3H96A

Msmeg_3358 f420 reductase
Total Genus 39

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
137
structure length
137
Chain Sequence
DWNSQVIQEFRANGGRVGGNFEGAPMVLVHHVGRKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGTETYAVGVTEVTGEDRDRIYSEQARRYPGFADYEKKTAGIRTIPVLALTRT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (6-18)AH2 (75-83)TI'1 (18-21)EMPTY3H1 (24-26)TI1 (38-41)TII1 (26-29)S1 (33-37)S2 (44-47)TI2 (54-57)S3 (52-53)TIV2 (129-132)TII3 (128-131)TII2 (57-60)AH4 (119-128)S4 (60-64)3H2 (67-69)S6 (93-102)TII'1 (90-93)S5 (85-90)AH3 (104-117)Updating...
connected with : NaN
publication title Identification and characterization of two families of F420 H2-dependent reductases from Mycobacteria that catalyse aflatoxin degradation.
pubmed doi rcsb
molecule keywords F420-H2 Dependent Reductase A
molecule tags Flavoprotein
source organism Mycobacterium smegmatis str. mc2 155
total genus 39
structure length 137
sequence length 137
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2009-04-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04075 F420H2_quin_red F420H(2)-dependent quinone reductase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 3h96A00
4HMUA 3R5RA 3RH7A 1VL7A 5JABA 3DB0A 2R6VA 1W3RA 1RFEA 2NR4A 3R5PA 2I51A 3CP3A 2HTIA 4HMXA 2IABA 2X1KA 3R5LA 5BNCA 3K86A 3A20A 1WLIA 3HY8A 3U34A 3SWJA 3ZODA 3F7EA 1G79A 2Q9KA 2A2JA 2ED4A 1G77A 1W9AA 2FURA 1EJEA 3NFWA 1Y30A 4N7RC 2QEAA 2OU5A 2PTFA 2HQ7A 1USCA 4ZKYA 2ASFA 3AWHA 1YOAA 3KYGA 1WV4A 5CHEC 2R0XA 2D38A 1G78A 2I02A 4HX6A 4HMSA 2RE7A 1RZ1A 2GJGA 1CI0A 3U35A 1G76A 1XHNA 1WLKA 3R5ZA 3R5YA 2ECUA 2FG9A 3ZOFA 1W3OA 2IG6A 1I0RA 1NRGA 3GASA 2IMLA 3A6QA 3AMFA 3PFTA 3U5WA 4L82A 3KYFA 1DNLA 1TY9A 1WGBA 4IRAA 3B5MA 1RZ0A 2FHQA 3VY2A 1USFA 2D5MA 3HMZA 3H96A 4R82A 3DMBA 4F07A 2X1JA 4QVBA 5ESCA 3E4VA 3FKHA 2QCKA 4HMWA 2ARZA 4XHYA 1JNWA 3BNKA 4HMTA 3K87A 2RDEA 3BA3A 3EC6A 3FGEA 3BPKA 2E83A 3TGVA 2VPAA 2D36A 2HHZA 1W3PA 3U0IA 1T9MA 3ZOEA 4Z85A 1I0SA 4YBNA 3A6RA 3ZOHA 1AXJA 4HMVA 3VY5A 3K88A 2D37A 2ECRA 2HTDA 1YLNA 4XJ2A 3DNHA 2AQ6A 2HQ9A 3IN6A 2OL5A 3CB0A 3R5WA 5CHOA 3ZOCA 3VYAA 1FLMA 4Y9IA 1W3QA 1XXOA 4YWNA 3ZOGA
chains in the Genus database with same CATH superfamily
4HMUA 3R5RA 3RH7A 1VL7A 5JABA 3DB0A 2R6VA 1W3RA 1RFEA 2NR4A 3R5PA 4UHVA 2I51A 3CP3A 2HTIA 4HMXA 2IABA 2X1KA 4HKHA 3R5LA 5BNCA 3HE1A 3K86A 3A20A 1WLIA 3HY8A 4TV4A 4MTKA 3U34A 3SWJA 3ZODA 3F7EA 1G79A 2Q9KA 2A2JA 2ED4A 1G77A 1W9AA 2FURA 1EJEA 3V4HA 3NFWA 1Y30A 4N7RC 2QEAA 2OU5A 2PTFA 2HQ7A 1USCA 4ZKYA 2ASFA 3AWHA 1YOAA 3KYGA 2K4QA 1WV4A 5CHEC 2R0XA 2D38A 1G78A 2I02A 4HX6A 4HMSA 2RE7A 1RZ1A 2GJGA 1CI0A 3U35A 1G76A 1XHNA 1WLKA 3R5ZA 3R5YA 2ECUA 2FG9A 3ZOFA 1W3OA 3EAAA 2IG6A 1I0RA 1NRGA 3GASA 2IMLA 3A6QA 3AMFA 3PFTA 3U5WA 4L82A 3KYFA 1DNLA 1TY9A 1WGBA 4IRAA 3B5MA 1RZ0A 2FHQA 3VY2A 1USFA 2D5MA 3HMZA 3H96A 4R82A 3DMBA 4F07A 2X1JA 4QVBA 5ESCA 3E4VA 3FKHA 2QCKA 4W64A 4HMWA 2GUJA 2ARZA 4XHYA 2L1TA 1JNWA 3BNKA 4HMTA 3K87A 2RDEA 3BA3A 3EC6A 3FGEA 3BPKA 2E83A 3TGVA 2VPAA 2D36A 2HHZA 1W3PA 3U0IA 1T9MA 3ZOEA 4Z85A 1I0SA 4YBNA 3A6RA 3ZOHA 1AXJA 4HMVA 3VY5A 3K88A 2D37A 2ECRA 2HTDA 1Y12A 1YLNA 4XJ2A 3DNHA 2AQ6A 2HQ9A 3IN6A 2OL5A 3CB0A 3R5WA 5CHOA 3ZOCA 3VYAA 1FLMA 4Y9IA 2P5ZX 1W3QA 1XXOA 4YWNA 3ZOGA
chains in the Genus database with same CATH topology
4HMUA 3R5RA 3RH7A 1VL7A 5JABA 3DB0A 2R6VA 1W3RA 1RFEA 2NR4A 3R5PA 2I51A 3CP3A 2HTIA 4HMXA 2IABA 2X1KA 3R5LA 5BNCA 3K86A 3A20A 1WLIA 3HY8A 3U34A 3SWJA 3ZODA 3F7EA 1G79A 2Q9KA 2A2JA 2ED4A 1G77A 1W9AA 2FURA 1EJEA 3NFWA 1Y30A 4N7RC 2QEAA 2OU5A 2PTFA 2HQ7A 1USCA 4ZKYA 2ASFA 3AWHA 1YOAA 3KYGA 1WV4A 5CHEC 2R0XA 2D38A 1G78A 2I02A 4HX6A 4HMSA 2RE7A 1RZ1A 2GJGA 1CI0A 3U35A 1G76A 1XHNA 1WLKA 3R5ZA 3R5YA 2ECUA 2FG9A 3ZOFA 1W3OA 2IG6A 1I0RA 1NRGA 3GASA 2IMLA 3A6QA 3AMFA 3PFTA 3U5WA 4L82A 3KYFA 1DNLA 1TY9A 1WGBA 4IRAA 3B5MA 1RZ0A 2FHQA 3VY2A 1USFA 2D5MA 3HMZA 3H96A 4R82A 3DMBA 4F07A 2X1JA 4QVBA 5ESCA 3E4VA 3FKHA 2QCKA 4HMWA 2ARZA 4XHYA 1JNWA 3BNKA 4HMTA 3K87A 2RDEA 3BA3A 3EC6A 3FGEA 3BPKA 2E83A 3TGVA 2VPAA 2D36A 2HHZA 1W3PA 3U0IA 1T9MA 3ZOEA 4Z85A 1I0SA 4YBNA 3A6RA 3ZOHA 1AXJA 4HMVA 3VY5A 3K88A 2D37A 2ECRA 2HTDA 1YLNA 4XJ2A 3DNHA 2AQ6A 2HQ9A 3IN6A 2OL5A 3CB0A 3R5WA 5CHOA 3ZOCA 3VYAA 1FLMA 4Y9IA 1W3QA 1XXOA 4YWNA 3ZOGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4HMU A;  3R5R A;  3RH7 A;  1VL7 A;  5JAB A;  3DB0 A;  2R6V A;  1W3R A;  1RFE A;  2NR4 A;  3R5P A;  2I51 A;  3CP3 A;  2HTI A;  4HMX A;  2IAB A;  2X1K A;  3R5L A;  5BNC A;  3K86 A;  3A20 A;  1WLI A;  3HY8 A;  3U34 A;  3SWJ A;  3ZOD A;  3F7E A;  1G79 A;  2Q9K A;  2A2J A;  2ED4 A;  1G77 A;  1W9A A;  2FUR A;  1EJE A;  3NFW A;  1Y30 A;  4N7R C;  2QEA A;  2OU5 A;  2PTF A;  2HQ7 A;  1USC A;  4ZKY A;  2ASF A;  3AWH A;  1YOA A;  3KYG A;  1WV4 A;  5CHE C;  2R0X A;  2D38 A;  1G78 A;  2I02 A;  4HX6 A;  4HMS A;  2RE7 A;  1RZ1 A;  2GJG A;  1CI0 A;  3U35 A;  1G76 A;  1XHN A;  1WLK A;  3R5Z A;  3R5Y A;  2ECU A;  2FG9 A;  3ZOF A;  1W3O A;  2IG6 A;  1I0R A;  1NRG A;  3GAS A;  2IML A;  3A6Q A;  3AMF A;  3PFT A;  3U5W A;  4L82 A;  3KYF A;  1DNL A;  1TY9 A;  1WGB A;  4IRA A;  3B5M A;  1RZ0 A;  2FHQ A;  3VY2 A;  1USF A;  2D5M A;  3HMZ A;  3H96 A;  4R82 A;  3DMB A;  4F07 A;  2X1J A;  4QVB A;  5ESC A;  3E4V A;  3FKH A;  2QCK A;  4HMW A;  2ARZ A;  4XHY A;  1JNW A;  3BNK A;  4HMT A;  3K87 A;  2RDE A;  3BA3 A;  3EC6 A;  3FGE A;  3BPK A;  2E83 A;  3TGV A;  2VPA A;  2D36 A;  2HHZ A;  1W3P A;  3U0I A;  1T9M A;  3ZOE A;  4Z85 A;  1I0S A;  4YBN A;  3A6R A;  3ZOH A;  1AXJ A;  4HMV A;  3VY5 A;  3K88 A;  2D37 A;  2ECR A;  2HTD A;  1YLN A;  4XJ2 A;  3DNH A;  2AQ6 A;  2HQ9 A;  3IN6 A;  2OL5 A;  3CB0 A;  3R5W A;  5CHO A;  3ZOC A;  3VYA A;  1FLM A;  4Y9I A;  1W3Q A;  1XXO A;  4YWN A;  3ZOG A; 
#chains in the Genus database with same CATH topology
 4HMU A;  3R5R A;  3RH7 A;  1VL7 A;  5JAB A;  3DB0 A;  2R6V A;  1W3R A;  1RFE A;  2NR4 A;  3R5P A;  4UHV A;  2I51 A;  3CP3 A;  2HTI A;  4HMX A;  2IAB A;  2X1K A;  4HKH A;  3R5L A;  5BNC A;  3HE1 A;  3K86 A;  3A20 A;  1WLI A;  3HY8 A;  4TV4 A;  4MTK A;  3U34 A;  3SWJ A;  3ZOD A;  3F7E A;  1G79 A;  2Q9K A;  2A2J A;  2ED4 A;  1G77 A;  1W9A A;  2FUR A;  1EJE A;  3V4H A;  3NFW A;  1Y30 A;  4N7R C;  2QEA A;  2OU5 A;  2PTF A;  2HQ7 A;  1USC A;  4ZKY A;  2ASF A;  3AWH A;  1YOA A;  3KYG A;  2K4Q A;  1WV4 A;  5CHE C;  2R0X A;  2D38 A;  1G78 A;  2I02 A;  4HX6 A;  4HMS A;  2RE7 A;  1RZ1 A;  2GJG A;  1CI0 A;  3U35 A;  1G76 A;  1XHN A;  1WLK A;  3R5Z A;  3R5Y A;  2ECU A;  2FG9 A;  3ZOF A;  1W3O A;  3EAA A;  2IG6 A;  1I0R A;  1NRG A;  3GAS A;  2IML A;  3A6Q A;  3AMF A;  3PFT A;  3U5W A;  4L82 A;  3KYF A;  1DNL A;  1TY9 A;  1WGB A;  4IRA A;  3B5M A;  1RZ0 A;  2FHQ A;  3VY2 A;  1USF A;  2D5M A;  3HMZ A;  3H96 A;  4R82 A;  3DMB A;  4F07 A;  2X1J A;  4QVB A;  5ESC A;  3E4V A;  3FKH A;  2QCK A;  4W64 A;  4HMW A;  2GUJ A;  2ARZ A;  4XHY A;  2L1T A;  1JNW A;  3BNK A;  4HMT A;  3K87 A;  2RDE A;  3BA3 A;  3EC6 A;  3FGE A;  3BPK A;  2E83 A;  3TGV A;  2VPA A;  2D36 A;  2HHZ A;  1W3P A;  3U0I A;  1T9M A;  3ZOE A;  4Z85 A;  1I0S A;  4YBN A;  3A6R A;  3ZOH A;  1AXJ A;  4HMV A;  3VY5 A;  3K88 A;  2D37 A;  2ECR A;  2HTD A;  1Y12 A;  1YLN A;  4XJ2 A;  3DNH A;  2AQ6 A;  2HQ9 A;  3IN6 A;  2OL5 A;  3CB0 A;  3R5W A;  5CHO A;  3ZOC A;  3VYA A;  1FLM A;  4Y9I A;  2P5Z X;  1W3Q A;  1XXO A;  4YWN A;  3ZOG A; 
#chains in the Genus database with same CATH homology
 4HMU A;  3R5R A;  3RH7 A;  1VL7 A;  5JAB A;  3DB0 A;  2R6V A;  1W3R A;  1RFE A;  2NR4 A;  3R5P A;  2I51 A;  3CP3 A;  2HTI A;  4HMX A;  2IAB A;  2X1K A;  3R5L A;  5BNC A;  3K86 A;  3A20 A;  1WLI A;  3HY8 A;  3U34 A;  3SWJ A;  3ZOD A;  3F7E A;  1G79 A;  2Q9K A;  2A2J A;  2ED4 A;  1G77 A;  1W9A A;  2FUR A;  1EJE A;  3NFW A;  1Y30 A;  4N7R C;  2QEA A;  2OU5 A;  2PTF A;  2HQ7 A;  1USC A;  4ZKY A;  2ASF A;  3AWH A;  1YOA A;  3KYG A;  1WV4 A;  5CHE C;  2R0X A;  2D38 A;  1G78 A;  2I02 A;  4HX6 A;  4HMS A;  2RE7 A;  1RZ1 A;  2GJG A;  1CI0 A;  3U35 A;  1G76 A;  1XHN A;  1WLK A;  3R5Z A;  3R5Y A;  2ECU A;  2FG9 A;  3ZOF A;  1W3O A;  2IG6 A;  1I0R A;  1NRG A;  3GAS A;  2IML A;  3A6Q A;  3AMF A;  3PFT A;  3U5W A;  4L82 A;  3KYF A;  1DNL A;  1TY9 A;  1WGB A;  4IRA A;  3B5M A;  1RZ0 A;  2FHQ A;  3VY2 A;  1USF A;  2D5M A;  3HMZ A;  3H96 A;  4R82 A;  3DMB A;  4F07 A;  2X1J A;  4QVB A;  5ESC A;  3E4V A;  3FKH A;  2QCK A;  4HMW A;  2ARZ A;  4XHY A;  1JNW A;  3BNK A;  4HMT A;  3K87 A;  2RDE A;  3BA3 A;  3EC6 A;  3FGE A;  3BPK A;  2E83 A;  3TGV A;  2VPA A;  2D36 A;  2HHZ A;  1W3P A;  3U0I A;  1T9M A;  3ZOE A;  4Z85 A;  1I0S A;  4YBN A;  3A6R A;  3ZOH A;  1AXJ A;  4HMV A;  3VY5 A;  3K88 A;  2D37 A;  2ECR A;  2HTD A;  1YLN A;  4XJ2 A;  3DNH A;  2AQ6 A;  2HQ9 A;  3IN6 A;  2OL5 A;  3CB0 A;  3R5W A;  5CHO A;  3ZOC A;  3VYA A;  1FLM A;  4Y9I A;  1W3Q A;  1XXO A;  4YWN A;  3ZOG A; 
8D4WA
similar chains in the Genus database (40% sequence similarity)
None
similar chains in the pdb database (40% sequence similarity)

 
#similar chains in the Genus database (40% sequence similarity)
8D4W A; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)


Application loaded.