1JJOC

Crystal structure of mouse neuroserpin (cleaved form)
Total Genus 48

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
261
structure length
244
Chain Sequence
ENQYVMKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQNVAVANSINKWVENYTNSLLKDLVSPEDFDGVTNLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLALSRQEVPLATLEPLLKAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEFLSKAVHKSCIEVNEEGSEAAAASGMIAIS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTVIII4 (234-235)TIV1 (107-110)TIV6 (162-165)S1 (114-121)TVIII3 (194-197)S3 (182-193)TI1 (121-124)S2 (140-145)AH2 (150-162)TIV7 (163-166)TI'1 (165-168)TVIII2 (169-172)TI3 (179-180)S6 (227-229)S5 (214-224)TI2 (146-149)TIV3 (127-130)3H1 (175-177)S4 (199-210)TI6 (210-213)S7 (232-233)S8 (236-243)Updating...
connected with : NaN
molecule tags Signaling protein
source organism Mus musculus
publication title Crystal structure of neuroserpin: a neuronal serpin involved in a conformational disease.
pubmed doi rcsb
molecule keywords NEUROSERPIN
total genus 48
structure length 244
sequence length 261
chains with identical sequence D
ec nomenclature
pdb deposition date 2001-07-09
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 1jjoC02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 1jjoC01
1OVAA 2WXYC 3OZQA 4EB1L 5C98A 1E04I 2RIWA 1DVMA 1C8OA 3VVJA 1EZXA 4AU4A 1OVAB 3R4LA 5INWA 2XN6A 5HGCA 4IC0A 3FGQA 3ZHAA 4AQHA 1OYHI 1LJ5A 1JTIA 4RSQA 3T1PA 1TB6I 4EB1I 1PSIA 1T1FA 3EVJI 4YIAA 4AU3B 2QUGA 2ARQA 1JVQI 3DY0A 2RIVA 8APIA 1M93B 1JJOC 3Q02A 1YXAA 4P0FA 1BY7A 1LQ8A 1XU8A 3NE4A 2HIJI 2ACHA 2PEEA 5BRRI 2WXZC 4X30A 4DY7C 3CVMA 1SEKA 2WY1A 1DVNA 3H5CA 2R9YA 3DRUA 2ZNHA 1OVAC 5EI0A 9PAIA 1MTPA 1IZ2A 3NDFA 1JMOA 7APIA 1E03I 1OPHA 3UT3A 2V95A 3KCGI 2H4QA 2WXXA 9APIA 1JMJA 3DLWA 5CDXA 1D5SA 2H4PA 4DY0A 1K9OI 2BEHL 3CAAA 1DB2A 4GA7A 4ROBA 5IO1A 1NQ9I 2CEOA 4DTEA 3LE2A 1HLEA 1SR5A 3B9FI 1AZXI 3CWMA 2ZV6A 4RO9A 4P0OA 2DUTA 1DZHL 2HI9A 4ROAA 4CAAA 2OL2A 2ARRA 2BEHI 2XN7A 4ZK0A 3NDAA 4C49A 1XQGA 1WZ9A 2B5TI 4PYWA 1R1LI 4IF8A 1HP7A 1OC0A 3NDDA 1B3KA 3PZFA 4C41A 1SNGA 1ANTI 3CWLA 2B4XL 2VH4A 1DZHI 3STOA 2OAYA 2H4RA 4R9IA 1C5GA 2WY0C 2XN3A 4ZK3A 3DRMA 4AJUA 2VDXA 5CE0A 1OO8A 1LK6I 4BB2A 4G8RA 3F02A 1XQJA 3F5NA 4AFXA 4AU2A 1ATHA 1E05I 1JRRA 1QMBA 3PB1I 4KDSA 2GD4C 2B4XI 3F1SA 1IMVA 1QMNA 1ATTA 1DZGL 2XN5A 4Y3KA 3LW2A 1A7CA 2ANTI 2D26A 4AU3A 2HIJL 1F0CA 2PEFA 4G8OA 1AS4A 2VDYA 4Y40A 1UHGA 3Q03A 1QLPA 2WXZA 1BR8I 3EOXA 4AJTA 1ATUA 1KCTA 5CDZA 2WXWA 1DZGI 1OYHL
chains in the Genus database with same CATH superfamily
1OVAA 2WXYC 3OZQA 4EB1L 5C98A 1E04I 2RIWA 1DVMA 1C8OA 3VVJA 1EZXA 4AU4A 1OVAB 3R4LA 5INWA 2XN6A 5HGCA 4IC0A 3FGQA 3ZHAA 4AQHA 1OYHI 1LJ5A 1JTIA 4RSQA 3T1PA 1TB6I 4EB1I 1PSIA 1T1FA 3EVJI 4YIAA 4AU3B 2QUGA 2ARQA 1JVQI 3DY0A 2RIVA 8APIA 1M93B 1JJOC 3Q02A 1YXAA 4P0FA 1BY7A 1LQ8A 1XU8A 3NE4A 2HIJI 2ACHA 2PEEA 5BRRI 2WXZC 4X30A 4DY7C 3CVMA 1SEKA 2WY1A 1DVNA 3H5CA 2R9YA 3DRUA 2ZNHA 1OVAC 5EI0A 9PAIA 1MTPA 1IZ2A 3NDFA 1JMOA 7APIA 1E03I 1OPHA 3UT3A 2V95A 3KCGI 2H4QA 2WXXA 9APIA 1JMJA 3DLWA 5CDXA 1D5SA 2H4PA 4DY0A 1K9OI 2BEHL 3CAAA 1DB2A 4GA7A 4ROBA 5IO1A 1NQ9I 2CEOA 4DTEA 3LE2A 1HLEA 1SR5A 3B9FI 1AZXI 3CWMA 2ZV6A 4RO9A 4P0OA 2DUTA 1DZHL 2HI9A 4ROAA 4CAAA 2OL2A 2ARRA 2BEHI 2XN7A 4ZK0A 3NDAA 4C49A 1XQGA 1WZ9A 2B5TI 4PYWA 1R1LI 4IF8A 1HP7A 1OC0A 3NDDA 1B3KA 3PZFA 4C41A 1SNGA 1ANTI 3CWLA 2B4XL 2VH4A 1DZHI 3STOA 2OAYA 2H4RA 4R9IA 1C5GA 2WY0C 2XN3A 4ZK3A 3DRMA 4AJUA 2VDXA 5CE0A 1OO8A 1LK6I 4BB2A 4G8RA 3F02A 1XQJA 3F5NA 4AFXA 4AU2A 1ATHA 1E05I 1JRRA 1QMBA 3PB1I 4KDSA 2GD4C 2B4XI 3F1SA 1IMVA 1QMNA 1ATTA 1DZGL 2XN5A 4Y3KA 3LW2A 1A7CA 2ANTI 2D26A 4AU3A 2HIJL 1F0CA 2PEFA 4G8OA 1AS4A 2VDYA 4Y40A 1UHGA 3Q03A 1QLPA 2WXZA 1BR8I 3EOXA 4AJTA 1ATUA 1KCTA 5CDZA 2WXWA 1DZGI 1OYHL
chains in the Genus database with same CATH topology
1OVAA 2WXYC 3OZQA 4EB1L 5C98A 1E04I 2RIWA 1DVMA 1C8OA 3VVJA 1EZXA 4AU4A 1OVAB 3R4LA 5INWA 2XN6A 5HGCA 4IC0A 3FGQA 3ZHAA 4AQHA 1OYHI 1LJ5A 1JTIA 4RSQA 3T1PA 1TB6I 4EB1I 1PSIA 1T1FA 3EVJI 4YIAA 4AU3B 2QUGA 2ARQA 1JVQI 3DY0A 2RIVA 8APIA 1M93B 1JJOC 3Q02A 1YXAA 4P0FA 1BY7A 1LQ8A 1XU8A 3NE4A 2HIJI 2ACHA 2PEEA 5BRRI 2WXZC 4X30A 4DY7C 3CVMA 1SEKA 2WY1A 1DVNA 3H5CA 2R9YA 3DRUA 2ZNHA 1OVAC 5EI0A 9PAIA 1MTPA 1IZ2A 3NDFA 1JMOA 7APIA 1E03I 1OPHA 3UT3A 2V95A 3KCGI 2H4QA 2WXXA 9APIA 1JMJA 3DLWA 5CDXA 1D5SA 2H4PA 4DY0A 1K9OI 2BEHL 3CAAA 1DB2A 4GA7A 4ROBA 5IO1A 1NQ9I 2CEOA 4DTEA 3LE2A 1HLEA 1SR5A 3B9FI 1AZXI 3CWMA 2ZV6A 4RO9A 4P0OA 2DUTA 1DZHL 2HI9A 4ROAA 4CAAA 2OL2A 2ARRA 2BEHI 2XN7A 4ZK0A 3NDAA 4C49A 1XQGA 1WZ9A 2B5TI 4PYWA 1R1LI 4IF8A 1HP7A 1OC0A 3NDDA 1B3KA 3PZFA 4C41A 1SNGA 1ANTI 3CWLA 2B4XL 2VH4A 1DZHI 3STOA 2OAYA 2H4RA 4R9IA 1C5GA 2WY0C 2XN3A 4ZK3A 3DRMA 4AJUA 2VDXA 5CE0A 1OO8A 1LK6I 4BB2A 4G8RA 3F02A 1XQJA 3F5NA 4AFXA 4AU2A 1ATHA 1E05I 1JRRA 1QMBA 3PB1I 4KDSA 2GD4C 2B4XI 3F1SA 1IMVA 1QMNA 1ATTA 1DZGL 2XN5A 4Y3KA 3LW2A 1A7CA 2ANTI 2D26A 4AU3A 2HIJL 1F0CA 2PEFA 4G8OA 1AS4A 2VDYA 4Y40A 1UHGA 3Q03A 1QLPA 2WXZA 1BR8I 3EOXA 4AJTA 1ATUA 1KCTA 5CDZA 2WXWA 1DZGI 1OYHL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OVA A;  2WXY C;  3OZQ A;  4EB1 L;  5C98 A;  1E04 I;  2RIW A;  1DVM A;  1C8O A;  3VVJ A;  1EZX A;  4AU4 A;  1OVA B;  3R4L A;  5INW A;  2XN6 A;  5HGC A;  4IC0 A;  3FGQ A;  3ZHA A;  4AQH A;  1OYH I;  1LJ5 A;  1JTI A;  4RSQ A;  3T1P A;  1TB6 I;  4EB1 I;  1PSI A;  1T1F A;  3EVJ I;  4YIA A;  4AU3 B;  2QUG A;  2ARQ A;  1JVQ I;  3DY0 A;  2RIV A;  8API A;  1M93 B;  1JJO C;  3Q02 A;  1YXA A;  4P0F A;  1BY7 A;  1LQ8 A;  1XU8 A;  3NE4 A;  2HIJ I;  2ACH A;  2PEE A;  5BRR I;  2WXZ C;  4X30 A;  4DY7 C;  3CVM A;  1SEK A;  2WY1 A;  1DVN A;  3H5C A;  2R9Y A;  3DRU A;  2ZNH A;  1OVA C;  5EI0 A;  9PAI A;  1MTP A;  1IZ2 A;  3NDF A;  1JMO A;  7API A;  1E03 I;  1OPH A;  3UT3 A;  2V95 A;  3KCG I;  2H4Q A;  2WXX A;  9API A;  1JMJ A;  3DLW A;  5CDX A;  1D5S A;  2H4P A;  4DY0 A;  1K9O I;  2BEH L;  3CAA A;  1DB2 A;  4GA7 A;  4ROB A;  5IO1 A;  1NQ9 I;  2CEO A;  4DTE A;  3LE2 A;  1HLE A;  1SR5 A;  3B9F I;  1AZX I;  3CWM A;  2ZV6 A;  4RO9 A;  4P0O A;  2DUT A;  1DZH L;  2HI9 A;  4ROA A;  4CAA A;  2OL2 A;  2ARR A;  2BEH I;  2XN7 A;  4ZK0 A;  3NDA A;  4C49 A;  1XQG A;  1WZ9 A;  2B5T I;  4PYW A;  1R1L I;  4IF8 A;  1HP7 A;  1OC0 A;  3NDD A;  1B3K A;  3PZF A;  4C41 A;  1SNG A;  1ANT I;  3CWL A;  2B4X L;  2VH4 A;  1DZH I;  3STO A;  2OAY A;  2H4R A;  4R9I A;  1C5G A;  2WY0 C;  2XN3 A;  4ZK3 A;  3DRM A;  4AJU A;  2VDX A;  5CE0 A;  1OO8 A;  1LK6 I;  4BB2 A;  4G8R A;  3F02 A;  1XQJ A;  3F5N A;  4AFX A;  4AU2 A;  1ATH A;  1E05 I;  1JRR A;  1QMB A;  3PB1 I;  4KDS A;  2GD4 C;  2B4X I;  3F1S A;  1IMV A;  1QMN A;  1ATT A;  1DZG L;  2XN5 A;  4Y3K A;  3LW2 A;  1A7C A;  2ANT I;  2D26 A;  4AU3 A;  2HIJ L;  1F0C A;  2PEF A;  4G8O A;  1AS4 A;  2VDY A;  4Y40 A;  1UHG A;  3Q03 A;  1QLP A;  2WXZ A;  1BR8 I;  3EOX A;  4AJT A;  1ATU A;  1KCT A;  5CDZ A;  2WXW A;  1DZG I;  1OYH L; 
#chains in the Genus database with same CATH topology
 1OVA A;  2WXY C;  3OZQ A;  4EB1 L;  5C98 A;  1E04 I;  2RIW A;  1DVM A;  1C8O A;  3VVJ A;  1EZX A;  4AU4 A;  1OVA B;  3R4L A;  5INW A;  2XN6 A;  5HGC A;  4IC0 A;  3FGQ A;  3ZHA A;  4AQH A;  1OYH I;  1LJ5 A;  1JTI A;  4RSQ A;  3T1P A;  1TB6 I;  4EB1 I;  1PSI A;  1T1F A;  3EVJ I;  4YIA A;  4AU3 B;  2QUG A;  2ARQ A;  1JVQ I;  3DY0 A;  2RIV A;  8API A;  1M93 B;  1JJO C;  3Q02 A;  1YXA A;  4P0F A;  1BY7 A;  1LQ8 A;  1XU8 A;  3NE4 A;  2HIJ I;  2ACH A;  2PEE A;  5BRR I;  2WXZ C;  4X30 A;  4DY7 C;  3CVM A;  1SEK A;  2WY1 A;  1DVN A;  3H5C A;  2R9Y A;  3DRU A;  2ZNH A;  1OVA C;  5EI0 A;  9PAI A;  1MTP A;  1IZ2 A;  3NDF A;  1JMO A;  7API A;  1E03 I;  1OPH A;  3UT3 A;  2V95 A;  3KCG I;  2H4Q A;  2WXX A;  9API A;  1JMJ A;  3DLW A;  5CDX A;  1D5S A;  2H4P A;  4DY0 A;  1K9O I;  2BEH L;  3CAA A;  1DB2 A;  4GA7 A;  4ROB A;  5IO1 A;  1NQ9 I;  2CEO A;  4DTE A;  3LE2 A;  1HLE A;  1SR5 A;  3B9F I;  1AZX I;  3CWM A;  2ZV6 A;  4RO9 A;  4P0O A;  2DUT A;  1DZH L;  2HI9 A;  4ROA A;  4CAA A;  2OL2 A;  2ARR A;  2BEH I;  2XN7 A;  4ZK0 A;  3NDA A;  4C49 A;  1XQG A;  1WZ9 A;  2B5T I;  4PYW A;  1R1L I;  4IF8 A;  1HP7 A;  1OC0 A;  3NDD A;  1B3K A;  3PZF A;  4C41 A;  1SNG A;  1ANT I;  3CWL A;  2B4X L;  2VH4 A;  1DZH I;  3STO A;  2OAY A;  2H4R A;  4R9I A;  1C5G A;  2WY0 C;  2XN3 A;  4ZK3 A;  3DRM A;  4AJU A;  2VDX A;  5CE0 A;  1OO8 A;  1LK6 I;  4BB2 A;  4G8R A;  3F02 A;  1XQJ A;  3F5N A;  4AFX A;  4AU2 A;  1ATH A;  1E05 I;  1JRR A;  1QMB A;  3PB1 I;  4KDS A;  2GD4 C;  2B4X I;  3F1S A;  1IMV A;  1QMN A;  1ATT A;  1DZG L;  2XN5 A;  4Y3K A;  3LW2 A;  1A7C A;  2ANT I;  2D26 A;  4AU3 A;  2HIJ L;  1F0C A;  2PEF A;  4G8O A;  1AS4 A;  2VDY A;  4Y40 A;  1UHG A;  3Q03 A;  1QLP A;  2WXZ A;  1BR8 I;  3EOX A;  4AJT A;  1ATU A;  1KCT A;  5CDZ A;  2WXW A;  1DZG I;  1OYH L; 
#chains in the Genus database with same CATH homology
 1OVA A;  2WXY C;  3OZQ A;  4EB1 L;  5C98 A;  1E04 I;  2RIW A;  1DVM A;  1C8O A;  3VVJ A;  1EZX A;  4AU4 A;  1OVA B;  3R4L A;  5INW A;  2XN6 A;  5HGC A;  4IC0 A;  3FGQ A;  3ZHA A;  4AQH A;  1OYH I;  1LJ5 A;  1JTI A;  4RSQ A;  3T1P A;  1TB6 I;  4EB1 I;  1PSI A;  1T1F A;  3EVJ I;  4YIA A;  4AU3 B;  2QUG A;  2ARQ A;  1JVQ I;  3DY0 A;  2RIV A;  8API A;  1M93 B;  1JJO C;  3Q02 A;  1YXA A;  4P0F A;  1BY7 A;  1LQ8 A;  1XU8 A;  3NE4 A;  2HIJ I;  2ACH A;  2PEE A;  5BRR I;  2WXZ C;  4X30 A;  4DY7 C;  3CVM A;  1SEK A;  2WY1 A;  1DVN A;  3H5C A;  2R9Y A;  3DRU A;  2ZNH A;  1OVA C;  5EI0 A;  9PAI A;  1MTP A;  1IZ2 A;  3NDF A;  1JMO A;  7API A;  1E03 I;  1OPH A;  3UT3 A;  2V95 A;  3KCG I;  2H4Q A;  2WXX A;  9API A;  1JMJ A;  3DLW A;  5CDX A;  1D5S A;  2H4P A;  4DY0 A;  1K9O I;  2BEH L;  3CAA A;  1DB2 A;  4GA7 A;  4ROB A;  5IO1 A;  1NQ9 I;  2CEO A;  4DTE A;  3LE2 A;  1HLE A;  1SR5 A;  3B9F I;  1AZX I;  3CWM A;  2ZV6 A;  4RO9 A;  4P0O A;  2DUT A;  1DZH L;  2HI9 A;  4ROA A;  4CAA A;  2OL2 A;  2ARR A;  2BEH I;  2XN7 A;  4ZK0 A;  3NDA A;  4C49 A;  1XQG A;  1WZ9 A;  2B5T I;  4PYW A;  1R1L I;  4IF8 A;  1HP7 A;  1OC0 A;  3NDD A;  1B3K A;  3PZF A;  4C41 A;  1SNG A;  1ANT I;  3CWL A;  2B4X L;  2VH4 A;  1DZH I;  3STO A;  2OAY A;  2H4R A;  4R9I A;  1C5G A;  2WY0 C;  2XN3 A;  4ZK3 A;  3DRM A;  4AJU A;  2VDX A;  5CE0 A;  1OO8 A;  1LK6 I;  4BB2 A;  4G8R A;  3F02 A;  1XQJ A;  3F5N A;  4AFX A;  4AU2 A;  1ATH A;  1E05 I;  1JRR A;  1QMB A;  3PB1 I;  4KDS A;  2GD4 C;  2B4X I;  3F1S A;  1IMV A;  1QMN A;  1ATT A;  1DZG L;  2XN5 A;  4Y3K A;  3LW2 A;  1A7C A;  2ANT I;  2D26 A;  4AU3 A;  2HIJ L;  1F0C A;  2PEF A;  4G8O A;  1AS4 A;  2VDY A;  4Y40 A;  1UHG A;  3Q03 A;  1QLP A;  2WXZ A;  1BR8 I;  3EOX A;  4AJT A;  1ATU A;  1KCT A;  5CDZ A;  2WXW A;  1DZG I;  1OYH L; 
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