2D38A

The crystal structure of flavin reductase hpac complexed with nadp+
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
156
structure length
156
Chain Sequence
MAEVIKSIMRKFPLGVAIVTTNWKGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTDNEELFNIFALKPVKERFREIKYKEGIGGCPILYDSYAYIEAKLYDTIDVGDHSIIVGEVIDGYQIRDNFTPLVYMNRKYYKLSSL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-15)S11 (143-146)S2 (17-23)S8 (101-103)TIV1 (22-25)3H2 (97-99)S5 (44-50)TIV2 (32-35)S4 (36-39)TVIII1 (39-42)S10 (123-135)TIV3 (40-43)TI1 (50-53)AH2 (55-61)TI2 (51-54)S9 (106-120)EMPTYS6 (64-70)TI5 (103-106)TI3 (86-89)TIV4 (87-90)3H1 (84-86)S7 (93-95)TII'1 (120-123)S12 (149-152)TIV6 (145-148)AH1 (1-10)AH3 (73-81)S3 (26-32)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Sulfolobus tokodaii
publication title Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
pubmed doi rcsb
molecule keywords hypothetical NADH-dependent FMN oxidoreductase
total genus 37
structure length 156
sequence length 156
ec nomenclature ec 1.6.8.-:
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2d38A00
3KYFA 3GASA 5BNCA 2VPAA 2D37A 3R5PA 1USFA 2D36A 2ECRA 2PTFA 3AMFA 2Q9KA 2OL5A 1G77A 1Y30A 3ZOHA 3NFWA 2X1KA 1AXJA 1WLKA 2HQ9A 3F7EA 3ZOCA 3BNKA 2IG6A 3VY2A 4HMVA 3BPKA 2GJGA 1G76A 2RE7A 3EC6A 3K88A 2D38A 1RZ1A 1RFEA 2AQ6A 3E4VA 4QVBA 4YBNA 1W3OA 2NR4A 3ZOGA 3VYAA 1I0RA 3U34A 1W9AA 3CB0A 3B5MA 3H96A 2ED4A 2OU5A 2E83A 4IRAA 1NRGA 3K87A 2I02A 2ARZA 3FKHA 4HMUA 1FLMA 3AWHA 2ASFA 1G78A 2R6VA 2FG9A 4N7RC 2QEAA 4R82A 5CHOA 3PFTA 5CHEC 3A6RA 1WGBA 3DMBA 1RZ0A 1G79A 3BA3A 2X1JA 4HMXA 3U0IA 2FHQA 1DNLA 1W3PA 2R0XA 5ESCA 2RDEA 1XHNA 1CI0A 1YLNA 3KYGA 1WV4A 1XXOA 4XJ2A 3R5WA 1I0SA 2IMLA 3FGEA 2D5MA 1VL7A 1W3QA 3CP3A 4ZKYA 2A2JA 4HX6A 4F07A 3RH7A 3K86A 3SWJA 2IABA 3R5YA 2HTDA 2HHZA 3ZOFA 1WLIA 1T9MA 1W3RA 4HMTA 2QCKA 5JABA 3HMZA 4L82A 4XHYA 3R5ZA 3DNHA 3TGVA 3R5RA 3IN6A 3DB0A 3ZOEA 1EJEA 4HMWA 4Y9IA 2FURA 1JNWA 1TY9A 4HMSA 1YOAA 2I51A 3U5WA 2HQ7A 3VY5A 2ECUA 3A6QA 3R5LA 3ZODA 3A20A 3HY8A 4Z85A 4YWNA 2HTIA 3U35A 1USCA
chains in the Genus database with same CATH superfamily
3KYFA 3GASA 5BNCA 2VPAA 2D37A 3R5PA 1USFA 2D36A 2ECRA 2PTFA 3AMFA 2Q9KA 2OL5A 1G77A 1Y30A 3ZOHA 3NFWA 2X1KA 3EAAA 1AXJA 1WLKA 2HQ9A 2L1TA 3F7EA 3ZOCA 3BNKA 2IG6A 3VY2A 4HMVA 1Y12A 3BPKA 2GJGA 1G76A 2RE7A 2GUJA 3EC6A 3K88A 2D38A 1RZ1A 3HE1A 1RFEA 2AQ6A 3E4VA 4QVBA 4YBNA 1W3OA 2NR4A 3ZOGA 3VYAA 1I0RA 3U34A 4TV4A 1W9AA 3CB0A 4HKHA 3B5MA 3H96A 2ED4A 2OU5A 2E83A 4IRAA 1NRGA 3K87A 2I02A 2ARZA 2P5ZX 3FKHA 4HMUA 1FLMA 3AWHA 2ASFA 1G78A 2R6VA 2FG9A 4N7RC 2QEAA 4R82A 5CHOA 3PFTA 5CHEC 3A6RA 1WGBA 3DMBA 1RZ0A 1G79A 3BA3A 2X1JA 4HMXA 3U0IA 2FHQA 1DNLA 1W3PA 2R0XA 5ESCA 2RDEA 4W64A 1XHNA 1CI0A 2K4QA 1YLNA 3KYGA 1WV4A 1XXOA 4XJ2A 3R5WA 1I0SA 2IMLA 3FGEA 2D5MA 1VL7A 1W3QA 3CP3A 4MTKA 4ZKYA 2A2JA 4HX6A 4F07A 3RH7A 3K86A 3SWJA 2IABA 3R5YA 2HTDA 2HHZA 3ZOFA 1WLIA 1T9MA 1W3RA 4HMTA 2QCKA 5JABA 3HMZA 4L82A 4XHYA 3R5ZA 3DNHA 3TGVA 3R5RA 3IN6A 3DB0A 3ZOEA 1EJEA 4HMWA 3V4HA 4Y9IA 2FURA 1JNWA 1TY9A 4UHVA 4HMSA 1YOAA 2I51A 3U5WA 2HQ7A 3VY5A 2ECUA 3A6QA 3R5LA 3ZODA 3A20A 3HY8A 4Z85A 4YWNA 2HTIA 3U35A 1USCA
chains in the Genus database with same CATH topology
3KYFA 3GASA 5BNCA 2VPAA 2D37A 3R5PA 1USFA 2D36A 2ECRA 2PTFA 3AMFA 2Q9KA 2OL5A 1G77A 1Y30A 3ZOHA 3NFWA 2X1KA 1AXJA 1WLKA 2HQ9A 3F7EA 3ZOCA 3BNKA 2IG6A 3VY2A 4HMVA 3BPKA 2GJGA 1G76A 2RE7A 3EC6A 3K88A 2D38A 1RZ1A 1RFEA 2AQ6A 3E4VA 4QVBA 4YBNA 1W3OA 2NR4A 3ZOGA 3VYAA 1I0RA 3U34A 1W9AA 3CB0A 3B5MA 3H96A 2ED4A 2OU5A 2E83A 4IRAA 1NRGA 3K87A 2I02A 2ARZA 3FKHA 4HMUA 1FLMA 3AWHA 2ASFA 1G78A 2R6VA 2FG9A 4N7RC 2QEAA 4R82A 5CHOA 3PFTA 5CHEC 3A6RA 1WGBA 3DMBA 1RZ0A 1G79A 3BA3A 2X1JA 4HMXA 3U0IA 2FHQA 1DNLA 1W3PA 2R0XA 5ESCA 2RDEA 1XHNA 1CI0A 1YLNA 3KYGA 1WV4A 1XXOA 4XJ2A 3R5WA 1I0SA 2IMLA 3FGEA 2D5MA 1VL7A 1W3QA 3CP3A 4ZKYA 2A2JA 4HX6A 4F07A 3RH7A 3K86A 3SWJA 2IABA 3R5YA 2HTDA 2HHZA 3ZOFA 1WLIA 1T9MA 1W3RA 4HMTA 2QCKA 5JABA 3HMZA 4L82A 4XHYA 3R5ZA 3DNHA 3TGVA 3R5RA 3IN6A 3DB0A 3ZOEA 1EJEA 4HMWA 4Y9IA 2FURA 1JNWA 1TY9A 4HMSA 1YOAA 2I51A 3U5WA 2HQ7A 3VY5A 2ECUA 3A6QA 3R5LA 3ZODA 3A20A 3HY8A 4Z85A 4YWNA 2HTIA 3U35A 1USCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KYF A;  3GAS A;  5BNC A;  2VPA A;  2D37 A;  3R5P A;  1USF A;  2D36 A;  2ECR A;  2PTF A;  3AMF A;  2Q9K A;  2OL5 A;  1G77 A;  1Y30 A;  3ZOH A;  3NFW A;  2X1K A;  1AXJ A;  1WLK A;  2HQ9 A;  3F7E A;  3ZOC A;  3BNK A;  2IG6 A;  3VY2 A;  4HMV A;  3BPK A;  2GJG A;  1G76 A;  2RE7 A;  3EC6 A;  3K88 A;  2D38 A;  1RZ1 A;  1RFE A;  2AQ6 A;  3E4V A;  4QVB A;  4YBN A;  1W3O A;  2NR4 A;  3ZOG A;  3VYA A;  1I0R A;  3U34 A;  1W9A A;  3CB0 A;  3B5M A;  3H96 A;  2ED4 A;  2OU5 A;  2E83 A;  4IRA A;  1NRG A;  3K87 A;  2I02 A;  2ARZ A;  3FKH A;  4HMU A;  1FLM A;  3AWH A;  2ASF A;  1G78 A;  2R6V A;  2FG9 A;  4N7R C;  2QEA A;  4R82 A;  5CHO A;  3PFT A;  5CHE C;  3A6R A;  1WGB A;  3DMB A;  1RZ0 A;  1G79 A;  3BA3 A;  2X1J A;  4HMX A;  3U0I A;  2FHQ A;  1DNL A;  1W3P A;  2R0X A;  5ESC A;  2RDE A;  1XHN A;  1CI0 A;  1YLN A;  3KYG A;  1WV4 A;  1XXO A;  4XJ2 A;  3R5W A;  1I0S A;  2IML A;  3FGE A;  2D5M A;  1VL7 A;  1W3Q A;  3CP3 A;  4ZKY A;  2A2J A;  4HX6 A;  4F07 A;  3RH7 A;  3K86 A;  3SWJ A;  2IAB A;  3R5Y A;  2HTD A;  2HHZ A;  3ZOF A;  1WLI A;  1T9M A;  1W3R A;  4HMT A;  2QCK A;  5JAB A;  3HMZ A;  4L82 A;  4XHY A;  3R5Z A;  3DNH A;  3TGV A;  3R5R A;  3IN6 A;  3DB0 A;  3ZOE A;  1EJE A;  4HMW A;  4Y9I A;  2FUR A;  1JNW A;  1TY9 A;  4HMS A;  1YOA A;  2I51 A;  3U5W A;  2HQ7 A;  3VY5 A;  2ECU A;  3A6Q A;  3R5L A;  3ZOD A;  3A20 A;  3HY8 A;  4Z85 A;  4YWN A;  2HTI A;  3U35 A;  1USC A; 
#chains in the Genus database with same CATH topology
 3KYF A;  3GAS A;  5BNC A;  2VPA A;  2D37 A;  3R5P A;  1USF A;  2D36 A;  2ECR A;  2PTF A;  3AMF A;  2Q9K A;  2OL5 A;  1G77 A;  1Y30 A;  3ZOH A;  3NFW A;  2X1K A;  3EAA A;  1AXJ A;  1WLK A;  2HQ9 A;  2L1T A;  3F7E A;  3ZOC A;  3BNK A;  2IG6 A;  3VY2 A;  4HMV A;  1Y12 A;  3BPK A;  2GJG A;  1G76 A;  2RE7 A;  2GUJ A;  3EC6 A;  3K88 A;  2D38 A;  1RZ1 A;  3HE1 A;  1RFE A;  2AQ6 A;  3E4V A;  4QVB A;  4YBN A;  1W3O A;  2NR4 A;  3ZOG A;  3VYA A;  1I0R A;  3U34 A;  4TV4 A;  1W9A A;  3CB0 A;  4HKH A;  3B5M A;  3H96 A;  2ED4 A;  2OU5 A;  2E83 A;  4IRA A;  1NRG A;  3K87 A;  2I02 A;  2ARZ A;  2P5Z X;  3FKH A;  4HMU A;  1FLM A;  3AWH A;  2ASF A;  1G78 A;  2R6V A;  2FG9 A;  4N7R C;  2QEA A;  4R82 A;  5CHO A;  3PFT A;  5CHE C;  3A6R A;  1WGB A;  3DMB A;  1RZ0 A;  1G79 A;  3BA3 A;  2X1J A;  4HMX A;  3U0I A;  2FHQ A;  1DNL A;  1W3P A;  2R0X A;  5ESC A;  2RDE A;  4W64 A;  1XHN A;  1CI0 A;  2K4Q A;  1YLN A;  3KYG A;  1WV4 A;  1XXO A;  4XJ2 A;  3R5W A;  1I0S A;  2IML A;  3FGE A;  2D5M A;  1VL7 A;  1W3Q A;  3CP3 A;  4MTK A;  4ZKY A;  2A2J A;  4HX6 A;  4F07 A;  3RH7 A;  3K86 A;  3SWJ A;  2IAB A;  3R5Y A;  2HTD A;  2HHZ A;  3ZOF A;  1WLI A;  1T9M A;  1W3R A;  4HMT A;  2QCK A;  5JAB A;  3HMZ A;  4L82 A;  4XHY A;  3R5Z A;  3DNH A;  3TGV A;  3R5R A;  3IN6 A;  3DB0 A;  3ZOE A;  1EJE A;  4HMW A;  3V4H A;  4Y9I A;  2FUR A;  1JNW A;  1TY9 A;  4UHV A;  4HMS A;  1YOA A;  2I51 A;  3U5W A;  2HQ7 A;  3VY5 A;  2ECU A;  3A6Q A;  3R5L A;  3ZOD A;  3A20 A;  3HY8 A;  4Z85 A;  4YWN A;  2HTI A;  3U35 A;  1USC A; 
#chains in the Genus database with same CATH homology
 3KYF A;  3GAS A;  5BNC A;  2VPA A;  2D37 A;  3R5P A;  1USF A;  2D36 A;  2ECR A;  2PTF A;  3AMF A;  2Q9K A;  2OL5 A;  1G77 A;  1Y30 A;  3ZOH A;  3NFW A;  2X1K A;  1AXJ A;  1WLK A;  2HQ9 A;  3F7E A;  3ZOC A;  3BNK A;  2IG6 A;  3VY2 A;  4HMV A;  3BPK A;  2GJG A;  1G76 A;  2RE7 A;  3EC6 A;  3K88 A;  2D38 A;  1RZ1 A;  1RFE A;  2AQ6 A;  3E4V A;  4QVB A;  4YBN A;  1W3O A;  2NR4 A;  3ZOG A;  3VYA A;  1I0R A;  3U34 A;  1W9A A;  3CB0 A;  3B5M A;  3H96 A;  2ED4 A;  2OU5 A;  2E83 A;  4IRA A;  1NRG A;  3K87 A;  2I02 A;  2ARZ A;  3FKH A;  4HMU A;  1FLM A;  3AWH A;  2ASF A;  1G78 A;  2R6V A;  2FG9 A;  4N7R C;  2QEA A;  4R82 A;  5CHO A;  3PFT A;  5CHE C;  3A6R A;  1WGB A;  3DMB A;  1RZ0 A;  1G79 A;  3BA3 A;  2X1J A;  4HMX A;  3U0I A;  2FHQ A;  1DNL A;  1W3P A;  2R0X A;  5ESC A;  2RDE A;  1XHN A;  1CI0 A;  1YLN A;  3KYG A;  1WV4 A;  1XXO A;  4XJ2 A;  3R5W A;  1I0S A;  2IML A;  3FGE A;  2D5M A;  1VL7 A;  1W3Q A;  3CP3 A;  4ZKY A;  2A2J A;  4HX6 A;  4F07 A;  3RH7 A;  3K86 A;  3SWJ A;  2IAB A;  3R5Y A;  2HTD A;  2HHZ A;  3ZOF A;  1WLI A;  1T9M A;  1W3R A;  4HMT A;  2QCK A;  5JAB A;  3HMZ A;  4L82 A;  4XHY A;  3R5Z A;  3DNH A;  3TGV A;  3R5R A;  3IN6 A;  3DB0 A;  3ZOE A;  1EJE A;  4HMW A;  4Y9I A;  2FUR A;  1JNW A;  1TY9 A;  4HMS A;  1YOA A;  2I51 A;  3U5W A;  2HQ7 A;  3VY5 A;  2ECU A;  3A6Q A;  3R5L A;  3ZOD A;  3A20 A;  3HY8 A;  4Z85 A;  4YWN A;  2HTI A;  3U35 A;  1USC A; 
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