1PT2A

Crystal structure of levansucrase (e342a) complexed with sucrose
Total Genus 136
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
136
sequence length
440
structure length
440
Chain Sequence
QKPYKETYGISHITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDEIARANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Bacillus subtilis
publication title Structural framework of fructosyl transfer in Bacillus subtilis levansucrase
pubmed doi rcsb
molecule keywords Levansucrase
total genus 136
structure length 440
sequence length 440
ec nomenclature ec 2.4.1.10: Levansucrase.
pdb deposition date 2003-06-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02435 Glyco_hydro_68 Levansucrase/Invertase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 1pt2A01
3QZ4A 4FFFA 4N1IA 2ADDA 5GLPA 5GLQA 1GYEB 3WMZA 4KMIA 5A8DA 4UDKE 2YFRA 3LF7A 2ADEA 4AK7A 3BYNA 1YIFA 5GLLA 5FMBA 5FK8A 3C7FA 4U6DA 3VSRA 3WPUA 4UDIA 5AYDA 2AC1A 4AK6A 2X8TA 5GLNA 3KF5A 1PT2A 3OM7A 4O8OA 1ST8A 3WPVA 3PIJA 4O8NA 4MLGA 2QQWA 3AKGA 5FKBA 2AEYA 3WPYA 5FK7A 3WN0A 3AKIA 3BYJA 1UV4A 4N2ZA 1W18A 3VT1A 3C2UA 4COTA 5FLWA 1YI7A 5JOZA 3LFIA 5JOYA 5B6TA 3K1UA 3P2NA 3WPZA 3WN1A 3U14A 3D5YA 2YFTA 3KSTA 1W2TA 3OM2A 5JOXA 4UDGA 3QEEA 5A8CA 4NOVA 3ZXLA 4UDJA 1GYHA 1GYDB 2X8SA 3CU9A 4FFGA 3C7GA 3VT2A 3UGHA 3LDKA 3UGFA 3VSZA 4AK5A 2XQRA 3WATA 3WN2A 4KCBA 3AKFA 5FMDA 4D47A 1Y9GA 1VKDA 5FMCA 3PIGA 4O8PA 3VT0A 4FFHA 2EXIA 3QC2A 4UDKA 3ZXJA 4U6BA 5AYEA 3C7HA 3OM4A 2YFSA 3LIHA 3UGGA 4QQSA 4KC7A 4N4BA 3R4ZA 3R67A 3KF3A 3LDRA 4ONZA 3R4YA 3WASA 1Y9MA 2EXJA 3SC7X 3C7EA 3D5ZA 2OXBA 1UYPA 5GLMA 5GLKA 5GLRA 4FFIA 1Y7BA 1YRZA 4N2RA 5AYCA 5A7VA 3QEDA 2VDTA 3LIGA 3U75A 5ANNA 5FKCA 2B4WA 3BYKA 5A7VB 2AEZA 3QEFA 4PVAA 3WAUA 4KC8A 1OYGA 3WMYA 4PVIA 2QQVA 1WL7A 3LV4A 3VSFA 3D60A 3TAWA 3LEMA 3AKHA 4KCAA 3BYLA 3ZXKA 3C7OA 3OM5A 5B6SA 2EXKA 5C0PA 2QQUA 3D61A 5GLOA 3RWKX 1Y4WA 3NQHA 4EQVA 5FIXA 5AY9A 3VSSA 5JOWA 3OM6A 2EXHA 2X8FA
chains in the Genus database with same CATH superfamily
3QZ4A 4FFFA 4N1IA 2ADDA 5GLPA 5GLQA 1GYEB 3WMZA 4KMIA 5A8DA 4UDKE 2YFRA 3LF7A 2ADEA 4AK7A 3BYNA 1YIFA 5GLLA 5FMBA 5FK8A 3C7FA 4U6DA 3VSRA 3WPUA 4UDIA 5AYDA 2AC1A 4AK6A 2X8TA 5GLNA 3KF5A 1PT2A 3OM7A 4O8OA 1ST8A 3WPVA 3PIJA 4O8NA 4MLGA 2QQWA 3AKGA 5FKBA 2AEYA 3WPYA 5FK7A 3WN0A 3AKIA 3BYJA 1UV4A 4N2ZA 1W18A 3VT1A 3C2UA 4COTA 5FLWA 1YI7A 5JOZA 3LFIA 5JOYA 5B6TA 3K1UA 3P2NA 3WPZA 3WN1A 3U14A 3D5YA 2YFTA 3KSTA 1W2TA 3OM2A 5JOXA 4UDGA 3QEEA 5A8CA 4NOVA 3ZXLA 4UDJA 1GYHA 1GYDB 2X8SA 3CU9A 4FFGA 3C7GA 3VT2A 3UGHA 3LDKA 3UGFA 3VSZA 4AK5A 2XQRA 3WATA 3WN2A 1TL2A 3AKFA 4KCBA 5FMDA 4D47A 1Y9GA 1VKDA 5FMCA 3PIGA 4O8PA 3VT0A 4FFHA 2EXIA 3QC2A 4UDKA 3ZXJA 4U6BA 5AYEA 3C7HA 3OM4A 2YFSA 3LIHA 3UGGA 4QQSA 4KC7A 4N4BA 3R4ZA 3R67A 3KF3A 3LDRA 4ONZA 3R4YA 3WASA 1Y9MA 2EXJA 3SC7X 3C7EA 3D5ZA 2OXBA 1UYPA 5GLMA 5GLKA 5GLRA 4FFIA 1Y7BA 1YRZA 4N2RA 5AYCA 5A7VA 3QEDA 2VDTA 3LIGA 3U75A 5ANNA 5FKCA 2B4WA 3BYKA 5A7VB 2AEZA 3QEFA 4PVAA 3WAUA 4KC8A 1OYGA 3WMYA 4PVIA 2QQVA 1WL7A 3LV4A 3VSFA 3D60A 3TAWA 3LEMA 3AKHA 4KCAA 3BYLA 3ZXKA 3C7OA 3OM5A 5B6SA 2EXKA 5C0PA 2QQUA 3D61A 5GLOA 3RWKX 1Y4WA 5C2MA 3NQHA 4EQVA 5FIXA 5AY9A 3VSSA 5JOWA 3OM6A 2EXHA 2X8FA
chains in the Genus database with same CATH topology
3QZ4A 4FFFA 4N1IA 2ADDA 5GLPA 5GLQA 1GYEB 3WMZA 4KMIA 5A8DA 4UDKE 2YFRA 3LF7A 2ADEA 4AK7A 3BYNA 1YIFA 5GLLA 5FMBA 5FK8A 3C7FA 4U6DA 3VSRA 3WPUA 4UDIA 5AYDA 2AC1A 4AK6A 2X8TA 5GLNA 3KF5A 1PT2A 3OM7A 4O8OA 1ST8A 3WPVA 3PIJA 4O8NA 4MLGA 2QQWA 3AKGA 5FKBA 2AEYA 3WPYA 5FK7A 3WN0A 3AKIA 3BYJA 1UV4A 4N2ZA 1W18A 3VT1A 3C2UA 4COTA 5FLWA 1YI7A 5JOZA 3LFIA 5JOYA 5B6TA 3K1UA 3P2NA 3WPZA 3WN1A 3U14A 3D5YA 2YFTA 3KSTA 1W2TA 3OM2A 5JOXA 4UDGA 3QEEA 5A8CA 4NOVA 3ZXLA 4UDJA 1GYHA 1GYDB 2X8SA 3CU9A 4FFGA 3C7GA 3VT2A 3UGHA 3LDKA 3UGFA 3VSZA 4AK5A 2XQRA 3WATA 3WN2A 4KCBA 3AKFA 5FMDA 4D47A 1Y9GA 1VKDA 5FMCA 3PIGA 4O8PA 3VT0A 4FFHA 2EXIA 3QC2A 4UDKA 3ZXJA 4U6BA 5AYEA 3C7HA 3OM4A 2YFSA 3LIHA 3UGGA 4QQSA 4KC7A 4N4BA 3R4ZA 3R67A 3KF3A 3LDRA 4ONZA 3R4YA 3WASA 1Y9MA 2EXJA 3SC7X 3C7EA 3D5ZA 2OXBA 1UYPA 5GLMA 5GLKA 5GLRA 4FFIA 1Y7BA 1YRZA 4N2RA 5AYCA 5A7VA 3QEDA 2VDTA 3LIGA 3U75A 5ANNA 5FKCA 2B4WA 3BYKA 5A7VB 2AEZA 3QEFA 4PVAA 3WAUA 4KC8A 1OYGA 3WMYA 4PVIA 2QQVA 1WL7A 3LV4A 3VSFA 3D60A 3TAWA 3LEMA 3AKHA 4KCAA 3BYLA 3ZXKA 3C7OA 3OM5A 5B6SA 2EXKA 5C0PA 2QQUA 3D61A 5GLOA 3RWKX 1Y4WA 3NQHA 4EQVA 5FIXA 5AY9A 3VSSA 5JOWA 3OM6A 2EXHA 2X8FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QZ4 A;  4FFF A;  4N1I A;  2ADD A;  5GLP A;  5GLQ A;  1GYE B;  3WMZ A;  4KMI A;  5A8D A;  4UDK E;  2YFR A;  3LF7 A;  2ADE A;  4AK7 A;  3BYN A;  1YIF A;  5GLL A;  5FMB A;  5FK8 A;  3C7F A;  4U6D A;  3VSR A;  3WPU A;  4UDI A;  5AYD A;  2AC1 A;  4AK6 A;  2X8T A;  5GLN A;  3KF5 A;  1PT2 A;  3OM7 A;  4O8O A;  1ST8 A;  3WPV A;  3PIJ A;  4O8N A;  4MLG A;  2QQW A;  3AKG A;  5FKB A;  2AEY A;  3WPY A;  5FK7 A;  3WN0 A;  3AKI A;  3BYJ A;  1UV4 A;  4N2Z A;  1W18 A;  3VT1 A;  3C2U A;  4COT A;  5FLW A;  1YI7 A;  5JOZ A;  3LFI A;  5JOY A;  5B6T A;  3K1U A;  3P2N A;  3WPZ A;  3WN1 A;  3U14 A;  3D5Y A;  2YFT A;  3KST A;  1W2T A;  3OM2 A;  5JOX A;  4UDG A;  3QEE A;  5A8C A;  4NOV A;  3ZXL A;  4UDJ A;  1GYH A;  1GYD B;  2X8S A;  3CU9 A;  4FFG A;  3C7G A;  3VT2 A;  3UGH A;  3LDK A;  3UGF A;  3VSZ A;  4AK5 A;  2XQR A;  3WAT A;  3WN2 A;  4KCB A;  3AKF A;  5FMD A;  4D47 A;  1Y9G A;  1VKD A;  5FMC A;  3PIG A;  4O8P A;  3VT0 A;  4FFH A;  2EXI A;  3QC2 A;  4UDK A;  3ZXJ A;  4U6B A;  5AYE A;  3C7H A;  3OM4 A;  2YFS A;  3LIH A;  3UGG A;  4QQS A;  4KC7 A;  4N4B A;  3R4Z A;  3R67 A;  3KF3 A;  3LDR A;  4ONZ A;  3R4Y A;  3WAS A;  1Y9M A;  2EXJ A;  3SC7 X;  3C7E A;  3D5Z A;  2OXB A;  1UYP A;  5GLM A;  5GLK A;  5GLR A;  4FFI A;  1Y7B A;  1YRZ A;  4N2R A;  5AYC A;  5A7V A;  3QED A;  2VDT A;  3LIG A;  3U75 A;  5ANN A;  5FKC A;  2B4W A;  3BYK A;  5A7V B;  2AEZ A;  3QEF A;  4PVA A;  3WAU A;  4KC8 A;  1OYG A;  3WMY A;  4PVI A;  2QQV A;  1WL7 A;  3LV4 A;  3VSF A;  3D60 A;  3TAW A;  3LEM A;  3AKH A;  4KCA A;  3BYL A;  3ZXK A;  3C7O A;  3OM5 A;  5B6S A;  2EXK A;  5C0P A;  2QQU A;  3D61 A;  5GLO A;  3RWK X;  1Y4W A;  3NQH A;  4EQV A;  5FIX A;  5AY9 A;  3VSS A;  5JOW A;  3OM6 A;  2EXH A;  2X8F A; 
#chains in the Genus database with same CATH topology
 3QZ4 A;  4FFF A;  4N1I A;  2ADD A;  5GLP A;  5GLQ A;  1GYE B;  3WMZ A;  4KMI A;  5A8D A;  4UDK E;  2YFR A;  3LF7 A;  2ADE A;  4AK7 A;  3BYN A;  1YIF A;  5GLL A;  5FMB A;  5FK8 A;  3C7F A;  4U6D A;  3VSR A;  3WPU A;  4UDI A;  5AYD A;  2AC1 A;  4AK6 A;  2X8T A;  5GLN A;  3KF5 A;  1PT2 A;  3OM7 A;  4O8O A;  1ST8 A;  3WPV A;  3PIJ A;  4O8N A;  4MLG A;  2QQW A;  3AKG A;  5FKB A;  2AEY A;  3WPY A;  5FK7 A;  3WN0 A;  3AKI A;  3BYJ A;  1UV4 A;  4N2Z A;  1W18 A;  3VT1 A;  3C2U A;  4COT A;  5FLW A;  1YI7 A;  5JOZ A;  3LFI A;  5JOY A;  5B6T A;  3K1U A;  3P2N A;  3WPZ A;  3WN1 A;  3U14 A;  3D5Y A;  2YFT A;  3KST A;  1W2T A;  3OM2 A;  5JOX A;  4UDG A;  3QEE A;  5A8C A;  4NOV A;  3ZXL A;  4UDJ A;  1GYH A;  1GYD B;  2X8S A;  3CU9 A;  4FFG A;  3C7G A;  3VT2 A;  3UGH A;  3LDK A;  3UGF A;  3VSZ A;  4AK5 A;  2XQR A;  3WAT A;  3WN2 A;  1TL2 A;  3AKF A;  4KCB A;  5FMD A;  4D47 A;  1Y9G A;  1VKD A;  5FMC A;  3PIG A;  4O8P A;  3VT0 A;  4FFH A;  2EXI A;  3QC2 A;  4UDK A;  3ZXJ A;  4U6B A;  5AYE A;  3C7H A;  3OM4 A;  2YFS A;  3LIH A;  3UGG A;  4QQS A;  4KC7 A;  4N4B A;  3R4Z A;  3R67 A;  3KF3 A;  3LDR A;  4ONZ A;  3R4Y A;  3WAS A;  1Y9M A;  2EXJ A;  3SC7 X;  3C7E A;  3D5Z A;  2OXB A;  1UYP A;  5GLM A;  5GLK A;  5GLR A;  4FFI A;  1Y7B A;  1YRZ A;  4N2R A;  5AYC A;  5A7V A;  3QED A;  2VDT A;  3LIG A;  3U75 A;  5ANN A;  5FKC A;  2B4W A;  3BYK A;  5A7V B;  2AEZ A;  3QEF A;  4PVA A;  3WAU A;  4KC8 A;  1OYG A;  3WMY A;  4PVI A;  2QQV A;  1WL7 A;  3LV4 A;  3VSF A;  3D60 A;  3TAW A;  3LEM A;  3AKH A;  4KCA A;  3BYL A;  3ZXK A;  3C7O A;  3OM5 A;  5B6S A;  2EXK A;  5C0P A;  2QQU A;  3D61 A;  5GLO A;  3RWK X;  1Y4W A;  5C2M A;  3NQH A;  4EQV A;  5FIX A;  5AY9 A;  3VSS A;  5JOW A;  3OM6 A;  2EXH A;  2X8F A; 
#chains in the Genus database with same CATH homology
 3QZ4 A;  4FFF A;  4N1I A;  2ADD A;  5GLP A;  5GLQ A;  1GYE B;  3WMZ A;  4KMI A;  5A8D A;  4UDK E;  2YFR A;  3LF7 A;  2ADE A;  4AK7 A;  3BYN A;  1YIF A;  5GLL A;  5FMB A;  5FK8 A;  3C7F A;  4U6D A;  3VSR A;  3WPU A;  4UDI A;  5AYD A;  2AC1 A;  4AK6 A;  2X8T A;  5GLN A;  3KF5 A;  1PT2 A;  3OM7 A;  4O8O A;  1ST8 A;  3WPV A;  3PIJ A;  4O8N A;  4MLG A;  2QQW A;  3AKG A;  5FKB A;  2AEY A;  3WPY A;  5FK7 A;  3WN0 A;  3AKI A;  3BYJ A;  1UV4 A;  4N2Z A;  1W18 A;  3VT1 A;  3C2U A;  4COT A;  5FLW A;  1YI7 A;  5JOZ A;  3LFI A;  5JOY A;  5B6T A;  3K1U A;  3P2N A;  3WPZ A;  3WN1 A;  3U14 A;  3D5Y A;  2YFT A;  3KST A;  1W2T A;  3OM2 A;  5JOX A;  4UDG A;  3QEE A;  5A8C A;  4NOV A;  3ZXL A;  4UDJ A;  1GYH A;  1GYD B;  2X8S A;  3CU9 A;  4FFG A;  3C7G A;  3VT2 A;  3UGH A;  3LDK A;  3UGF A;  3VSZ A;  4AK5 A;  2XQR A;  3WAT A;  3WN2 A;  4KCB A;  3AKF A;  5FMD A;  4D47 A;  1Y9G A;  1VKD A;  5FMC A;  3PIG A;  4O8P A;  3VT0 A;  4FFH A;  2EXI A;  3QC2 A;  4UDK A;  3ZXJ A;  4U6B A;  5AYE A;  3C7H A;  3OM4 A;  2YFS A;  3LIH A;  3UGG A;  4QQS A;  4KC7 A;  4N4B A;  3R4Z A;  3R67 A;  3KF3 A;  3LDR A;  4ONZ A;  3R4Y A;  3WAS A;  1Y9M A;  2EXJ A;  3SC7 X;  3C7E A;  3D5Z A;  2OXB A;  1UYP A;  5GLM A;  5GLK A;  5GLR A;  4FFI A;  1Y7B A;  1YRZ A;  4N2R A;  5AYC A;  5A7V A;  3QED A;  2VDT A;  3LIG A;  3U75 A;  5ANN A;  5FKC A;  2B4W A;  3BYK A;  5A7V B;  2AEZ A;  3QEF A;  4PVA A;  3WAU A;  4KC8 A;  1OYG A;  3WMY A;  4PVI A;  2QQV A;  1WL7 A;  3LV4 A;  3VSF A;  3D60 A;  3TAW A;  3LEM A;  3AKH A;  4KCA A;  3BYL A;  3ZXK A;  3C7O A;  3OM5 A;  5B6S A;  2EXK A;  5C0P A;  2QQU A;  3D61 A;  5GLO A;  3RWK X;  1Y4W A;  3NQH A;  4EQV A;  5FIX A;  5AY9 A;  3VSS A;  5JOW A;  3OM6 A;  2EXH A;  2X8F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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