5CE0A

Crystal structure of conserpin with z-mutation
Total Genus 100
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
367
structure length
352
Chain Sequence
FQGAASSHKLAEANTDFAFSLYRELAKSSPDKNIFFSPVSISSALAMLSLGAKGDTHTQILEGLGFNSEADIHQGFQHLLQTLNRPKGLQLKTANGLFVDKSLKLLDSFLEDSKKLYQAEAFSVDFDPEEAKKQINDWVEKQTNGKIKDLLKDLDSDTVLVLVNAIYFKGKWKKPFDPENTKEEDFHVDEKTTVKVPMMSQKGKFYYYHDDELSCKVLELPYKGNASMLIILPDEGGLQHLEQSLTPETLSKWLKSLTRRSVELYLPKFKIEGTYDLKEVLSNLGITDLFSPGADLSGITEEKLYVSKAVHKAVLEVNPRSPPEFKADRPFLFLIRENKTGSILFMGKVVNP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords Native conserpin with Z-variant (E342K)
publication title Smoothing a rugged protein folding landscape by sequence-based redesign.
pubmed doi rcsb
source organism Synthetic construct
total genus 100
structure length 352
sequence length 367
chains with identical sequence B
ec nomenclature
pdb deposition date 2015-07-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 5ce0A02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 5ce0A01
4AFXA 1HP7A 4KDSA 2XN5A 2VH4A 2WXZC 3NDFA 9PAIA 1LJ5A 1BY7A 1AZXI 2ARQA 3Q02A 4P0OA 1D5SA 4ROBA 2HI9A 1OYHI 3CAAA 4ZK3A 1ATUA 3F5NA 4G8OA 1IZ2A 5INWA 2H4PA 3NDDA 1E03I 3NDAA 2XN7A 9APIA 3LW2A 2RIVA 1M93B 3DRUA 4DTEA 1TB6I 3VVJA 2ARRA 2BEHL 3CWLA 1JMOA 5CE0A 2WY0C 1SEKA 3KCGI 4RO9A 3F1SA 1F0CA 4DY7C 3EOXA 2WXYC 2HIJL 2VDXA 1SR5A 2WXZA 3OZQA 1JRRA 4C41A 1DZHL 5CDXA 1A7CA 1K9OI 5BRRI 5IO1A 3H5CA 1DZHI 2WY1A 1E05I 2PEEA 3PB1I 1SNGA 2DUTA 1ATTA 1E04I 3NE4A 4G8RA 4AU3B 1ATHA 1BR8I 1C8OA 1AS4A 1MTPA 2D26A 1YXAA 4PYWA 1C5GA 3Q03A 1LQ8A 1HLEA 2BEHI 1B3KA 2PEFA 3F02A 5CDZA 4Y40A 2H4QA 4EB1L 1JTIA 4X30A 4YIAA 4P0FA 7APIA 2XN6A 4CAAA 1IMVA 2ZV6A 2B4XL 2OAYA 2HIJI 1DVMA 1DB2A 1OVAC 2WXWA 4AU2A 4AU4A 4IF8A 1OVAA 3FGQA 2ZNHA 5C98A 4RSQA 1PSIA 1QMBA 1QLPA 2ACHA 4C49A 4DY0A 1QMNA 1OO8A 1OC0A 1T1FA 2XN3A 1JVQI 4R9IA 2OL2A 1XU8A 4ROAA 1XQGA 4AQHA 4ZK0A 2R9YA 1OYHL 1KCTA 1XQJA 3UT3A 1JJOC 3DY0A 1WZ9A 3B9FI 4AJUA 2ANTI 4EB1I 1DZGL 2RIWA 1R1LI 3CVMA 4AU3A 4IC0A 1UHGA 3LE2A 2WXXA 1DZGI 1LK6I 2B4XI 1NQ9I 3STOA 3R4LA 3DLWA 3DRMA 3CWMA 2GD4C 4Y3KA 1OVAB 1ANTI 3T1PA 5EI0A 4GA7A 8APIA 4BB2A 1DVNA 2CEOA 2V95A 2B5TI 3EVJI 4AJTA 1EZXA 5HGCA 1OPHA 2VDYA 3PZFA 2QUGA 3ZHAA 1JMJA 2H4RA
chains in the Genus database with same CATH superfamily
4AFXA 1HP7A 4KDSA 2XN5A 2VH4A 2WXZC 3NDFA 9PAIA 1LJ5A 1BY7A 1AZXI 2ARQA 3Q02A 4P0OA 1D5SA 4ROBA 2HI9A 1OYHI 3CAAA 4ZK3A 1ATUA 3F5NA 4G8OA 1IZ2A 5INWA 2H4PA 3NDDA 1E03I 3NDAA 2XN7A 9APIA 3LW2A 2RIVA 1M93B 3DRUA 4DTEA 1TB6I 3VVJA 2ARRA 2BEHL 3CWLA 1JMOA 5CE0A 2WY0C 1SEKA 3KCGI 4RO9A 3F1SA 1F0CA 4DY7C 3EOXA 2WXYC 2HIJL 2VDXA 1SR5A 2WXZA 3OZQA 1JRRA 4C41A 1DZHL 5CDXA 1A7CA 1K9OI 5BRRI 5IO1A 3H5CA 1DZHI 2WY1A 1E05I 2PEEA 3PB1I 1SNGA 2DUTA 1ATTA 1E04I 3NE4A 4G8RA 4AU3B 1ATHA 1BR8I 1C8OA 1AS4A 1MTPA 2D26A 1YXAA 4PYWA 1C5GA 3Q03A 1LQ8A 1HLEA 2BEHI 1B3KA 2PEFA 3F02A 5CDZA 4Y40A 2H4QA 4EB1L 1JTIA 4X30A 4YIAA 4P0FA 7APIA 2XN6A 4CAAA 1IMVA 2ZV6A 2B4XL 2OAYA 2HIJI 1DVMA 1DB2A 1OVAC 2WXWA 4AU2A 4AU4A 4IF8A 1OVAA 3FGQA 2ZNHA 5C98A 4RSQA 1PSIA 1QMBA 1QLPA 2ACHA 4C49A 4DY0A 1QMNA 1OO8A 1OC0A 1T1FA 2XN3A 1JVQI 4R9IA 2OL2A 1XU8A 4ROAA 1XQGA 4AQHA 4ZK0A 2R9YA 1OYHL 1KCTA 1XQJA 3UT3A 1JJOC 3DY0A 1WZ9A 3B9FI 4AJUA 2ANTI 4EB1I 1DZGL 2RIWA 1R1LI 3CVMA 4AU3A 4IC0A 1UHGA 3LE2A 2WXXA 1DZGI 1LK6I 2B4XI 1NQ9I 3STOA 3R4LA 3DLWA 3DRMA 3CWMA 2GD4C 4Y3KA 1OVAB 1ANTI 3T1PA 5EI0A 4GA7A 8APIA 4BB2A 1DVNA 2CEOA 2V95A 2B5TI 3EVJI 4AJTA 1EZXA 5HGCA 1OPHA 2VDYA 3PZFA 2QUGA 3ZHAA 1JMJA 2H4RA
chains in the Genus database with same CATH topology
4AFXA 1HP7A 4KDSA 2XN5A 2VH4A 2WXZC 3NDFA 9PAIA 1LJ5A 1BY7A 1AZXI 2ARQA 3Q02A 4P0OA 1D5SA 4ROBA 2HI9A 1OYHI 3CAAA 4ZK3A 1ATUA 3F5NA 4G8OA 1IZ2A 5INWA 2H4PA 3NDDA 1E03I 3NDAA 2XN7A 9APIA 3LW2A 2RIVA 1M93B 3DRUA 4DTEA 1TB6I 3VVJA 2ARRA 2BEHL 3CWLA 1JMOA 5CE0A 2WY0C 1SEKA 3KCGI 4RO9A 3F1SA 1F0CA 4DY7C 3EOXA 2WXYC 2HIJL 2VDXA 1SR5A 2WXZA 3OZQA 1JRRA 4C41A 1DZHL 5CDXA 1A7CA 1K9OI 5BRRI 5IO1A 3H5CA 1DZHI 2WY1A 1E05I 2PEEA 3PB1I 1SNGA 2DUTA 1ATTA 1E04I 3NE4A 4G8RA 4AU3B 1ATHA 1BR8I 1C8OA 1AS4A 1MTPA 2D26A 1YXAA 4PYWA 1C5GA 3Q03A 1LQ8A 1HLEA 2BEHI 1B3KA 2PEFA 3F02A 5CDZA 4Y40A 2H4QA 4EB1L 1JTIA 4X30A 4YIAA 4P0FA 7APIA 2XN6A 4CAAA 1IMVA 2ZV6A 2B4XL 2OAYA 2HIJI 1DVMA 1DB2A 1OVAC 2WXWA 4AU2A 4AU4A 4IF8A 1OVAA 3FGQA 2ZNHA 5C98A 4RSQA 1PSIA 1QMBA 1QLPA 2ACHA 4C49A 4DY0A 1QMNA 1OO8A 1OC0A 1T1FA 2XN3A 1JVQI 4R9IA 2OL2A 1XU8A 4ROAA 1XQGA 4AQHA 4ZK0A 2R9YA 1OYHL 1KCTA 1XQJA 3UT3A 1JJOC 3DY0A 1WZ9A 3B9FI 4AJUA 2ANTI 4EB1I 1DZGL 2RIWA 1R1LI 3CVMA 4AU3A 4IC0A 1UHGA 3LE2A 2WXXA 1DZGI 1LK6I 2B4XI 1NQ9I 3STOA 3R4LA 3DLWA 3DRMA 3CWMA 2GD4C 4Y3KA 1OVAB 1ANTI 3T1PA 5EI0A 4GA7A 8APIA 4BB2A 1DVNA 2CEOA 2V95A 2B5TI 3EVJI 4AJTA 1EZXA 5HGCA 1OPHA 2VDYA 3PZFA 2QUGA 3ZHAA 1JMJA 2H4RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AFX A;  1HP7 A;  4KDS A;  2XN5 A;  2VH4 A;  2WXZ C;  3NDF A;  9PAI A;  1LJ5 A;  1BY7 A;  1AZX I;  2ARQ A;  3Q02 A;  4P0O A;  1D5S A;  4ROB A;  2HI9 A;  1OYH I;  3CAA A;  4ZK3 A;  1ATU A;  3F5N A;  4G8O A;  1IZ2 A;  5INW A;  2H4P A;  3NDD A;  1E03 I;  3NDA A;  2XN7 A;  9API A;  3LW2 A;  2RIV A;  1M93 B;  3DRU A;  4DTE A;  1TB6 I;  3VVJ A;  2ARR A;  2BEH L;  3CWL A;  1JMO A;  5CE0 A;  2WY0 C;  1SEK A;  3KCG I;  4RO9 A;  3F1S A;  1F0C A;  4DY7 C;  3EOX A;  2WXY C;  2HIJ L;  2VDX A;  1SR5 A;  2WXZ A;  3OZQ A;  1JRR A;  4C41 A;  1DZH L;  5CDX A;  1A7C A;  1K9O I;  5BRR I;  5IO1 A;  3H5C A;  1DZH I;  2WY1 A;  1E05 I;  2PEE A;  3PB1 I;  1SNG A;  2DUT A;  1ATT A;  1E04 I;  3NE4 A;  4G8R A;  4AU3 B;  1ATH A;  1BR8 I;  1C8O A;  1AS4 A;  1MTP A;  2D26 A;  1YXA A;  4PYW A;  1C5G A;  3Q03 A;  1LQ8 A;  1HLE A;  2BEH I;  1B3K A;  2PEF A;  3F02 A;  5CDZ A;  4Y40 A;  2H4Q A;  4EB1 L;  1JTI A;  4X30 A;  4YIA A;  4P0F A;  7API A;  2XN6 A;  4CAA A;  1IMV A;  2ZV6 A;  2B4X L;  2OAY A;  2HIJ I;  1DVM A;  1DB2 A;  1OVA C;  2WXW A;  4AU2 A;  4AU4 A;  4IF8 A;  1OVA A;  3FGQ A;  2ZNH A;  5C98 A;  4RSQ A;  1PSI A;  1QMB A;  1QLP A;  2ACH A;  4C49 A;  4DY0 A;  1QMN A;  1OO8 A;  1OC0 A;  1T1F A;  2XN3 A;  1JVQ I;  4R9I A;  2OL2 A;  1XU8 A;  4ROA A;  1XQG A;  4AQH A;  4ZK0 A;  2R9Y A;  1OYH L;  1KCT A;  1XQJ A;  3UT3 A;  1JJO C;  3DY0 A;  1WZ9 A;  3B9F I;  4AJU A;  2ANT I;  4EB1 I;  1DZG L;  2RIW A;  1R1L I;  3CVM A;  4AU3 A;  4IC0 A;  1UHG A;  3LE2 A;  2WXX A;  1DZG I;  1LK6 I;  2B4X I;  1NQ9 I;  3STO A;  3R4L A;  3DLW A;  3DRM A;  3CWM A;  2GD4 C;  4Y3K A;  1OVA B;  1ANT I;  3T1P A;  5EI0 A;  4GA7 A;  8API A;  4BB2 A;  1DVN A;  2CEO A;  2V95 A;  2B5T I;  3EVJ I;  4AJT A;  1EZX A;  5HGC A;  1OPH A;  2VDY A;  3PZF A;  2QUG A;  3ZHA A;  1JMJ A;  2H4R A; 
#chains in the Genus database with same CATH topology
 4AFX A;  1HP7 A;  4KDS A;  2XN5 A;  2VH4 A;  2WXZ C;  3NDF A;  9PAI A;  1LJ5 A;  1BY7 A;  1AZX I;  2ARQ A;  3Q02 A;  4P0O A;  1D5S A;  4ROB A;  2HI9 A;  1OYH I;  3CAA A;  4ZK3 A;  1ATU A;  3F5N A;  4G8O A;  1IZ2 A;  5INW A;  2H4P A;  3NDD A;  1E03 I;  3NDA A;  2XN7 A;  9API A;  3LW2 A;  2RIV A;  1M93 B;  3DRU A;  4DTE A;  1TB6 I;  3VVJ A;  2ARR A;  2BEH L;  3CWL A;  1JMO A;  5CE0 A;  2WY0 C;  1SEK A;  3KCG I;  4RO9 A;  3F1S A;  1F0C A;  4DY7 C;  3EOX A;  2WXY C;  2HIJ L;  2VDX A;  1SR5 A;  2WXZ A;  3OZQ A;  1JRR A;  4C41 A;  1DZH L;  5CDX A;  1A7C A;  1K9O I;  5BRR I;  5IO1 A;  3H5C A;  1DZH I;  2WY1 A;  1E05 I;  2PEE A;  3PB1 I;  1SNG A;  2DUT A;  1ATT A;  1E04 I;  3NE4 A;  4G8R A;  4AU3 B;  1ATH A;  1BR8 I;  1C8O A;  1AS4 A;  1MTP A;  2D26 A;  1YXA A;  4PYW A;  1C5G A;  3Q03 A;  1LQ8 A;  1HLE A;  2BEH I;  1B3K A;  2PEF A;  3F02 A;  5CDZ A;  4Y40 A;  2H4Q A;  4EB1 L;  1JTI A;  4X30 A;  4YIA A;  4P0F A;  7API A;  2XN6 A;  4CAA A;  1IMV A;  2ZV6 A;  2B4X L;  2OAY A;  2HIJ I;  1DVM A;  1DB2 A;  1OVA C;  2WXW A;  4AU2 A;  4AU4 A;  4IF8 A;  1OVA A;  3FGQ A;  2ZNH A;  5C98 A;  4RSQ A;  1PSI A;  1QMB A;  1QLP A;  2ACH A;  4C49 A;  4DY0 A;  1QMN A;  1OO8 A;  1OC0 A;  1T1F A;  2XN3 A;  1JVQ I;  4R9I A;  2OL2 A;  1XU8 A;  4ROA A;  1XQG A;  4AQH A;  4ZK0 A;  2R9Y A;  1OYH L;  1KCT A;  1XQJ A;  3UT3 A;  1JJO C;  3DY0 A;  1WZ9 A;  3B9F I;  4AJU A;  2ANT I;  4EB1 I;  1DZG L;  2RIW A;  1R1L I;  3CVM A;  4AU3 A;  4IC0 A;  1UHG A;  3LE2 A;  2WXX A;  1DZG I;  1LK6 I;  2B4X I;  1NQ9 I;  3STO A;  3R4L A;  3DLW A;  3DRM A;  3CWM A;  2GD4 C;  4Y3K A;  1OVA B;  1ANT I;  3T1P A;  5EI0 A;  4GA7 A;  8API A;  4BB2 A;  1DVN A;  2CEO A;  2V95 A;  2B5T I;  3EVJ I;  4AJT A;  1EZX A;  5HGC A;  1OPH A;  2VDY A;  3PZF A;  2QUG A;  3ZHA A;  1JMJ A;  2H4R A; 
#chains in the Genus database with same CATH homology
 4AFX A;  1HP7 A;  4KDS A;  2XN5 A;  2VH4 A;  2WXZ C;  3NDF A;  9PAI A;  1LJ5 A;  1BY7 A;  1AZX I;  2ARQ A;  3Q02 A;  4P0O A;  1D5S A;  4ROB A;  2HI9 A;  1OYH I;  3CAA A;  4ZK3 A;  1ATU A;  3F5N A;  4G8O A;  1IZ2 A;  5INW A;  2H4P A;  3NDD A;  1E03 I;  3NDA A;  2XN7 A;  9API A;  3LW2 A;  2RIV A;  1M93 B;  3DRU A;  4DTE A;  1TB6 I;  3VVJ A;  2ARR A;  2BEH L;  3CWL A;  1JMO A;  5CE0 A;  2WY0 C;  1SEK A;  3KCG I;  4RO9 A;  3F1S A;  1F0C A;  4DY7 C;  3EOX A;  2WXY C;  2HIJ L;  2VDX A;  1SR5 A;  2WXZ A;  3OZQ A;  1JRR A;  4C41 A;  1DZH L;  5CDX A;  1A7C A;  1K9O I;  5BRR I;  5IO1 A;  3H5C A;  1DZH I;  2WY1 A;  1E05 I;  2PEE A;  3PB1 I;  1SNG A;  2DUT A;  1ATT A;  1E04 I;  3NE4 A;  4G8R A;  4AU3 B;  1ATH A;  1BR8 I;  1C8O A;  1AS4 A;  1MTP A;  2D26 A;  1YXA A;  4PYW A;  1C5G A;  3Q03 A;  1LQ8 A;  1HLE A;  2BEH I;  1B3K A;  2PEF A;  3F02 A;  5CDZ A;  4Y40 A;  2H4Q A;  4EB1 L;  1JTI A;  4X30 A;  4YIA A;  4P0F A;  7API A;  2XN6 A;  4CAA A;  1IMV A;  2ZV6 A;  2B4X L;  2OAY A;  2HIJ I;  1DVM A;  1DB2 A;  1OVA C;  2WXW A;  4AU2 A;  4AU4 A;  4IF8 A;  1OVA A;  3FGQ A;  2ZNH A;  5C98 A;  4RSQ A;  1PSI A;  1QMB A;  1QLP A;  2ACH A;  4C49 A;  4DY0 A;  1QMN A;  1OO8 A;  1OC0 A;  1T1F A;  2XN3 A;  1JVQ I;  4R9I A;  2OL2 A;  1XU8 A;  4ROA A;  1XQG A;  4AQH A;  4ZK0 A;  2R9Y A;  1OYH L;  1KCT A;  1XQJ A;  3UT3 A;  1JJO C;  3DY0 A;  1WZ9 A;  3B9F I;  4AJU A;  2ANT I;  4EB1 I;  1DZG L;  2RIW A;  1R1L I;  3CVM A;  4AU3 A;  4IC0 A;  1UHG A;  3LE2 A;  2WXX A;  1DZG I;  1LK6 I;  2B4X I;  1NQ9 I;  3STO A;  3R4L A;  3DLW A;  3DRM A;  3CWM A;  2GD4 C;  4Y3K A;  1OVA B;  1ANT I;  3T1P A;  5EI0 A;  4GA7 A;  8API A;  4BB2 A;  1DVN A;  2CEO A;  2V95 A;  2B5T I;  3EVJ I;  4AJT A;  1EZX A;  5HGC A;  1OPH A;  2VDY A;  3PZF A;  2QUG A;  3ZHA A;  1JMJ A;  2H4R A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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