G79 A;  2I51 A;  2ECR A;  3A6Q A;  2FUR A;  2FG9 A;  3R5P A;  3R5Z A;  4HMT A;  5JAB A;  3EC6 A;  4R82 A;  1WLI A;  3R5W A;  3DMB A;  2RDE A;  2AQ6 A;  3ZOE A;  3CP3 A;  4HKH A;  1VL7 A;  2E83 A;  3TGV A;  1XXO A;  4HMU A;  1RFE A;  1RZ0 A;  5ESC A;  2ARZ A;  1YOA A;  3F7E A;  3VYA A;  1I0S A;  1XHN A;  3BNK A;  2OU5 A;  2ASF A;  4HX6 A;  3HY8 A;  2K4Q A;  4HMS A;  3R5Y A;  1WV4 A;  1FLM A;  2Q9K A;  2IAB A;  1AXJ A;  3HMZ A;  1Y30 A;  4HMX A;  2OL5 A;  2D36 A;  2IG6 A;  1Y12 A;  1JNW A;  2HTD A;  4HMW A;  1WLK A;  1W3Q A;  1W3P A;  2PTF A;  3SWJ A;  3BPK A;  3H96 A;  3K88 A;  4F07 A;  3K86 A;  3ZOF A;  1CI0 A;  3DNH A;  3FKH A;  3R5R A;  4MTK A;  3KYG A;  4TV4 A;  1I0R A;  3HE1 A;  1W3R A;  2FHQ A;  2D38 A;  3VY2 A;  2QEA A;  1RZ1 A;  2NR4 A;  3RH7 A;  3VY5 A;  2ED4 A;  3AWH A;  2I02 A;  3BA3 A;  2HQ9 A;  5CHO A;  4UHV A;  3EAA A;  2QCK A;  2D5M A;  2R0X A;  1EJE A;  2ECU A;  3U34 A;  1W9A A;  2R6V A;  3PFT A;  4XJ2 A;  4Z85 A;  2D37 A;  3IN6 A;  3ZOD A;  3E4V A;  3U5W A;  2RE7 A;  1YLN A;  3NFW A;  3R5L A;  3ZOH A;  3AMF A;  4HMV A;  4IRA A;  1NRG A;  2P5Z X;  1WGB A;  1G76 A;  2HHZ A;  3KYF A;  3ZOC A;  2HQ7 A;  3A20 A;  4W64 A; 
#chains in the Genus database with same CATH homology
 2HTI A;  3A6R A;  3U35 A;  4QVB A;  2X1K A;  1G77 A;  1TY9 A;  1W3O A;  5BNC A;  2X1J A;  4XHY A;  3CB0 A;  1USF A;  1DNL A;  3K87 A;  4YWN A;  1T9M A;  3B5M A;  2GJG A;  4Y9I A;  1G78 A;  2IML A;  3DB0 A;  4L82 A;  3ZOG A;  5CHE C;  3U0I A;  4YBN A;  2A2J A;  2VPA A;  3GAS A;  4N7R C;  3FGE A;  1USC A;  4ZKY A;  1G79 A;  2I51 A;  3A6Q A;  2ECR A;  2FUR A;  2FG9 A;  3R5P A;  3R5Z A;  4HMT A;  5JAB A;  3EC6 A;  4R82 A;  1WLI A;  3R5W A;  3DMB A;  2RDE A;  2AQ6 A;  3ZOE A;  3CP3 A;  1VL7 A;  2E83 A;  3TGV A;  1XXO A;  4HMU A;  1RFE A;  1RZ0 A;  5ESC A;  2ARZ A;  1YOA A;  3F7E A;  3VYA A;  1I0S A;  1XHN A;  3BNK A;  2OU5 A;  2ASF A;  4HX6 A;  3HY8 A;  4HMS A;  3R5Y A;  1WV4 A;  1FLM A;  2Q9K A;  2IAB A;  1AXJ A;  3HMZ A;  1Y30 A;  4HMX A;  2OL5 A;  2D36 A;  2IG6 A;  1JNW A;  2HTD A;  4HMW A;  1WLK A;  1W3Q A;  1W3P A;  2PTF A;  3SWJ A;  3BPK A;  3H96 A;  3K88 A;  4F07 A;  3K86 A;  3ZOF A;  1CI0 A;  3DNH A;  3FKH A;  3R5R A;  3KYG A;  1I0R A;  1W3R A;  2FHQ A;  2D38 A;  3VY2 A;  2QEA A;  1RZ1 A;  2NR4 A;  3RH7 A;  3VY5 A;  2ED4 A;  3AWH A;  2I02 A;  3BA3 A;  2HQ9 A;  5CHO A;  2QCK A;  2D5M A;  2R0X A;  1EJE A;  2ECU A;  3U34 A;  1W9A A;  2R6V A;  3PFT A;  4XJ2 A;  4Z85 A;  2D37 A;  3IN6 A;  3ZOD A;  3E4V A;  3U5W A;  2RE7 A;  1YLN A;  3NFW A;  3R5L A;  3ZOH A;  3AMF A;  4HMV A;  4IRA A;  1NRG A;  1WGB A;  1G76 A;  2HHZ A;  3KYF A;  3ZOC A;  2HQ7 A;  3A20 A; 
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