2D38A

The crystal structure of flavin reductase hpac complexed with nadp+
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
156
structure length
156
Chain Sequence
MAEVIKSIMRKFPLGVAIVTTNWKGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTDNEELFNIFALKPVKERFREIKYKEGIGGCPILYDSYAYIEAKLYDTIDVGDHSIIVGEVIDGYQIRDNFTPLVYMNRKYYKLSSL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (14-15)S11 (143-146)S2 (17-23)S8 (101-103)TIV1 (22-25)3H2 (97-99)S5 (44-50)TIV2 (32-35)S4 (36-39)TVIII1 (39-42)S10 (123-135)TIV3 (40-43)TI1 (50-53)AH2 (55-61)TI2 (51-54)S9 (106-120)EMPTYS6 (64-70)TI5 (103-106)TI3 (86-89)TIV4 (87-90)3H1 (84-86)S7 (93-95)TII'1 (120-123)S12 (149-152)TIV6 (145-148)AH1 (1-10)AH3 (73-81)S3 (26-32)Updating...
connected with : NaN
publication title Crystal structures of the short-chain flavin reductase HpaC from Sulfolobus tokodaii strain 7 in its three states: NAD(P)(+)(-)free, NAD(+)(-)bound, and NADP(+)(-)bound
pubmed doi rcsb
molecule keywords hypothetical NADH-dependent FMN oxidoreductase
molecule tags Oxidoreductase
source organism Sulfolobus tokodaii
total genus 37
structure length 156
sequence length 156
ec nomenclature ec 1.6.8.-:
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2d38A00
2ECRA 5CHOA 1RZ0A 3PFTA 4HMSA 1W9AA 1WV4A 3VYAA 2HTIA 1WGBA 5JABA 3SWJA 2X1JA 3FKHA 2IABA 1I0RA 4HMUA 3ZOHA 3BNKA 1Y30A 3R5WA 3BA3A 2NR4A 3A20A 3DNHA 3ZOCA 3K86A 3U35A 2R6VA 3TGVA 3ZOGA 2ED4A 4HMTA 2E83A 1RZ1A 3CB0A 2HTDA 2VPAA 3F7EA 2IG6A 5CHEC 3K88A 1RFEA 3R5YA 5ESCA 1USFA 3U0IA 2IMLA 1JNWA 2ARZA 1NRGA 2I51A 1T9MA 3ZOFA 1YOAA 1VL7A 3A6QA 2A2JA 2OU5A 2PTFA 2HQ7A 3FGEA 3DB0A 4L82A 1W3RA 4HMVA 3U5WA 2QEAA 2I02A 3KYGA 1I0SA 1G76A 2RE7A 3H96A 1W3QA 4ZKYA 2HHZA 3GASA 1G78A 2ASFA 2D38A 3E4VA 2FG9A 1FLMA 3ZOEA 3KYFA 2FHQA 3NFWA 3CP3A 1AXJA 1G79A 4XJ2A 4HMXA 2RDEA 4Y9IA 3IN6A 3B5MA 3AMFA 2D5MA 4HMWA 4QVBA 3RH7A 4F07A 1XHNA 2HQ9A 4HX6A 3VY2A 1XXOA 3EC6A 4Z85A 5BNCA 2X1KA 2Q9KA 1USCA 3HMZA 1EJEA 2AQ6A 2QCKA 4R82A 3K87A 3R5LA 4YWNA 4YBNA 3U34A 1W3PA 1G77A 3A6RA 4IRAA 3R5RA 4XHYA 2D37A 1WLIA 2OL5A 2R0XA 1YLNA 2FURA 3DMBA 3BPKA 1DNLA 3R5PA 2GJGA 3HY8A 2ECUA 3AWHA 1W3OA 4N7RC 3VY5A 1TY9A 1WLKA 2D36A 1CI0A 3R5ZA 3ZODA
chains in the Genus database with same CATH superfamily
2ECRA 5CHOA 1RZ0A 3PFTA 4HMSA 1W9AA 1WV4A 3VYAA 2HTIA 1WGBA 5JABA 4TV4A 3SWJA 2X1JA 3FKHA 2P5ZX 2IABA 1I0RA 4HMUA 3ZOHA 3BNKA 1Y30A 3EAAA 3R5WA 3BA3A 2NR4A 2K4QA 3A20A 3DNHA 3ZOCA 3K86A 3U35A 2R6VA 3TGVA 3ZOGA 2ED4A 4HMTA 2E83A 1RZ1A 1Y12A 3CB0A 2HTDA 2VPAA 3F7EA 2IG6A 5CHEC 3K88A 1RFEA 3R5YA 5ESCA 1USFA 3U0IA 2IMLA 1JNWA 2ARZA 1NRGA 2I51A 1T9MA 3ZOFA 1YOAA 1VL7A 3A6QA 4W64A 2A2JA 2OU5A 2PTFA 3V4HA 2HQ7A 3FGEA 3DB0A 3HE1A 4L82A 1W3RA 4HMVA 3U5WA 2QEAA 2I02A 3KYGA 1I0SA 1G76A 2RE7A 3H96A 1W3QA 4ZKYA 2HHZA 3GASA 1G78A 2ASFA 2D38A 3E4VA 2FG9A 1FLMA 3ZOEA 3KYFA 2FHQA 3NFWA 3CP3A 1AXJA 1G79A 4XJ2A 4HKHA 2L1TA 4HMXA 2RDEA 4Y9IA 3IN6A 3B5MA 3AMFA 2D5MA 4HMWA 4QVBA 3RH7A 4F07A 1XHNA 2HQ9A 4HX6A 3VY2A 1XXOA 4MTKA 3EC6A 4UHVA 4Z85A 5BNCA 2X1KA 2Q9KA 1USCA 3HMZA 1EJEA 2AQ6A 2QCKA 4R82A 2GUJA 3K87A 3R5LA 4YWNA 4YBNA 3U34A 1W3PA 1G77A 3A6RA 4IRAA 3R5RA 4XHYA 2D37A 1WLIA 2OL5A 2R0XA 1YLNA 2FURA 3DMBA 3BPKA 1DNLA 3R5PA 2GJGA 3HY8A 2ECUA 3AWHA 1W3OA 4N7RC 3VY5A 1TY9A 1WLKA 2D36A 1CI0A 3R5ZA 3ZODA
chains in the Genus database with same CATH topology
2ECRA 5CHOA 1RZ0A 3PFTA 4HMSA 1W9AA 1WV4A 3VYAA 2HTIA 1WGBA 5JABA 3SWJA 2X1JA 3FKHA 2IABA 1I0RA 4HMUA 3ZOHA 3BNKA 1Y30A 3R5WA 3BA3A 2NR4A 3A20A 3DNHA 3ZOCA 3K86A 3U35A 2R6VA 3TGVA 3ZOGA 2ED4A 4HMTA 2E83A 1RZ1A 3CB0A 2HTDA 2VPAA 3F7EA 2IG6A 5CHEC 3K88A 1RFEA 3R5YA 5ESCA 1USFA 3U0IA 2IMLA 1JNWA 2ARZA 1NRGA 2I51A 1T9MA 3ZOFA 1YOAA 1VL7A 3A6QA 2A2JA 2OU5A 2PTFA 2HQ7A 3FGEA 3DB0A 4L82A 1W3RA 4HMVA 3U5WA 2QEAA 2I02A 3KYGA 1I0SA 1G76A 2RE7A 3H96A 1W3QA 4ZKYA 2HHZA 3GASA 1G78A 2ASFA 2D38A 3E4VA 2FG9A 1FLMA 3ZOEA 3KYFA 2FHQA 3NFWA 3CP3A 1AXJA 1G79A 4XJ2A 4HMXA 2RDEA 4Y9IA 3IN6A 3B5MA 3AMFA 2D5MA 4HMWA 4QVBA 3RH7A 4F07A 1XHNA 2HQ9A 4HX6A 3VY2A 1XXOA 3EC6A 4Z85A 5BNCA 2X1KA 2Q9KA 1USCA 3HMZA 1EJEA 2AQ6A 2QCKA 4R82A 3K87A 3R5LA 4YWNA 4YBNA 3U34A 1W3PA 1G77A 3A6RA 4IRAA 3R5RA 4XHYA 2D37A 1WLIA 2OL5A 2R0XA 1YLNA 2FURA 3DMBA 3BPKA 1DNLA 3R5PA 2GJGA 3HY8A 2ECUA 3AWHA 1W3OA 4N7RC 3VY5A 1TY9A 1WLKA 2D36A 1CI0A 3R5ZA 3ZODA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ECR A;  5CHO A;  1RZ0 A;  3PFT A;  4HMS A;  1W9A A;  1WV4 A;  3VYA A;  2HTI A;  1WGB A;  5JAB A;  3SWJ A;  2X1J A;  3FKH A;  2IAB A;  1I0R A;  4HMU A;  3ZOH A;  3BNK A;  1Y30 A;  3R5W A;  3BA3 A;  2NR4 A;  3A20 A;  3DNH A;  3ZOC A;  3K86 A;  3U35 A;  2R6V A;  3TGV A;  3ZOG A;  2ED4 A;  4HMT A;  2E83 A;  1RZ1 A;  3CB0 A;  2HTD A;  2VPA A;  3F7E A;  2IG6 A;  5CHE C;  3K88 A;  1RFE A;  3R5Y A;  5ESC A;  1USF A;  3U0I A;  2IML A;  1JNW A;  2ARZ A;  1NRG A;  2I51 A;  1T9M A;  3ZOF A;  1YOA A;  1VL7 A;  3A6Q A;  2A2J A;  2OU5 A;  2PTF A;  2HQ7 A;  3FGE A;  3DB0 A;  4L82 A;  1W3R A;  4HMV A;  3U5W A;  2QEA A;  2I02 A;  3KYG A;  1I0S A;  1G76 A;  2RE7 A;  3H96 A;  1W3Q A;  4ZKY A;  2HHZ A;  3GAS A;  1G78 A;  2ASF A;  2D38 A;  3E4V A;  2FG9 A;  1FLM A;  3ZOE A;  3KYF A;  2FHQ A;  3NFW A;  3CP3 A;  1AXJ A;  1G79 A;  4XJ2 A;  4HMX A;  2RDE A;  4Y9I A;  3IN6 A;  3B5M A;  3AMF A;  2D5M A;  4HMW A;  4QVB A;  3RH7 A;  4F07 A;  1XHN A;  2HQ9 A;  4HX6 A;  3VY2 A;  1XXO A;  3EC6 A;  4Z85 A;  5BNC A;  2X1K A;  2Q9K A;  1USC A;  3HMZ A;  1EJE A;  2AQ6 A;  2QCK A;  4R82 A;  3K87 A;  3R5L A;  4YWN A;  4YBN A;  3U34 A;  1W3P A;  1G77 A;  3A6R A;  4IRA A;  3R5R A;  4XHY A;  2D37 A;  1WLI A;  2OL5 A;  2R0X A;  1YLN A;  2FUR A;  3DMB A;  3BPK A;  1DNL A;  3R5P A;  2GJG A;  3HY8 A;  2ECU A;  3AWH A;  1W3O A;  4N7R C;  3VY5 A;  1TY9 A;  1WLK A;  2D36 A;  1CI0 A;  3R5Z A;  3ZOD A; 
#chains in the Genus database with same CATH topology
 2ECR A;  5CHO A;  1RZ0 A;  3PFT A;  4HMS A;  1W9A A;  1WV4 A;  3VYA A;  2HTI A;  1WGB A;  5JAB A;  4TV4 A;  3SWJ A;  2X1J A;  3FKH A;  2P5Z X;  2IAB A;  1I0R A;  4HMU A;  3ZOH A;  3BNK A;  1Y30 A;  3EAA A;  3R5W A;  3BA3 A;  2NR4 A;  2K4Q A;  3A20 A;  3DNH A;  3ZOC A;  3K86 A;  3U35 A;  2R6V A;  3TGV A;  3ZOG A;  2ED4 A;  4HMT A;  2E83 A;  1RZ1 A;  1Y12 A;  3CB0 A;  2HTD A;  2VPA A;  3F7E A;  2IG6 A;  5CHE C;  3K88 A;  1RFE A;  3R5Y A;  5ESC A;  1USF A;  3U0I A;  2IML A;  1JNW A;  2ARZ A;  1NRG A;  2I51 A;  1T9M A;  3ZOF A;  1YOA A;  1VL7 A;  3A6Q A;  4W64 A;  2A2J A;  2OU5 A;  2PTF A;  3V4H A;  2HQ7 A;  3FGE A;  3DB0 A;  3HE1 A;  4L82 A;  1W3R A;  4HMV A;  3U5W A;  2QEA A;  2I02 A;  3KYG A;  1I0S A;  1G76 A;  2RE7 A;  3H96 A;  1W3Q A;  4ZKY A;  2HHZ A;  3GAS A;  1G78 A;  2ASF A;  2D38 A;  3E4V A;  2FG9 A;  1FLM A;  3ZOE A;  3KYF A;  2FHQ A;  3NFW A;  3CP3 A;  1AXJ A;  1G79 A;  4XJ2 A;  4HKH A;  2L1T A;  4HMX A;  2RDE A;  4Y9I A;  3IN6 A;  3B5M A;  3AMF A;  2D5M A;  4HMW A;  4QVB A;  3RH7 A;  4F07 A;  1XHN A;  2HQ9 A;  4HX6 A;  3VY2 A;  1XXO A;  4MTK A;  3EC6 A;  4UHV A;  4Z85 A;  5BNC A;  2X1K A;  2Q9K A;  1USC A;  3HMZ A;  1EJE A;  2AQ6 A;  2QCK A;  4R82 A;  2GUJ A;  3K87 A;  3R5L A;  4YWN A;  4YBN A;  3U34 A;  1W3P A;  1G77 A;  3A6R A;  4IRA A;  3R5R A;  4XHY A;  2D37 A;  1WLI A;  2OL5 A;  2R0X A;  1YLN A;  2FUR A;  3DMB A;  3BPK A;  1DNL A;  3R5P A;  2GJG A;  3HY8 A;  2ECU A;  3AWH A;  1W3O A;  4N7R C;  3VY5 A;  1TY9 A;  1WLK A;  2D36 A;  1CI0 A;  3R5Z A;  3ZOD A; 
#chains in the Genus database with same CATH homology
 2ECR A;  5CHO A;  1RZ0 A;  3PFT A;  4HMS A;  1W9A A;  1WV4 A;  3VYA A;  2HTI A;  1WGB A;  5JAB A;  3SWJ A;  2X1J A;  3FKH A;  2IAB A;  1I0R A;  4HMU A;  3ZOH A;  3BNK A;  1Y30 A;  3R5W A;  3BA3 A;  2NR4 A;  3A20 A;  3DNH A;  3ZOC A;  3K86 A;  3U35 A;  2R6V A;  3TGV A;  3ZOG A;  2ED4 A;  4HMT A;  2E83 A;  1RZ1 A;  3CB0 A;  2HTD A;  2VPA A;  3F7E A;  2IG6 A;  5CHE C;  3K88 A;  1RFE A;  3R5Y A;  5ESC A;  1USF A;  3U0I A;  2IML A;  1JNW A;  2ARZ A;  1NRG A;  2I51 A;  1T9M A;  3ZOF A;  1YOA A;  1VL7 A;  3A6Q A;  2A2J A;  2OU5 A;  2PTF A;  2HQ7 A;  3FGE A;  3DB0 A;  4L82 A;  1W3R A;  4HMV A;  3U5W A;  2QEA A;  2I02 A;  3KYG A;  1I0S A;  1G76 A;  2RE7 A;  3H96 A;  1W3Q A;  4ZKY A;  2HHZ A;  3GAS A;  1G78 A;  2ASF A;  2D38 A;  3E4V A;  2FG9 A;  1FLM A;  3ZOE A;  3KYF A;  2FHQ A;  3NFW A;  3CP3 A;  1AXJ A;  1G79 A;  4XJ2 A;  4HMX A;  2RDE A;  4Y9I A;  3IN6 A;  3B5M A;  3AMF A;  2D5M A;  4HMW A;  4QVB A;  3RH7 A;  4F07 A;  1XHN A;  2HQ9 A;  4HX6 A;  3VY2 A;  1XXO A;  3EC6 A;  4Z85 A;  5BNC A;  2X1K A;  2Q9K A;  1USC A;  3HMZ A;  1EJE A;  2AQ6 A;  2QCK A;  4R82 A;  3K87 A;  3R5L A;  4YWN A;  4YBN A;  3U34 A;  1W3P A;  1G77 A;  3A6R A;  4IRA A;  3R5R A;  4XHY A;  2D37 A;  1WLI A;  2OL5 A;  2R0X A;  1YLN A;  2FUR A;  3DMB A;  3BPK A;  1DNL A;  3R5P A;  2GJG A;  3HY8 A;  2ECU A;  3AWH A;  1W3O A;  4N7R C;  3VY5 A;  1TY9 A;  1WLK A;  2D36 A;  1CI0 A;  3R5Z A;  3ZOD A; 
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